Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005100.3.1
CDS Infomation

plasma-membrane associated cation-binding protein 1 (AHRD V3.3 *** AT4G20260.6)
Sequence

ATGGGATACTGGAAAGCAAAGGTTCTTCCAAAGATCAAGCAGATCTTTGATAAAAATGGA
CCCAAGAAAACTGCTGCTGCTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGAATAT
AGCAAGGAGTTTGAAGAGAAGAAGACTGAGCTTCAACCCAAAGTTGTTGAAATTTATGAA
GCTGCTGCAGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAA
AACTCAGATGGGGTTCAGAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCA
AAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCCCAATTATT
TTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCC
GCGGCTGCTGATGACGTGCATGCACCAGCCGCCACGTCAACTGAAGAGGTGGAGGTGAAG
GTGAAGGAGAAGGAGAAGGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCA
CCTGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAAGGTGGAAGAAGCACCAAAGGTG
GTTTAA

Peptide Sequence

PEP ID

Solyc10g005100.3.1
PEP Infomation

plasma-membrane associated cation-binding protein 1 (AHRD V3.3 *** AT4G20260.6)
Sequence

MGYWKAKVLPKIKQIFDKNGPKKTAAAEACKTFDQAKEEYSKEFEEKKTELQPKVVEIYE
AAAVEIKSLVKEPKGAGLKKNSDGVQKFLDDLVKIEFPGSKAVSEASSNFGPSYVSGPII
FVFEKVSTFIVTEDKKEEEPAAADDVHAPAATSTEEVEVKVKEKEKEIVIESGEPNKEEA
PATVVADVAPATKVEEAPKVV*

Transcript Sequence

Transcript ID

Solyc10g005100.3.1
Transcript Infomation

plasma-membrane associated cation-binding protein 1 (AHRD V3.3 *** AT4G20260.6)
Sequence

GAAGCACAGTTGGCTAACAAATAGAAAAGTTTTTTTTTTGAATTGTCCACTCATATATAA
CAACAGTTATCTGTTATTATTATTAGAGAGCAAATATATAATTGCAAACAAAGAAGAGAG
ATATTTCAGTTTGCTTTCTTCATATTCATATATTTTGTGAGTATTTAATACGAAAGAAAT
AAAGATGGGATACTGGAAAGCAAAGGTTCTTCCAAAGATCAAGCAGATCTTTGATAAAAA
TGGACCCAAGAAAACTGCTGCTGCTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGA
ATATAGCAAGGAGTTTGAAGAGAAGAAGACTGAGCTTCAACCCAAAGTTGTTGAAATTTA
TGAAGCTGCTGCAGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAA
GAAAAACTCAGATGGGGTTCAGAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGG
ATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCCCAAT
TATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGA
ACCCGCGGCTGCTGATGACGTGCATGCACCAGCCGCCACGTCAACTGAAGAGGTGGAGGT
GAAGGTGAAGGAGAAGGAGAAGGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGA
AGCACCTGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAAGGTGGAAGAAGCACCAAA
GGTGGTTTAATCATCGTATACGTCTAAAAATTTGCATCTTTATCTTCTTCTTTTTTTTAA
TGTGTCATGGTTATTTACTGTGAGAAAAACTTGATTTATTATTCTTTTGTTAGTGTTTCT
CTCCTTGTTTATTTTCTTTGTACCATATTATCTCATCAACAAAGTCTTTGTGTATTTTTA
TTGATTCTTTATCTCATTTCATTCTTCAATACTCTAGTAATTAAGATGTTTATATAAGTC
GATTTGATTTGA