Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g091180.3.1
CDS Infomation

Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)
Sequence

ATGTATCGTTTTGCAGCAAATCTTGCTTCTAAAGCCAGTGTTGCAAGAACCAGTTCCCAA
AAGATTGGTGGGAGGTTGAATTGGAGTAGAAACTATGCTGCAAAGGATATCAGATTTGGA
GTTGAAGCTAGAGCTTTGATGCTTCAAGGTGTTGAGCAGCTTGCTGATGCTGTTAAAGTC
ACTATGGGTCCAAAGGGGCGTAATGTGGTGATTGAACAAAGTTGGGGTGCACCCAAAGTG
ACAAAAGATGGCGTGACTGTTGCAAAAAGTATTGAATTCAAGGACAAGATACAAAATGTT
GGTGCTAGCCTTGTAAAACAAGTCGCCAATGCAACAAATGATGTTGCTGGTGATGGTACC
ACTTGTGCAACAGTTCTCACCCGAGCAATATTTGCTGAAGGATGCAAGTCAGTGGCAGCT
GGTATGAATGCAATGGACCTTAGACGGGGTATTACCATGGCTGTAGATTCTGTTGTGACA
AACCTGAAAAGCAGAGCACGGATGATCAGTACATCTGAGGAAATTGCACAGGTTGGGACT
ATCTCTGCAAACGGAGAAAGAGTAATTGGCGACCTCATTGCAAGGGCAATGGAGAAAGTA
GGCAAGGAGGGAGTCATCACTATTCAAGACGGGAAGACATTGCTCAATGAGTTGGATGTT
GTTGAAGGGATGAAGTTGGATAGAGGTTACATATCACCATACTTCATCACAAATCAGAAG
AATCAGAAATGTGAACTGGATAACCCACTAATTCTGATTCATGAGAAAAAGATCTCAAGC
ATTAATGCTGTTGTGAAAGCATTGGAGTTAGCTCTGAAGAGACAAAGGCCCCTCTTAATT
GTGGCTGAAGATGTGGACAATGAAGCACTCGCCACTCTTATTTTGAACAAACTCCGTGCT
GGAATCAAGGTTTGTGCCATCAAAGCACCAGGCTTTGGTGAAAACAGGAAAGCTTATTTG
CAAGATCTTGCTATTTTAACTGGAGGCCAAGTCATAACAGAAGAGCTTGGACTGAACATT
GAAAATTTGGAGTTCGAGATGCTGGGAACAAGTAAAGAGGCAACTATCTCTAAGGATGAT
ACTGTCATTCTTGATGGTGCTGGTGAGAAGAAGTCCATCGAGGAACGATGCGAACTGATT
AGATCAACCATTGAACAGAGCACATCTGACTATGACAAGGAGAAGTTGCAGGAAAGACTA
GCTAAGCTTTCAGGGGGTGTTGCTGTGTTAAAGATTGGAGGAGCCAGTGAAGCTGAGGTT
GGTGAAAAGAAAGATAGAGTAACTGATGCTTTGAACGCCACAAAGGCTGCAGTGGAGGAA
GGAATTGTTCCAGGTGGTGGTGTTGCTCTTCTTTATGCAGCAAGAGAATTGGATAATTTG
ACAACAGCCAACTTTGACCAGAAGATTGGTGTACAAATTATTCAGAATGCTCTGAAGACG
CCAGTACATACAATAGCCTCTAACGCAGGAGTAGAGGGTGCTGTCGTGGTTGGCAAATTG
TTGGATCAGGACAACCTTGATCTTGGATATGATGCGGCCAAGGGTGAATATGTAGATATG
ATAAAGGCAGGAATCATCGATCCAGTGAAAGTGATCAGGACAGCTTTGGTCGATGCTGCC
AGTGTCTCGTCTCTTTTGACCACAACTGAAGCAGTTGTTGTCGAGCTTCCTAAGGACGAG
AAGGAATCTCCTGCAATGGGTGGCGGTATGGGTGGTGGTATGGGTGGCATGGACTTCTGA

Peptide Sequence

PEP ID

Solyc09g091180.3.1
PEP Infomation

Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)
Sequence

MYRFAANLASKASVARTSSQKIGGRLNWSRNYAAKDIRFGVEARALMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIQNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGERVIGDLIARAMEKVGKEGVITIQDGKTLLNELDVVEGMKLDRGYISPYFITNQK
NQKCELDNPLILIHEKKISSINAVVKALELALKRQRPLLIVAEDVDNEALATLILNKLRA
GIKVCAIKAPGFGENRKAYLQDLAILTGGQVITEELGLNIENLEFEMLGTSKEATISKDD
TVILDGAGEKKSIEERCELIRSTIEQSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAARELDNLTTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLDQDNLDLGYDAAKGEYVDMIKAGIIDPVKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKESPAMGGGMGGGMGGMDF*

Transcript Sequence

Transcript ID

Solyc09g091180.3.1
Transcript Infomation

Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)
Sequence

CTCTCTTTGTACTTCAAAATCCCTTTCCACTTTCACTTTCAGCAGCATTTCTCAGCTTCA
AAATGTATCGTTTTGCAGCAAATCTTGCTTCTAAAGCCAGTGTTGCAAGAACCAGTTCCC
AAAAGATTGGTGGGAGGTTGAATTGGAGTAGAAACTATGCTGCAAAGGATATCAGATTTG
GAGTTGAAGCTAGAGCTTTGATGCTTCAAGGTGTTGAGCAGCTTGCTGATGCTGTTAAAG
TCACTATGGGTCCAAAGGGGCGTAATGTGGTGATTGAACAAAGTTGGGGTGCACCCAAAG
TGACAAAAGATGGCGTGACTGTTGCAAAAAGTATTGAATTCAAGGACAAGATACAAAATG
TTGGTGCTAGCCTTGTAAAACAAGTCGCCAATGCAACAAATGATGTTGCTGGTGATGGTA
CCACTTGTGCAACAGTTCTCACCCGAGCAATATTTGCTGAAGGATGCAAGTCAGTGGCAG
CTGGTATGAATGCAATGGACCTTAGACGGGGTATTACCATGGCTGTAGATTCTGTTGTGA
CAAACCTGAAAAGCAGAGCACGGATGATCAGTACATCTGAGGAAATTGCACAGGTTGGGA
CTATCTCTGCAAACGGAGAAAGAGTAATTGGCGACCTCATTGCAAGGGCAATGGAGAAAG
TAGGCAAGGAGGGAGTCATCACTATTCAAGACGGGAAGACATTGCTCAATGAGTTGGATG
TTGTTGAAGGGATGAAGTTGGATAGAGGTTACATATCACCATACTTCATCACAAATCAGA
AGAATCAGAAATGTGAACTGGATAACCCACTAATTCTGATTCATGAGAAAAAGATCTCAA
GCATTAATGCTGTTGTGAAAGCATTGGAGTTAGCTCTGAAGAGACAAAGGCCCCTCTTAA
TTGTGGCTGAAGATGTGGACAATGAAGCACTCGCCACTCTTATTTTGAACAAACTCCGTG
CTGGAATCAAGGTTTGTGCCATCAAAGCACCAGGCTTTGGTGAAAACAGGAAAGCTTATT
TGCAAGATCTTGCTATTTTAACTGGAGGCCAAGTCATAACAGAAGAGCTTGGACTGAACA
TTGAAAATTTGGAGTTCGAGATGCTGGGAACAAGTAAAGAGGCAACTATCTCTAAGGATG
ATACTGTCATTCTTGATGGTGCTGGTGAGAAGAAGTCCATCGAGGAACGATGCGAACTGA
TTAGATCAACCATTGAACAGAGCACATCTGACTATGACAAGGAGAAGTTGCAGGAAAGAC
TAGCTAAGCTTTCAGGGGGTGTTGCTGTGTTAAAGATTGGAGGAGCCAGTGAAGCTGAGG
TTGGTGAAAAGAAAGATAGAGTAACTGATGCTTTGAACGCCACAAAGGCTGCAGTGGAGG
AAGGAATTGTTCCAGGTGGTGGTGTTGCTCTTCTTTATGCAGCAAGAGAATTGGATAATT
TGACAACAGCCAACTTTGACCAGAAGATTGGTGTACAAATTATTCAGAATGCTCTGAAGA
CGCCAGTACATACAATAGCCTCTAACGCAGGAGTAGAGGGTGCTGTCGTGGTTGGCAAAT
TGTTGGATCAGGACAACCTTGATCTTGGATATGATGCGGCCAAGGGTGAATATGTAGATA
TGATAAAGGCAGGAATCATCGATCCAGTGAAAGTGATCAGGACAGCTTTGGTCGATGCTG
CCAGTGTCTCGTCTCTTTTGACCACAACTGAAGCAGTTGTTGTCGAGCTTCCTAAGGACG
AGAAGGAATCTCCTGCAATGGGTGGCGGTATGGGTGGTGGTATGGGTGGCATGGACTTCT
GATTGAAAAGCCAAAAACAGTAATTGCAGCTGCTTGACACATTTGGTTTATAGAACAAAG
CAAAAAAATAAATTTAGATTTATTTCCTATTTTGATGAATCTTTTTACGATAGAAAACGC
GCCTATTGTATCAATAGCAAGAGAGACAAGACCATTGTGAATTCATGTTTTTGTAGGTTC
AAAATTTGTAGTCTTCATTTGAATACGCAGCTTAAATATAGGTCCATTTCAGTGTTCCTT
TCTGGTTTTACTATTATATTGAGGTGTGATGAATTCATTTATACT