Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g098390.3.1
CDS Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT2G43370.1)
Sequence

ATGGCTGGAGAAGAGGTGAAGGGAAAGAGGTGTGGTGCCAATCTGAATTCAGTATTCTAT
GCAGAATCATACCATCCAATTCAAGCTGGAAGCATCGATGGCACTGACATCCTTCCACAT
GATAACGCCATTTACAGAGCTCTTCTTGGCTCTAATGCCGGATTGTATGACCCTTTTGGT
GACCCAAAGGCTATTGGTGATCCTTATTCTACTCTCTTTGTTGGCCATTTGTCTCACTTG
ACCACTGAACACACTCTTCAAAAGGAAATGAACAAGTATGGAAAGGTGAAGAACTTAAGA
ATTGTTAGACACATTGTAACAGGTGCTTCACGCGGTTATGCATTTGTGGAATTTGAAACT
GATAGAGAAATGCGTCGAGCATACACGGATGCTCATCATAAGGTTATTGATGATTCTGAA
ATAATAGTGGACTACAACAGGCAAAGGTTAATGTCAGGCTGGATTCCAAGAAGATTAGGA
GGTGGTCTTGGCGGAAAGAAGGAATCAGGGCAACTTCGTTTTGGAGGTCGTGAAAGACCA
TTTCGTGCTCCACTACGGCCAATTCCGTGGGATGATTTAAAGAGGCTTGGTATACCACCT
CCTCCTGAGGGAAGATACATGTCACGCTTTCAGGCTCCATCACCACCCAGGCGAGCAAGA
AGCTTGGAGGATGCTGGAGACTCTTCTCACAAGCATGATAAAAGAAGCAACCATTCTCAT
CGACAGGACAGGTCAATAAGTCGAGAGCGCTCATCTGGAAGACAGGAGAGGTCCATGGAC
ATGGAAGATTTCTCTCATAGACAGAGAACACATGAAAAGAAACGAGGTGATCGAAGATCC
CCCAGCCATGATTATTCATCAGATAGGAGTTCAATGGACAGAAGCAGACATTCTCGGATG
CGTCAAAAGAGTAGCAGAGACAGGCAAGACATGAAATCTCCCAGTCTTGATCATTCATCT
GATGAAACTTCAAAGTACAGAGAACAACGCCGTCAATCACACAATGCACGGTCTCATGGA
GACGACAGATGGTCGCCAAGAACAGATGATCCATTTGGTGAGACTTAA

Peptide Sequence

PEP ID

Solyc09g098390.3.1
PEP Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT2G43370.1)
Sequence

MAGEEVKGKRCGANLNSVFYAESYHPIQAGSIDGTDILPHDNAIYRALLGSNAGLYDPFG
DPKAIGDPYSTLFVGHLSHLTTEHTLQKEMNKYGKVKNLRIVRHIVTGASRGYAFVEFET
DREMRRAYTDAHHKVIDDSEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERP
FRAPLRPIPWDDLKRLGIPPPPEGRYMSRFQAPSPPRRARSLEDAGDSSHKHDKRSNHSH
RQDRSISRERSSGRQERSMDMEDFSHRQRTHEKKRGDRRSPSHDYSSDRSSMDRSRHSRM
RQKSSRDRQDMKSPSLDHSSDETSKYREQRRQSHNARSHGDDRWSPRTDDPFGET*

Transcript Sequence

Transcript ID

Solyc09g098390.3.1
Transcript Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT2G43370.1)
Sequence

AACCGGAAGAAGAGAGTCATAGCGACAAGCCAACAACCAAATACTAATGTGATTATTGAA
GCAAAGGAAAAAAAGACATGTAACAGTAATCAAATTGGAAAATAAAATAATTAATAGGAG
AATAATATTTATAATTACCATTTTCTTATTTTGAGAGGGTAACTATTATAGAAAAGTCGA
ATATAAGATGTAATTAGGGTCAGTTATTATTTGAGGAAGAAACGATAAAAATAAATACAC
AAGGATAACTAAGACCAAAAATCTAAATAAAACACATTAAATTTAGAAAGATATGTTTTA
AGTGTATAATTCCCTTGATTCTTAGAAGTGTATCTGGTAATTTGGTCGATCAAAGTTGAT
ATTAGTTATGCATACCTTAACATTTTTTACTTTGTTTTGAAGCAAGACTCTCATATCAAG
AGAGCACTCAATTTCTCAAAATTAAGTTGAGATTATGTAAAAGAGGATAAATTCAGCAAT
TATTTGATATAATCCAAGTAGCCCCCAAAAGTAGAATTGATTGAATGGCTGGAGAAGAGG
TGAAGGGAAAGAGGTGTGGTGCCAATCTGAATTCAGTATTCTATGCAGAATCATACCATC
CAATTCAAGCTGGAAGCATCGATGGCACTGACATCCTTCCACATGATAACGCCATTTACA
GAGCTCTTCTTGGCTCTAATGCCGGATTGTATGACCCTTTTGGTGACCCAAAGGCTATTG
GTGATCCTTATTCTACTCTCTTTGTTGGCCATTTGTCTCACTTGACCACTGAACACACTC
TTCAAAAGGAAATGAACAAGTATGGAAAGGTGAAGAACTTAAGAATTGTTAGACACATTG
TAACAGGTGCTTCACGCGGTTATGCATTTGTGGAATTTGAAACTGATAGAGAAATGCGTC
GAGCATACACGGATGCTCATCATAAGGTTATTGATGATTCTGAAATAATAGTGGACTACA
ACAGGCAAAGGTTAATGTCAGGCTGGATTCCAAGAAGATTAGGAGGTGGTCTTGGCGGAA
AGAAGGAATCAGGGCAACTTCGTTTTGGAGGTCGTGAAAGACCATTTCGTGCTCCACTAC
GGCCAATTCCGTGGGATGATTTAAAGAGGCTTGGTATACCACCTCCTCCTGAGGGAAGAT
ACATGTCACGCTTTCAGGCTCCATCACCACCCAGGCGAGCAAGAAGCTTGGAGGATGCTG
GAGACTCTTCTCACAAGCATGATAAAAGAAGCAACCATTCTCATCGACAGGACAGGTCAA
TAAGTCGAGAGCGCTCATCTGGAAGACAGGAGAGGTCCATGGACATGGAAGATTTCTCTC
ATAGACAGAGAACACATGAAAAGAAACGAGGTGATCGAAGATCCCCCAGCCATGATTATT
CATCAGATAGGAGTTCAATGGACAGAAGCAGACATTCTCGGATGCGTCAAAAGAGTAGCA
GAGACAGGCAAGACATGAAATCTCCCAGTCTTGATCATTCATCTGATGAAACTTCAAAGT
ACAGAGAACAACGCCGTCAATCACACAATGCACGGTCTCATGGAGACGACAGATGGTCGC
CAAGAACAGATGATCCATTTGGTGAGACTTAATATCAGGAAGAACATCATAGACCACATA
CTAAGCACTCATATGGTGGTGATGGGCGATGGTCCCCTAGCCGAGATGTACCTTTTGATG
AAGCTTCTATTCGAGAACATGAACCACTTTCATAGTAGTAAAACTCGTGGATGAGTGAGA
CTATATGAATATTTTTGTTAGATGGTTTCCCCTTGAGTTCTAGCTTAGATAGCTTAGACT
GAAGATTTGTAGTTTTGCTAGAGTAATTTTATCAGGATGACTCCCCAATAGTATGTTAAA
GCACTCTATTCCCCAGATTCTGGAAATGTTGTAAAACATAAACAATCTTGCTTCAAAAAT
GTTTTGTTTTGTTCGTATTATCTGTCTCTTTAAGATTTTTGCACACCCCTTAAAAGAAAA
ATACTATATAGCATTAAATTATCCTGAAGCATATCTCTTGTTTGAAGACAAGTAGTAGTA
AACACAATGATGAAGCATATATACATCCAAGTAACTTATTCATCTGCTCATTTCTGAGTT
GACTTAAAAGCTTTAAACATAAAGTACAAAAATCATAGTGTAAGAAAATTCAAGATGTAG
CTGCACCAAGCAAGCGAAGAACAAGATGAAGAGTGGACTCTCTTTTGATGTCATAATCTT
TCACAGTACCATTTTCCAGTTGCTTGCCACCAAATATTAACCTCTGATGTTCTGCTTTTA
TCCCTGTTTTTTCATAGATTTTGTCTTTCACACTATCAATGGTGTCAGAGGTTTCCACAT
CTAGTGTCATGGTCTGGCCTGTGAGTGATTTGACAAATATCTGCATCCTTTATATTTGTA
CCTAAATAAAAGAACAATGAAACACCTCACATTCAACATAATAATCAAGGATCCTCCGCT
CTACCACTAAGCTAATAGCCATTCTCCTGGTAGGAATAGTTCAATGTAAGAAAAATTTGA
CCAATATACAAATATCCATTACAAAACCAAAACATTTGTTCTTACTCATCAAGATCCAAG
TAGACTTACGAGCGATATTTGTTGCATAAATTTAAGATCAAACAATTTCATCGAACCAAG
TATAATTACTATATGTGTTACAAGTTATAATGAAACATCAAGAATACTAATTTACATTGG
AAGCTCAAAAAGAAAAGTGAGAGTACCTTCGATAAATCCAAAGAGGCGCAGAGACTAAAT
TAAAAGGCAAAGAACCAGAAAAATATAATGTGTATAAGATGCCTGTTGAGGTTTGTGTAT
AGACAAGATGACTTCTTATAATGGAAAGTTACACATTTGGTCCTAGTCAAAAATACTTAT
ATTCACTA