Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g091240.3.1
CDS Infomation

GDT1-like protein (AHRD V3.3 *** A0A072VSW1_MEDTR)
Sequence

ATGCAGGGGTTGGCTCTTCAAACATCTAATTCTATAGCATCAAGTTATGGTGGGAAGAAA
AAGTTTTCATTTTTGAATGTTTTGGATTCATTGCCTAGCAAAAAATCAATACCCACAAGG
AGAATTTCCCCTTTTTCAGCTGGAATTTCATCTTTATTAAGATGTAGAGCGCTCCCTAAG
TTGCAGCGAAGGCATAGCAGAATTATACCCTATGCATCTAATGTTGGTGTCGGATCTGGA
AGTTTTGAAGAAAGTCAAGGAAATGAAAGCCACAATGTTTCAGTCAATCAGCCGTCTACT
GATGGTTCATCGAAAATTGAGGCACTTCCAAGTAAAATTCCTTATCCTCTCGCTATAGCT
CTTGTGCTATGTGGATGTTCGTTAGTATTTTCGGTGATTGCCTTCACGAAAGGAGGACCG
TCATCACTCATTGCAGCATTTTCGAAATCAGGGTTCACTGCTGCATTCTCATTGATATTT
GTTTCTGAGATTGGAGACAAGACATTTTTCATCGCTGCCCTCCTGGCCATGCAATATAAG
AGAATACTGGTCCTTTTGGGATCAATGGGTGCTCTTTCACTTATGACGGTCTTCTCTGTC
ATAATAGGAAGGATCTTTCATTCAGTACCTGCTCAGTTTCAAACAACCTTGCCTATTGGA
GAATACGCGGCTGTTGCCCTCTTGTTCTTTTTTGGCCTCAAATCAATTAAAGATGCATGG
GAACTTCCAAGCAATGATGTTGAGACTGGTGAAAAGAGTAGTCAGGAACTTGATGAATTT
GCAGAAGCTGAGGAGCTTGTGAAGGAAAAGGCATCAAAACGGCTCACAAATCCACTTGAA
ATTTTGTGGAAGTCTTTTAGCCTCGTATTTTTTGCTGAATGGGGAGATCGATCAATGCTT
GCAACAATAGCACTCGGTGCAGCTCAGTCTCCATGGGGCGTGGCAAGTGGTGCCATTGCC
GGACACCTGGTTGCTACATCTATTGCAATTCTAGGAGGCGGGTTTCTTGCCAATTACATT
TCTGAGAAACTGGTTGGCTACTTGGGCGGAGTTCTATTCTTAATATTTGCTGTTGCTACT
TTGTTTGGAGTCTTTTAA

Peptide Sequence

PEP ID

Solyc09g091240.3.1
PEP Infomation

GDT1-like protein (AHRD V3.3 *** A0A072VSW1_MEDTR)
Sequence

MQGLALQTSNSIASSYGGKKKFSFLNVLDSLPSKKSIPTRRISPFSAGISSLLRCRALPK
LQRRHSRIIPYASNVGVGSGSFEESQGNESHNVSVNQPSTDGSSKIEALPSKIPYPLAIA
LVLCGCSLVFSVIAFTKGGPSSLIAAFSKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYK
RILVLLGSMGALSLMTVFSVIIGRIFHSVPAQFQTTLPIGEYAAVALLFFFGLKSIKDAW
ELPSNDVETGEKSSQELDEFAEAEELVKEKASKRLTNPLEILWKSFSLVFFAEWGDRSML
ATIALGAAQSPWGVASGAIAGHLVATSIAILGGGFLANYISEKLVGYLGGVLFLIFAVAT
LFGVF*

Transcript Sequence

Transcript ID

Solyc09g091240.3.1
Transcript Infomation

GDT1-like protein (AHRD V3.3 *** A0A072VSW1_MEDTR)
Sequence

GATTTGTCCGGAGACTTAAAACTTTCAAGGAACAACATCCCTTCAGCCTAAGGTGAAGAA
AAGCCCAAATCCATAGCTTCAAAAAACGACATCGTTTTTAACTTCATCAGTTTATCTGAA
AAGATCCATGATGACACGTGGCATCTGCAAAATCCCAAGAACTCCACACTCTCTAATCAG
TTCTTCAGCTTCTTGGTTACAACTAACTTCCTGAAAAAGTGTAGAGAATCCAAATATTTT
TTATTAAATTTTTTGTTCACAAATGACTTTATAGTAAAAAAAAAGCTATCTTTTATAGTT
TTTAGTATATTGAATTAAGAAAAAAATGCAGGGGTTGGCTCTTCAAACATCTAATTCTAT
AGCATCAAGTTATGGTGGGAAGAAAAAGTTTTCATTTTTGAATGTTTTGGATTCATTGCC
TAGCAAAAAATCAATACCCACAAGGAGAATTTCCCCTTTTTCAGCTGGAATTTCATCTTT
ATTAAGATGTAGAGCGCTCCCTAAGTTGCAGCGAAGGCATAGCAGAATTATACCCTATGC
ATCTAATGTTGGTGTCGGATCTGGAAGTTTTGAAGAAAGTCAAGGAAATGAAAGCCACAA
TGTTTCAGTCAATCAGCCGTCTACTGATGGTTCATCGAAAATTGAGGCACTTCCAAGTAA
AATTCCTTATCCTCTCGCTATAGCTCTTGTGCTATGTGGATGTTCGTTAGTATTTTCGGT
GATTGCCTTCACGAAAGGAGGACCGTCATCACTCATTGCAGCATTTTCGAAATCAGGGTT
CACTGCTGCATTCTCATTGATATTTGTTTCTGAGATTGGAGACAAGACATTTTTCATCGC
TGCCCTCCTGGCCATGCAATATAAGAGAATACTGGTCCTTTTGGGATCAATGGGTGCTCT
TTCACTTATGACGGTCTTCTCTGTCATAATAGGAAGGATCTTTCATTCAGTACCTGCTCA
GTTTCAAACAACCTTGCCTATTGGAGAATACGCGGCTGTTGCCCTCTTGTTCTTTTTTGG
CCTCAAATCAATTAAAGATGCATGGGAACTTCCAAGCAATGATGTTGAGACTGGTGAAAA
GAGTAGTCAGGAACTTGATGAATTTGCAGAAGCTGAGGAGCTTGTGAAGGAAAAGGCATC
AAAACGGCTCACAAATCCACTTGAAATTTTGTGGAAGTCTTTTAGCCTCGTATTTTTTGC
TGAATGGGGAGATCGATCAATGCTTGCAACAATAGCACTCGGTGCAGCTCAGTCTCCATG
GGGCGTGGCAAGTGGTGCCATTGCCGGACACCTGGTTGCTACATCTATTGCAATTCTAGG
AGGCGGGTTTCTTGCCAATTACATTTCTGAGAAACTGGTTGGCTACTTGGGCGGAGTTCT
ATTCTTAATATTTGCTGTTGCTACTTTGTTTGGAGTCTTTTAACCAAGCTCTACAGAAAA
GAAGACAATGTCGATAAGTTCTAAGACGCCTATTTAGACTGGATAGATACGCGAGAAATG
CCAATGGTAGAGGGCAAGAAACTCCTGATGGTACCATGGATCAGTAACATGATTTGGCAT
AAAACAATGACATTCTTGTACTACTGTAGAAGAAGTAGAAGAAACTATATTAGTGGTTCT
TAGGCAACACAAGAGAGCTGTGTGTATGTGTAATACTATGGCCCCCATCAGAAAATTTTT
CTGACAGTTGATGCTTTTCCATGATTGTTGTACAAGTTTTGTATATGTGAAAGAATCAAG
ATTTCTGTTCTCTCTGTTGTAATAAGTTGATCGAGTTGTTTGAACAGGTAATCTCTTGGA
TACTCAACACTTGTGAATTCTTGTGTCATTGTGGTTCATAGAATATACT