Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005260.3.1
CDS Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

ATGCAACCGGCGGCAAGTTCAATGGTTCCACCACCAATGGCGGCGCAACCACAGTACCAA
CAGCAGTGGATGGCTCAGCAGCCGCAGTACCAGGTTCTGCCACCGCAGGCCGGTTATTAT
TACCAACCACCACCGCAGCAGGGTGGCGGAGTACCCCCACCGCAGCAGCAACAACAACAA
TCTCAGTACACGGCTTCAGCTCAGCCGACCAGTGCTGATGAAGTCCGGACGCTTTGGATT
GGAGATCTACAGTTTTGGATGGATGAGCAGTACCTATATAGTTGCTTCGCGCAAACTGGA
GAGGTGGTTTCCGCTAAAGTTATCCGCAACAAGCAAACTCAGCAATCAGAGGGTTATGGC
TTTATTGAGTTTAATAGTCATGCTGCTGCAGAAAGGAATCTACAAGCATACAATGGCACC
TTGATGCCTAATATTGAGCAAAATTTTAGGCTCAACTGGGCATCACTTGGTTCGGGTGAA
AAGCGTTCAGATAACACCCCTGAATATACAATATTTGTTGGAGACTTGGCAGCTGATGTC
ACAGATTACATGCTTCAGGAGACATTCAGACCCAATTATCCTTCAATCAAGGGTGCTAAG
GTTGTAACAGATAGGGCAACCGGGCACACAAAGGGTTATGGGTTTGTTAGATTTGGGGAT
GAGAGTGAGCAGTTACGAGCTATGACTGAGATGAATGGAAAGTTTTGCTCCACTAGGCCC
ATGCGCATTGGTCCTGCAGCTAACAAGAAGAATTCTGGTGGTCAGATGCAAGCTTCATAT
CAAAGTACTGGAACTCAAAATGAGGATGACCCTACTAATACGACGATTTTCGTTGGGAAC
TTGGATGCTAGTGTAACTGATGATCACCTCAGGCAGGTTTTTGGGAACTATGGGCAATTG
CTTCATGTAAAAATACCACTAGGCAAACGTTGTGGTTTTGTTCAATTTACTGATAGAAGC
TGTGCTGAGGAAGCTCTAAATGCATTGAGTGGAACTCAGTTGGGTGGACAAACCATCCGC
CTTTCATGGGGTCGTAGCCCTTCAAACAAGCAGCAGTCTCAGGGTGATCCGAACCAGTGG
AGTGGGGGTTATTATGGGTATACACCAGGATATGACGCCTATGGTTATGCCCAACCTACT
CAGGACCCAAATATGTACTATGCAGGCTATGCCGGGTATGGGAATTATGCACAACCTCCA
CATCAACAGCAACAAATGCCGCAGCAGCCTCAGTAA

Peptide Sequence

PEP ID

Solyc10g005260.3.1
PEP Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

MQPAASSMVPPPMAAQPQYQQQWMAQQPQYQVLPPQAGYYYQPPPQQGGGVPPPQQQQQQ
SQYTASAQPTSADEVRTLWIGDLQFWMDEQYLYSCFAQTGEVVSAKVIRNKQTQQSEGYG
FIEFNSHAAAERNLQAYNGTLMPNIEQNFRLNWASLGSGEKRSDNTPEYTIFVGDLAADV
TDYMLQETFRPNYPSIKGAKVVTDRATGHTKGYGFVRFGDESEQLRAMTEMNGKFCSTRP
MRIGPAANKKNSGGQMQASYQSTGTQNEDDPTNTTIFVGNLDASVTDDHLRQVFGNYGQL
LHVKIPLGKRCGFVQFTDRSCAEEALNALSGTQLGGQTIRLSWGRSPSNKQQSQGDPNQW
SGGYYGYTPGYDAYGYAQPTQDPNMYYAGYAGYGNYAQPPHQQQQMPQQPQ*

Transcript Sequence

Transcript ID

Solyc10g005260.3.1
Transcript Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

TTCTCGCTTCTTCCAATCTCCTCTCTCACATCATCCACATATTTTCCTCTAGGGTTTCAA
CACGATGCAACCGGCGGCAAGTTCAATGGTTCCACCACCAATGGCGGCGCAACCACAGTA
CCAACAGCAGTGGATGGCTCAGCAGCCGCAGTACCAGGTTCTGCCACCGCAGGCCGGTTA
TTATTACCAACCACCACCGCAGCAGGGTGGCGGAGTACCCCCACCGCAGCAGCAACAACA
ACAATCTCAGTACACGGCTTCAGCTCAGCCGACCAGTGCTGATGAAGTCCGGACGCTTTG
GATTGGAGATCTACAGTTTTGGATGGATGAGCAGTACCTATATAGTTGCTTCGCGCAAAC
TGGAGAGGTGGTTTCCGCTAAAGTTATCCGCAACAAGCAAACTCAGCAATCAGAGGGTTA
TGGCTTTATTGAGTTTAATAGTCATGCTGCTGCAGAAAGGAATCTACAAGCATACAATGG
CACCTTGATGCCTAATATTGAGCAAAATTTTAGGCTCAACTGGGCATCACTTGGTTCGGG
TGAAAAGCGTTCAGATAACACCCCTGAATATACAATATTTGTTGGAGACTTGGCAGCTGA
TGTCACAGATTACATGCTTCAGGAGACATTCAGACCCAATTATCCTTCAATCAAGGGTGC
TAAGGTTGTAACAGATAGGGCAACCGGGCACACAAAGGGTTATGGGTTTGTTAGATTTGG
GGATGAGAGTGAGCAGTTACGAGCTATGACTGAGATGAATGGAAAGTTTTGCTCCACTAG
GCCCATGCGCATTGGTCCTGCAGCTAACAAGAAGAATTCTGGTGGTCAGATGCAAGCTTC
ATATCAAAGTACTGGAACTCAAAATGAGGATGACCCTACTAATACGACGATTTTCGTTGG
GAACTTGGATGCTAGTGTAACTGATGATCACCTCAGGCAGGTTTTTGGGAACTATGGGCA
ATTGCTTCATGTAAAAATACCACTAGGCAAACGTTGTGGTTTTGTTCAATTTACTGATAG
AAGCTGTGCTGAGGAAGCTCTAAATGCATTGAGTGGAACTCAGTTGGGTGGACAAACCAT
CCGCCTTTCATGGGGTCGTAGCCCTTCAAACAAGCAGCAGTCTCAGGGTGATCCGAACCA
GTGGAGTGGGGGTTATTATGGGTATACACCAGGATATGACGCCTATGGTTATGCCCAACC
TACTCAGGACCCAAATATGTACTATGCAGGCTATGCCGGGTATGGGAATTATGCACAACC
TCCACATCAACAGCAACAAATGCCGCAGCAGCCTCAGTAATCTGCTGGTCAAAGGAATTG
GTGAGAGTACTTGGTTGATCTCGGGATTCGGATTCTCATTAGCTCCAACCTCTAGAGCAG
GGGAAACAGAGTTAAGTTCAGCAAATAGAGTACTTTGATTGAATTGATTCTGTGGGTTTT
CTTGTCCGCCATGAGTCCATTGTTTTAGCTGAATCTCTTCATTCATTGGAGGAAGCCCTT
GGGAGGAGTAGAGTTGAGTTTGAGCGTTTACAGGAGGAGACTGGTGGATCTCAAGTTTCT
TGGCTGCACAGTGAACCAACTCTCCAGGCTGGAGTAAAGTTTGGATATACGACTGCTCAG
GATTCGGTTGCTTATCATTCTTGGATTCAGATTCAATCTGGTGGTTGTCTAACGCCTCTT
GAGACTTAGACACAACAGGATTATGATGAATTTCACCACTTGGGCTGTTAAGGTTACCAT
GAAAAAGAATGTCAGACTGAAACATTGAGCCCATGAGTTGGTTTTGAGCTTTTTGTACCT
GATTGCTAGTTCCGTCACTACCTTTTGGTTCCAATATGGATTCTTCAACCATTTTAGTAG
TCCCTTCTGATTGGTTCGGGATTTCAAATACCCGCATCACTTCATCCTTTTCAACCATTC
TAAGATTTTCCACCGGAATGGTAAGATGGGATTGGTGGATTTGGACTCTTTGATCTTGAT
TTGGCTGCTGCAGCATGACTTTTTCACCCAAGGTTGAAGTCACGTTGCATCGTCCCTCGT
TAGGTGCCATAACAGGAGGAAATTGGTTGGTATTTGGTATAAATGGAGCAGTTGACATTG
GGTTCGAAGTTAAAACTTGTTGTCCTGGTGCCACATTTGGCTGTTGTTCTTGCTGAAGCT
GGTTTATAGCAACTTGATTCCTGTGATACATTGTAGCTGATGGGGCAACATCATTTGCTG
GTGTAATTGGGGCAAATCTCCCTGGCTGGAAGACTAATCCACGGAGCGTGCTGCTGCTAT
TACCAACCCTCACCGTAATGAAGTACCCTGCATCAAAACGACCATCAACGACACCAGAAA
CCATCTGTCCTACACCGTTGTTACTGCCAATAATGCCATCTTTTTGGTTTACTTCAACAG
CATTTCGTTGAACTTTCTTGATGTTTTCGGGTGCTGGAGCTGTCATCGCTGCTGACTGCA
AATTCCCTCTCTTGGCAACACCTCCATCTTTGCGTGGCCGTCCACGCCTTCGCTTTGCTG
GAAGGATTGTTGGAGCAGAGGGATTGTTATCTTGTGTAGCTTGCTCATTCATCCTGAAAA
ATCTAACTTTTGAGTGTTTTATACAAGCACTTTGTATTCACTTCACTTTAAGTGGTGAAT
GCATAAAATATATTAATAAAAGCTTGTACTTCACCAGAAATCATCTTTAGTGGAGATATT
CATCATGATCCTTTTGAATC