Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005000.3.1
CDS Infomation

SUN-like protein 27
Sequence

ATGGGAAATAACAAAAAAGGATCATCTTCTTCTTGGTTAAGTGCTGTTAAGAGAGCTTTT
AGATCGAAGAAGCAAATTAATGAGGAAGAAAAGAAGAAGGAAAATCAAAGGAAGCAGCAG
CATACTACTAATCATAATGCTGCAGCTCAGGCTGCCACTATTATTCAAACAGCTTTCAGG
GGATATTTGGCAAGAAGGGCTCTAAAAGCACTAAAAGGTCTAGTGAAATTGCAAGCTTTA
GTGAGAGGTCACAATGTTAGGAAACAAGCCAAGATGACTCTCAAATGCATGCAAGCTCTT
GTTAGAGTTCAAGCACGGGTATTGGACCAGCGATTTAGGCAATCGGAGCAAGCAAGTAGA
AAATCAGACACCACTACCTCCCACCAACATATGTCAAGCACTATTCCTGATGATTGGGAT
GAAAGGCCTCATACTATCGAAGAGGTAAAAGCAATGCTGCAAAAGAGAAAAGAAGCTGCT
TTCATGAAGTGCCAAGGGACCCCCTTTTCTCAACAGACAAGGAGAAGTGGCAGAAGTTCC
TCGATAGGAAGTGATGCGGATTTTGGAGAAAAAAGGGCGGCTGCAAAATCATGGGACAGT
AGTAGTAGAGGCAGAGCATCAACTTATCCTGTCGAAATGGATACATCACAACGTAATTTA
ATAACAAGATTACACCAACGACCAACTTCACCCCTTCATACATCTTTTCAATTCCCCGTT
ACACCTTCTCCATCCAAATCAACAAGACCTATTCAAGTACGCTCTGCTAGTCCAAGACAT
GACAAAAAATCTCAAACTCCAAGCCTGAGGCCTAATAATAACTACTCCTCATACCAACCT
AATAGACTAACTTCTAGTGCTGCAGCAATTCCTAACTACATGGCTGCTACCGAGTCTGCT
TTGGCAAGAATTCGTTCACAAAGTGCCCCACGACAGAGACCATCGACTCCAGAGAGGGAT
CGAGCTGGATCAGCTAAGAAACGACTTTCTTTCCCTGTCCCTGACCGTTATGGGAATGTC
CCATCAGCCTATGGACACAATCTTAGGAGTCCAAGCTTTAAGAGCCTTAGTGGAGTACAT
TTCGGATATGAACAACAGTCTAACTATTCTTCGTGTTACACGGAGAGTATTGGTGGTGAG
ATCTCTCCATCCTCAACTAGCGATTTCCGAAGGTATTTAAGATGA

Peptide Sequence

PEP ID

Solyc10g005000.3.1
PEP Infomation

SUN-like protein 27
Sequence

MGNNKKGSSSSWLSAVKRAFRSKKQINEEEKKKENQRKQQHTTNHNAAAQAATIIQTAFR
GYLARRALKALKGLVKLQALVRGHNVRKQAKMTLKCMQALVRVQARVLDQRFRQSEQASR
KSDTTTSHQHMSSTIPDDWDERPHTIEEVKAMLQKRKEAAFMKCQGTPFSQQTRRSGRSS
SIGSDADFGEKRAAAKSWDSSSRGRASTYPVEMDTSQRNLITRLHQRPTSPLHTSFQFPV
TPSPSKSTRPIQVRSASPRHDKKSQTPSLRPNNNYSSYQPNRLTSSAAAIPNYMAATESA
LARIRSQSAPRQRPSTPERDRAGSAKKRLSFPVPDRYGNVPSAYGHNLRSPSFKSLSGVH
FGYEQQSNYSSCYTESIGGEISPSSTSDFRRYLR*

Transcript Sequence

Transcript ID

Solyc10g005000.3.1
Transcript Infomation

SUN-like protein 27
Sequence

GAAAACATTGAAGAGAGAGAGAGAGAGAGTGAGTAGTAGTAGTTGTCCCTGTCAACTCTT
GTATGTTTAAATAAAAGTGGAGTAATAAATAATGTTGTGTTCAAAGGTGCTGGCTGACAC
CACCCACTCACCCATTCACACTAAAAATGTCTCTCTCAGTTTGAGTACATTAATTCTATG
GGAAATAACAAAAAAGGATCATCTTCTTCTTGGTTAAGTGCTGTTAAGAGAGCTTTTAGA
TCGAAGAAGCAAATTAATGAGGAAGAAAAGAAGAAGGAAAATCAAAGGAAGCAGCAGCAT
ACTACTAATCATAATGCTGCAGCTCAGGCTGCCACTATTATTCAAACAGCTTTCAGGGGA
TATTTGGCAAGAAGGGCTCTAAAAGCACTAAAAGGTCTAGTGAAATTGCAAGCTTTAGTG
AGAGGTCACAATGTTAGGAAACAAGCCAAGATGACTCTCAAATGCATGCAAGCTCTTGTT
AGAGTTCAAGCACGGGTATTGGACCAGCGATTTAGGCAATCGGAGCAAGCAAGTAGAAAA
TCAGACACCACTACCTCCCACCAACATATGTCAAGCACTATTCCTGATGATTGGGATGAA
AGGCCTCATACTATCGAAGAGGTAAAAGCAATGCTGCAAAAGAGAAAAGAAGCTGCTTTC
ATGAAGTGCCAAGGGACCCCCTTTTCTCAACAGACAAGGAGAAGTGGCAGAAGTTCCTCG
ATAGGAAGTGATGCGGATTTTGGAGAAAAAAGGGCGGCTGCAAAATCATGGGACAGTAGT
AGTAGAGGCAGAGCATCAACTTATCCTGTCGAAATGGATACATCACAACGTAATTTAATA
ACAAGATTACACCAACGACCAACTTCACCCCTTCATACATCTTTTCAATTCCCCGTTACA
CCTTCTCCATCCAAATCAACAAGACCTATTCAAGTACGCTCTGCTAGTCCAAGACATGAC
AAAAAATCTCAAACTCCAAGCCTGAGGCCTAATAATAACTACTCCTCATACCAACCTAAT
AGACTAACTTCTAGTGCTGCAGCAATTCCTAACTACATGGCTGCTACCGAGTCTGCTTTG
GCAAGAATTCGTTCACAAAGTGCCCCACGACAGAGACCATCGACTCCAGAGAGGGATCGA
GCTGGATCAGCTAAGAAACGACTTTCTTTCCCTGTCCCTGACCGTTATGGGAATGTCCCA
TCAGCCTATGGACACAATCTTAGGAGTCCAAGCTTTAAGAGCCTTAGTGGAGTACATTTC
GGATATGAACAACAGTCTAACTATTCTTCGTGTTACACGGAGAGTATTGGTGGTGAGATC
TCTCCATCCTCAACTAGCGATTTCCGAAGGTATTTAAGATGACCAAACGGAAAAAATAAG
GTGATCAATAATGTACATGCTAATGCATATTGTAACTGTACTGCCTTTTTCTTGTTTGTT
TGTTTGGAGTGTTATTTTTTACATTCCTTGCTCCCTTGAGATTTCCTCCTAACTTGTAAT
GTATTTGAACCCATTGATGTGTTGGTCAAACCTATTGTAACTAGTTCTGCAAGCATTATT
TAGTGAAACAACACTTAAAAGGATTTTAACAACTCAGTTGGTTAACTATTTGAATTTTTA
CGACTATCTTAATTTTCACGTGCCCTCAATGTTATAGTGCTAACTTTGATGTGATCACTA
CTTACATGTGTTTATTC