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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005460.3.1
CDS Infomation

MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR)
Sequence

ATGGGAAGAACACCTTGTTGTGATAAAAATGGACTTAAAAAAGGGCCATGGACAACAGAA
GAAGATCAAAAGCTTATTGATTACATACAAAAATATGGCTCTGGAAATTGGAGGATTCTT
CCTAAGAATGCTGGGCTTCAAAGGTGTGGAAAGAGTTGCAGGCTACGTTGGATTAATTAT
CTAAGGCCAGATATTAAAAGAGGAAAATTCTCTTTTGAAGAAGAAGAGACAATCATCCAC
TTGCATAGTATTCTTGGAAACAAGTGGTCTGCTATTGCTGCTCGTCTGCCAGGAAGGACT
GATAACGAAATCAAAAATTATTGGAATACTAATATTCGAAAAAAGCTTTTGAGAATGGGA
ATTGATCCAATAACTCATAGCCCTCGTCTTGATCTTCTTGATTTAAACTCAATTTTCAAC
CCTTCACTCTACAATTCAACTCAATTGGACAATAATATTTCAAGGTTATTAGGTGTACAA
TCCCTAGTTAATCCTGAGATTTTGAGATTAGCCAATTCCCTTTTATCTTCTCACCACCAA
AACCAAAATTTCTTATTGCAAAGTAATTTTCAAGAAAATCAACTATGCAATTCATATGTC
CAAAACAAGTTGACCCCATTTGGCCAAACTAGCCTAATTCAAAACCCTATTAACAATATT
TCAACTTGTTCCAATTTTAATACTCCATCTGTTCCATTTTATAGTGACACTCTAGCCATG
CAACAACCTAATGTGGAGGAGCAATCATCATCGAATATTTTAAACTTCAACTCACAAAAT
TTTACCTTCAATTCTATTTTGCCAACTTTATCTACTCCATCGTCAACTCCAACTTCATTA
AATTCGAACTCTAGTACGATTTCGGAAGAAGAGAGGGAAAGTTATTGTAGCATGTTAAAC
TTTGATATTCCAAATATTTTAGATGTTAATGAATTTATGTAA

Peptide Sequence

PEP ID

Solyc10g005460.3.1
PEP Infomation

MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR)
Sequence

MGRTPCCDKNGLKKGPWTTEEDQKLIDYIQKYGSGNWRILPKNAGLQRCGKSCRLRWINY
LRPDIKRGKFSFEEEETIIHLHSILGNKWSAIAARLPGRTDNEIKNYWNTNIRKKLLRMG
IDPITHSPRLDLLDLNSIFNPSLYNSTQLDNNISRLLGVQSLVNPEILRLANSLLSSHHQ
NQNFLLQSNFQENQLCNSYVQNKLTPFGQTSLIQNPINNISTCSNFNTPSVPFYSDTLAM
QQPNVEEQSSSNILNFNSQNFTFNSILPTLSTPSSTPTSLNSNSSTISEEERESYCSMLN
FDIPNILDVNEFM*

Transcript Sequence

Transcript ID

Solyc10g005460.3.1
Transcript Infomation

MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR)
Sequence

CTAGTGTCAATCGATATAAAAATGTTTGATTACTTAAACAAATCTATTTTTTTTAATATA
TATATATATATAATTTCTTAAATGAGAAGGGACACGTAACCATAATGATCCCATTAAAAA
AAGGACGGTACCTGTTTCCTTTGACTTCGTAATTTTTGAAAATTGTTTTTCTCCATCCCT
ATATATATAGCACACAATATAATCCACATTATTATTTCAACAACACTAAATACTATTTTC
TTCTTTTGAATTTCTCATATATATATGTCTAACTATTGAGTATTGTTATTACTCAAAATA
ATAATAATTTATATTTACTTAATTATCACAATGGGAAGAACACCTTGTTGTGATAAAAAT
GGACTTAAAAAAGGGCCATGGACAACAGAAGAAGATCAAAAGCTTATTGATTACATACAA
AAATATGGCTCTGGAAATTGGAGGATTCTTCCTAAGAATGCTGGGCTTCAAAGGTGTGGA
AAGAGTTGCAGGCTACGTTGGATTAATTATCTAAGGCCAGATATTAAAAGAGGAAAATTC
TCTTTTGAAGAAGAAGAGACAATCATCCACTTGCATAGTATTCTTGGAAACAAGTGGTCT
GCTATTGCTGCTCGTCTGCCAGGAAGGACTGATAACGAAATCAAAAATTATTGGAATACT
AATATTCGAAAAAAGCTTTTGAGAATGGGAATTGATCCAATAACTCATAGCCCTCGTCTT
GATCTTCTTGATTTAAACTCAATTTTCAACCCTTCACTCTACAATTCAACTCAATTGGAC
AATAATATTTCAAGGTTATTAGGTGTACAATCCCTAGTTAATCCTGAGATTTTGAGATTA
GCCAATTCCCTTTTATCTTCTCACCACCAAAACCAAAATTTCTTATTGCAAAGTAATTTT
CAAGAAAATCAACTATGCAATTCATATGTCCAAAACAAGTTGACCCCATTTGGCCAAACT
AGCCTAATTCAAAACCCTATTAACAATATTTCAACTTGTTCCAATTTTAATACTCCATCT
GTTCCATTTTATAGTGACACTCTAGCCATGCAACAACCTAATGTGGAGGAGCAATCATCA
TCGAATATTTTAAACTTCAACTCACAAAATTTTACCTTCAATTCTATTTTGCCAACTTTA
TCTACTCCATCGTCAACTCCAACTTCATTAAATTCGAACTCTAGTACGATTTCGGAAGAA
GAGAGGGAAAGTTATTGTAGCATGTTAAACTTTGATATTCCAAATATTTTAGATGTTAAT
GAATTTATGTAATTTACTATTGTAAAGAAATATCACTCAAAAATTTGGAAGAACAAAAAA
AAAGCATTCTTTGATTATAATATGATCAATTATAGCTTGTCCTTTCTATATTTAAAAAAT
GATGTCCAATTATTAGTGTTAGATAGTAACACATG