Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g091100.3.1
CDS Infomation

coenzyme F420 hydrogenase_dehydrogenase beta subunit-like
Sequence

ATGGCGTTTCTTACTGGAAAAATCTCTACTTTACCCTTCAAATTTTACACTGTTTCATCT
TCTTCACAACAACAAGATGCAAACCAAAACCTGAAATCAGTGAAAATTAGAGAAGATTGG
AGGAAAAAATCTCGACCTATTCCTCCTGGTGGGACTTATCCAGCTAAAGACCACTGCAGC
CACTGTGGTTTGTGTGACACTTACTACATTGCTCATGTGAATAATGCATGTGCTTTCTTG
GGGGATGGCATGTCTAGAGTTGAAGCTTTGGAACCTATTGTCCATGGACGAGGACGGAAA
GAAGATTCCTTGGATGAGATTTATATGGGGGTGTATGAGAATCTATTGTATGCTCGTAAA
ACTAAGCCTGTGGAAGGAGCTCAATGGACGGGGATAGTGACAACTATTGCCGTGGAGATG
CTAAAAGCTGGGATGGTGGAAGCTGTTATTTGTGTTCAGAGTGATCCAGAAGATCGATTT
GCTCCTCGACCTGTCCTGGCAAGGACTCCAGAGGAAGTTATAGCAGCTAAAGGTGTTAAG
CCGACACTGTCTCCTAATCTAAATACTCTTGCCTTAGTTGAGGCAGCTGGTGTAAAGCGC
CTTCTCTTCTGCGGGGTTGGCTGCCAAGTTCAAGCTTTAAGATCAGTGGAGCAATATTTG
AATCTGGAAAAACTTTATGTTCTAGGCACTAACTGTGTGGATAATGGACCACGAGAAGGT
TTAGATAAATTTCTGAAGGCTGCTAGCAGTGAACCTGAAACAGTTCTCCACTATGAGTTT
ATGCAAGACTACAAGGTCCATCTGAAGCATTTGGATGGCCATATTGAAGAGGTTCCCTAT
TTCTGTTTACCAGCAAATGACTTGGTTGATGTTATTGCACCATCTTGTTACAGCTGTTTT
GACTACACAAATGGCTTGGCGGATTTGGTGGTGGGATACATGGGTGTGCCGAAATACAGT
GGAATCAGCATGATGCAGCATCCCCAGTATGTTACTGTCAGAAATGAACGTGGTAGAGAA
ATGCTAAACCTTATCGAGAACCTCTTGGAAATTACTCCGACGATAAGTAGTGGTAAGCGG
CGTCCATTTGTCGTGGAAACCGTGAAGGCAGATGATGAAGCAAAATTTGGAAGAGGTCCT
TCTCAACCTGCTCCAAAGTTTGTTGGAAATTTAATAGCATTTCTTCTCAACATAGTCGGA
CCGAAGGGTCTAGAATTTGCACGTTACTCGCTAGATTATCACACAATCAGAAATTACTTA
AACGTAGTCCGCAAATGGGGAAAAGAAAGAGCGGACAGACATATGCCTGAATATGCAAAG
AAAATTGTTAGCATGTACAACGAGAGTGGAGAAATTGATCAAATGCTTTCCAAAAAGTGA

Peptide Sequence

PEP ID

Solyc09g091100.3.1
PEP Infomation

coenzyme F420 hydrogenase_dehydrogenase beta subunit-like
Sequence

MAFLTGKISTLPFKFYTVSSSSQQQDANQNLKSVKIREDWRKKSRPIPPGGTYPAKDHCS
HCGLCDTYYIAHVNNACAFLGDGMSRVEALEPIVHGRGRKEDSLDEIYMGVYENLLYARK
TKPVEGAQWTGIVTTIAVEMLKAGMVEAVICVQSDPEDRFAPRPVLARTPEEVIAAKGVK
PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQYLNLEKLYVLGTNCVDNGPREG
LDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCF
DYTNGLADLVVGYMGVPKYSGISMMQHPQYVTVRNERGREMLNLIENLLEITPTISSGKR
RPFVVETVKADDEAKFGRGPSQPAPKFVGNLIAFLLNIVGPKGLEFARYSLDYHTIRNYL
NVVRKWGKERADRHMPEYAKKIVSMYNESGEIDQMLSKK*

Transcript Sequence

Transcript ID

Solyc09g091100.3.1
Transcript Infomation

coenzyme F420 hydrogenase_dehydrogenase beta subunit-like
Sequence

TGTCGAGCTTAGTAACGTGGGCTTGTAACCCAAGTGGGGATGTTAAGGTGGTGGAATATT
GGGCTGTCCCAGATGGCTGGGCTTGGTGGGCTAATTTCTGGCCTGCCCTATCCAAGCACA
GAGTTGGATCATGTGGTCCAATTGAAAGAATGGGCTACTAGATTCCTAAAGTGGGGTGGA
CCGCGTGAGGCTGGTTTCACAGAGCAACGAAAAACTTCCGCTTTGTGCAGTGGAAGGATA
ACGGACCGGTGCCTTCCAAGTTCCATTAATGCCTGATGGGCTGCTCCAATTAAACCACCA
CTTTTTTTCCGATATAGTGACTCATGAACTTCTCAATTTTGCTGGTTTTGTAAACGGGAC
TTATGATTTATATCGTTATCGGTGCCTTCCAAGTTCCATTAATGCCTGATGGGCTGCTCC
AATTAAACCACCACTTTTTTTCCGATATAGTGACTCATGAACTTCTCAATTTTGCTGGTT
TTGTAAACGGGACTTATGATTTATAAGATATAGCGAGTAATGAACTTCTCTAGGTTTAAT
CTTCCAAGTTTTGAAAATGGAACTTATACTCCCATCGACATGTTATGTAGGACTTACGTC
TATACCTTATAAGATATAATTTGTGACTTTATGAACTTTTTAAGGTATAATGTTTTGAAA
TTGAACTTATGTCTACAGAGGCATAAGTTTTGTATGACATAACATATGCCTTACGATTGT
ATTTTCAAAGACTATTGATCCGACGAACAAAAATTAAAAGCCACCCTATTTTGAGTATTC
ATATGAACGACTATATGATTTTACTTCAGTGAAATGATATGGTATGTGTTGTTTATCTCA
TCAAAATTTCAACACAATATGTTATCGAGTACTTATTCAGGAGCAAAGCTAGGTAGGACC
AAAAGGATTCGTTCGAATCACTTTCAGCGATTCATTGTTTATAAATAATTAAAATTATTT
CTTAATTTTCTAAATATTTAATATTTCACTTTTTTTACTCATCCAAAAAAATAAAAAGTA
GAAATTAATTAAATACCGGACGACACCGTTTTGGTTCCACCCTTAAAAGAATCTCATTTG
ATATATATTTGTGGCGCAAAACACTTGTGCAGATACACAGAGCAACAATGGCGTTTCTTA
CTGGAAAAATCTCTACTTTACCCTTCAAATTTTACACTGTTTCATCTTCTTCACAACAAC
AAGATGCAAACCAAAACCTGAAATCAGTGAAAATTAGAGAAGATTGGAGGAAAAAATCTC
GACCTATTCCTCCTGGTGGGACTTATCCAGCTAAAGACCACTGCAGCCACTGTGGTTTGT
GTGACACTTACTACATTGCTCATGTGAATAATGCATGTGCTTTCTTGGGGGATGGCATGT
CTAGAGTTGAAGCTTTGGAACCTATTGTCCATGGACGAGGACGGAAAGAAGATTCCTTGG
ATGAGATTTATATGGGGGTGTATGAGAATCTATTGTATGCTCGTAAAACTAAGCCTGTGG
AAGGAGCTCAATGGACGGGGATAGTGACAACTATTGCCGTGGAGATGCTAAAAGCTGGGA
TGGTGGAAGCTGTTATTTGTGTTCAGAGTGATCCAGAAGATCGATTTGCTCCTCGACCTG
TCCTGGCAAGGACTCCAGAGGAAGTTATAGCAGCTAAAGGTGTTAAGCCGACACTGTCTC
CTAATCTAAATACTCTTGCCTTAGTTGAGGCAGCTGGTGTAAAGCGCCTTCTCTTCTGCG
GGGTTGGCTGCCAAGTTCAAGCTTTAAGATCAGTGGAGCAATATTTGAATCTGGAAAAAC
TTTATGTTCTAGGCACTAACTGTGTGGATAATGGACCACGAGAAGGTTTAGATAAATTTC
TGAAGGCTGCTAGCAGTGAACCTGAAACAGTTCTCCACTATGAGTTTATGCAAGACTACA
AGGTCCATCTGAAGCATTTGGATGGCCATATTGAAGAGGTTCCCTATTTCTGTTTACCAG
CAAATGACTTGGTTGATGTTATTGCACCATCTTGTTACAGCTGTTTTGACTACACAAATG
GCTTGGCGGATTTGGTGGTGGGATACATGGGTGTGCCGAAATACAGTGGAATCAGCATGA
TGCAGCATCCCCAGTATGTTACTGTCAGAAATGAACGTGGTAGAGAAATGCTAAACCTTA
TCGAGAACCTCTTGGAAATTACTCCGACGATAAGTAGTGGTAAGCGGCGTCCATTTGTCG
TGGAAACCGTGAAGGCAGATGATGAAGCAAAATTTGGAAGAGGTCCTTCTCAACCTGCTC
CAAAGTTTGTTGGAAATTTAATAGCATTTCTTCTCAACATAGTCGGACCGAAGGGTCTAG
AATTTGCACGTTACTCGCTAGATTATCACACAATCAGAAATTACTTAAACGTAGTCCGCA
AATGGGGAAAAGAAAGAGCGGACAGACATATGCCTGAATATGCAAAGAAAATTGTTAGCA
TGTACAACGAGAGTGGAGAAATTGATCAAATGCTTTCCAAAAAGTGAATAATTTGATGGT
AGAACTTTGGCATTTGCAACTCA