Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g091430.3.1
CDS Infomation

Pectate lyase (AHRD V3.3 *** M1CWG5_SOLTU)
Sequence

ATGGCAATGGCTTCGAAGAAATGGCTTTCGTTTAGCTTCAGTTTTCTGCTGATTTTGTTG
CTTCTCGTCGGAGTTTACGCCGCCGGTGTGCAGCAGAGCAACGACGGTTCCGACACTAGG
ACTGTTGAAAAAGAGCAGTTGCTGAGCTCTGAAAACTCAACAATGGCGGTGAGTTTGGAA
GATGTTGAGGAGAAATTAAGCAAACATGCAGTGGATGATCCTGAAGAAGTTGTTGCCATG
GTTGCACAGAGCATTAGGAACAGCACTGAGAGGCGAAAACTAGGATATTTTTCATGTGGG
ACAGGAAATCCTATTGATGACTGCTGGAGATGTGATCCCAACTGGCAAAAGAACCGCAAG
CGTCTTGCAGATTGTGGCATTGGATTTGGGCGCAATGCTATTGGTGGTCGTGATGGTCGT
TACTATGTTGTCACTGATAATCGTGACGATGACCCTGTGAACCCCAGGCCTGGTACTATT
CGTCATGCTGTTATCCAGGAGGAACCCCTATGGATTGTGTTCAGTCGCGACATGGTCATA
CAGTTGAAACAGGAGCTCATTATGAACAGTTTCAAGACAATTGATGCACGTGGCTACAAT
GTTCACATTGCCAATGGAGCTTGTCTCACGATTCAGTTTGTTACCAATATTATTATCCAT
GGCCTACACATCCATGACTGCAAACCAACTGGAAATGCCATGGTGAGGAGTTCAACAACC
CATTTTGGCTGGAGGACAATGGCTGATGGTGATGCCATTTCTATCTTTGGCTCAAGCCAC
GTATGGGTTGATCATAACTCACTCTCTCACTGTGCTGATGGTCTTGTTGATGCTGTAATG
GGATCAACTGCCATTACTATTTCTAACAATCATTTCGCCCATCATAATGAGGTCATGCTA
TTGGGCCACAGTGACTCCTACACTAAAGACAAGCAGATGCAAGTGACAATTGCATACAAC
CACTTTGGAGAGGGTCTCATTCAAAGAATGCCTAGGTGCAGACATGGCTACTTCCATGTA
GTGAACAATGACTACACTCACTGGGAGATGTATGCTATCGGTGGAAGCGCTAACCCCACC
ATCAACAGCCAAGGAAACAGATACCTCGCCCCAGCTAATCGTTTTGCCAAGGAGGTAACG
AAAAGGGTTGACACAGCAGCAGGTCAGTGGAAGGGCTGGAACTGGAGATCATCGGGAGAC
TTGATGCTTAATGGTGCCTATTTCACTCCATCAGGTGCTGGAGCTTCAGCAAGCTACGCA
AGAGCTTCAAGCTTAGGTGCCAAGTCCTCCTCGATGGTTGGTGCCATTACTTCAAGTGCG
GGTCCCCTTGCCTGTCGTAGAAGCCGCACTTGCTAG

Peptide Sequence

PEP ID

Solyc09g091430.3.1
PEP Infomation

Pectate lyase (AHRD V3.3 *** M1CWG5_SOLTU)
Sequence

MAMASKKWLSFSFSFLLILLLLVGVYAAGVQQSNDGSDTRTVEKEQLLSSENSTMAVSLE
DVEEKLSKHAVDDPEEVVAMVAQSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRK
RLADCGIGFGRNAIGGRDGRYYVVTDNRDDDPVNPRPGTIRHAVIQEEPLWIVFSRDMVI
QLKQELIMNSFKTIDARGYNVHIANGACLTIQFVTNIIIHGLHIHDCKPTGNAMVRSSTT
HFGWRTMADGDAISIFGSSHVWVDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVML
LGHSDSYTKDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPT
INSQGNRYLAPANRFAKEVTKRVDTAAGQWKGWNWRSSGDLMLNGAYFTPSGAGASASYA
RASSLGAKSSSMVGAITSSAGPLACRRSRTC*

Transcript Sequence

Transcript ID

Solyc09g091430.3.1
Transcript Infomation

Pectate lyase (AHRD V3.3 *** M1CWG5_SOLTU)
Sequence

TCCTCTGACTCTCTCTTCCTTTTTTTTTTTGAAAGAGGAAAAATGGCAATGGCTTCGAAG
AAATGGCTTTCGTTTAGCTTCAGTTTTCTGCTGATTTTGTTGCTTCTCGTCGGAGTTTAC
GCCGCCGGTGTGCAGCAGAGCAACGACGGTTCCGACACTAGGACTGTTGAAAAAGAGCAG
TTGCTGAGCTCTGAAAACTCAACAATGGCGGTGAGTTTGGAAGATGTTGAGGAGAAATTA
AGCAAACATGCAGTGGATGATCCTGAAGAAGTTGTTGCCATGGTTGCACAGAGCATTAGG
AACAGCACTGAGAGGCGAAAACTAGGATATTTTTCATGTGGGACAGGAAATCCTATTGAT
GACTGCTGGAGATGTGATCCCAACTGGCAAAAGAACCGCAAGCGTCTTGCAGATTGTGGC
ATTGGATTTGGGCGCAATGCTATTGGTGGTCGTGATGGTCGTTACTATGTTGTCACTGAT
AATCGTGACGATGACCCTGTGAACCCCAGGCCTGGTACTATTCGTCATGCTGTTATCCAG
GAGGAACCCCTATGGATTGTGTTCAGTCGCGACATGGTCATACAGTTGAAACAGGAGCTC
ATTATGAACAGTTTCAAGACAATTGATGCACGTGGCTACAATGTTCACATTGCCAATGGA
GCTTGTCTCACGATTCAGTTTGTTACCAATATTATTATCCATGGCCTACACATCCATGAC
TGCAAACCAACTGGAAATGCCATGGTGAGGAGTTCAACAACCCATTTTGGCTGGAGGACA
ATGGCTGATGGTGATGCCATTTCTATCTTTGGCTCAAGCCACGTATGGGTTGATCATAAC
TCACTCTCTCACTGTGCTGATGGTCTTGTTGATGCTGTAATGGGATCAACTGCCATTACT
ATTTCTAACAATCATTTCGCCCATCATAATGAGGTCATGCTATTGGGCCACAGTGACTCC
TACACTAAAGACAAGCAGATGCAAGTGACAATTGCATACAACCACTTTGGAGAGGGTCTC
ATTCAAAGAATGCCTAGGTGCAGACATGGCTACTTCCATGTAGTGAACAATGACTACACT
CACTGGGAGATGTATGCTATCGGTGGAAGCGCTAACCCCACCATCAACAGCCAAGGAAAC
AGATACCTCGCCCCAGCTAATCGTTTTGCCAAGGAGGTAACGAAAAGGGTTGACACAGCA
GCAGGTCAGTGGAAGGGCTGGAACTGGAGATCATCGGGAGACTTGATGCTTAATGGTGCC
TATTTCACTCCATCAGGTGCTGGAGCTTCAGCAAGCTACGCAAGAGCTTCAAGCTTAGGT
GCCAAGTCCTCCTCGATGGTTGGTGCCATTACTTCAAGTGCGGGTCCCCTTGCCTGTCGT
AGAAGCCGCACTTGCTAGTACAGCCAGCTTCACTCTACTCTATCATTTATACAGATTTAC
CAAAAGAAAGTGTCCCTTTTTCCTTATTCCACTGTTAGATTTCCATTCTTACTACTAAAA
AACACTACCCTATAGTCCTCCCAAATCAAAGTTACATCCCATTGTTTGTCAATCAGTCCA
TTCCTCTTGGCAAGTGTACATTTTTTACACTGTCAATTCATCAGTTCCTATCTCAAAGCG
TTGTGCAACCTCGGCCTGATTTCAATTCAAGAAAAGCCAATGTCTGTTCTTGAAGCAGGT
GCAGAAGCGTTGTCCATGCCCATTTTCTTGTTTTCTTTTTTTTCTCGATCTCAAGAGTGC
TCGTCTTCCTCATCCATTAGTTTCTTCTAACCACCCACCACCCCCATTCTATCTTTGTGA
TGCTGTCTTGAGTCTTTTTAGTCTGCTATATTGTGCTTTTGGCTATTGTGTTATAGGAGT
GAATGATTTTGTTAAGTTTTTTCTTAGCTTTTTTTGAGTCATACAAGCTATATAGTGTGA
ATTGTCAAGAAAAATGTTATTGGAAGGGAAAGAAAAGAAAGAACCTTTCTGTT