Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g091030.3.1
CDS Infomation

Beta-amylase 1
Sequence

ATGAGTCTGCCACACCAGATCGGTGCCTTATCAGGAACATCGCTCACGGCGGAAACCGGT
GGAGTTTCATGCGAAGTTCCGGCGAAGGGGAGTTCAGCTACATCAGCTATGTGGAGAACA
CCGATGACGAATTTAAAAGTATCGGTGCAAAAAACAGGAAATGAAATTGACAGGGTGTCG
CCGTCGCCGTCGCCGCCGATGAGTCCGATGATGGGAGGAGGAATGCGACCGGATTTATCG
GTAGCGTGTCAAGCGTTGATGGAGGCTCAGGTAGAGGAGGTAGTTGAGAGAGAATATAAG
GTTAGGAATTCGTCGGAGAAAGAGAAAGGTGTTCCGGTGTTTGTTATGATGCCGTTGGAT
AGTGTGAAAACGGATCATACTGTGAATAGAAAAAAGGCGATGAATGCGAGTTTACAGGCG
TTGAAAAGCGCCGGTGTGGAAGGGATTATGATGGATGTGTGGTGGGGATTGGTGGAGAGA
GATGCACCGGGAGAGTATAATTGGGGCGGTTATGCTGAGCTTATGGAAATGGCGAAAAAA
CATGGACTCAAAGTTCAAGCTGTGATGTCTTTCCATCAATGCGGTGGTAACGTCGGTGAT
TCCTGCACGATCCCTCTTCCGAGGTGGGTTGTTGAGGAGATGGAGAAGGATCCAGATCTT
GCATACACAGATCAGTGGGGAAGGAGGAATTTTGAATATGTATCGCTTGGTTGCGATACA
CTTCCAGTTCTTAAAGGAAGGACTCCTGTTCAATGCTATTCTGATTTCATGAGAGGGTTT
AGAGATAGATTTGAGAATCTCTTAGGTGATACCATTGTGGAAATTCAAGTCGGGATGGGT
CCAGCTGGTGAGCTCCGTTATCCATCCTATCCCGAAAAAGATGGAATATGGAAGTTCCCT
GGAATCGGTGCTTTTCAGTGTTATGATAAGTACATGATCGGTAGCTTACAGGGTGCAGCG
GAAGCATTTGGTAAGCCTGAATGGGGACACACCGGTCCAACCGATGCTGGTGAGTACAAC
AATTGGCCAGAAGATACAAACTTTTTCAAGAAGGAAGGTGGTGGATGGGATAGTCAATAC
GGGGAGTTCTTCCTCACTTGGTATTCTCAAATGCTTTTGAACCATGGCGAGAGGATACTG
CAATCATCCAAGGCGATATTCGAGGACAAAGGTGTGAAGATTTCAGTTAAGATTGCAGGT
ATCCACTGGCACTATGGAACAAGGTCCCATGCCCCTGAGTTGACTGCTGGATACTACAAC
ACTCGTAACCGAGATGGTTACCTTCCCATCGCCCAAATGCTTGCCCGCCACGGTGCAGTT
TTCAACTTCACATGTGTTGAAATGCGTGACCACGAGCAGCCACAAGATGCACAATGTGCA
CCTGAGAAGTTGGTTAGGCAGGTGGCGTTAGCAACTCAGGAAGCTCAAGTTCCACTTGCT
GGGGAGAATGCATTGCCACGATACGATGATTATGCTCATGAACAGATCCTTCAAGCGTCC
TCGTTGAGCATCAACGATCAATCAGGTGATAGAGAGATGAGCGCGTTTACATACTTGAGG
ATGAATCCTGACTTATTCCATCCTGATAACTGGAGACGATTCGTTGCCTTTGTGAAGAAA
ATGAAAGAAGGAAAAGACGCTAACAAATGCCGCGAACAGGTAGAGAGGGAAGCAGAGCAT
TTCGTTCATATAACTCAGCCGTTAGTACAAGAAGCTGCAGTAGCCCTAATGCACTAA

Peptide Sequence

PEP ID

Solyc09g091030.3.1
PEP Infomation

Beta-amylase 1
Sequence

MSLPHQIGALSGTSLTAETGGVSCEVPAKGSSATSAMWRTPMTNLKVSVQKTGNEIDRVS
PSPSPPMSPMMGGGMRPDLSVACQALMEAQVEEVVEREYKVRNSSEKEKGVPVFVMMPLD
SVKTDHTVNRKKAMNASLQALKSAGVEGIMMDVWWGLVERDAPGEYNWGGYAELMEMAKK
HGLKVQAVMSFHQCGGNVGDSCTIPLPRWVVEEMEKDPDLAYTDQWGRRNFEYVSLGCDT
LPVLKGRTPVQCYSDFMRGFRDRFENLLGDTIVEIQVGMGPAGELRYPSYPEKDGIWKFP
GIGAFQCYDKYMIGSLQGAAEAFGKPEWGHTGPTDAGEYNNWPEDTNFFKKEGGGWDSQY
GEFFLTWYSQMLLNHGERILQSSKAIFEDKGVKISVKIAGIHWHYGTRSHAPELTAGYYN
TRNRDGYLPIAQMLARHGAVFNFTCVEMRDHEQPQDAQCAPEKLVRQVALATQEAQVPLA
GENALPRYDDYAHEQILQASSLSINDQSGDREMSAFTYLRMNPDLFHPDNWRRFVAFVKK
MKEGKDANKCREQVEREAEHFVHITQPLVQEAAVALMH*

Transcript Sequence

Transcript ID

Solyc09g091030.3.1
Transcript Infomation

Beta-amylase 1
Sequence

GGCAATGAGTCTGCCACACCAGATCGGTGCCTTATCAGGAACATCGCTCACGGCGGAAAC
CGGTGGAGTTTCATGCGAAGTTCCGGCGAAGGGGAGTTCAGCTACATCAGCTATGTGGAG
AACACCGATGACGAATTTAAAAGTATCGGTGCAAAAAACAGGAAATGAAATTGACAGGGT
GTCGCCGTCGCCGTCGCCGCCGATGAGTCCGATGATGGGAGGAGGAATGCGACCGGATTT
ATCGGTAGCGTGTCAAGCGTTGATGGAGGCTCAGGTAGAGGAGGTAGTTGAGAGAGAATA
TAAGGTTAGGAATTCGTCGGAGAAAGAGAAAGGTGTTCCGGTGTTTGTTATGATGCCGTT
GGATAGTGTGAAAACGGATCATACTGTGAATAGAAAAAAGGCGATGAATGCGAGTTTACA
GGCGTTGAAAAGCGCCGGTGTGGAAGGGATTATGATGGATGTGTGGTGGGGATTGGTGGA
GAGAGATGCACCGGGAGAGTATAATTGGGGCGGTTATGCTGAGCTTATGGAAATGGCGAA
AAAACATGGACTCAAAGTTCAAGCTGTGATGTCTTTCCATCAATGCGGTGGTAACGTCGG
TGATTCCTGCACGATCCCTCTTCCGAGGTGGGTTGTTGAGGAGATGGAGAAGGATCCAGA
TCTTGCATACACAGATCAGTGGGGAAGGAGGAATTTTGAATATGTATCGCTTGGTTGCGA
TACACTTCCAGTTCTTAAAGGAAGGACTCCTGTTCAATGCTATTCTGATTTCATGAGAGG
GTTTAGAGATAGATTTGAGAATCTCTTAGGTGATACCATTGTGGAAATTCAAGTCGGGAT
GGGTCCAGCTGGTGAGCTCCGTTATCCATCCTATCCCGAAAAAGATGGAATATGGAAGTT
CCCTGGAATCGGTGCTTTTCAGTGTTATGATAAGTACATGATCGGTAGCTTACAGGGTGC
AGCGGAAGCATTTGGTAAGCCTGAATGGGGACACACCGGTCCAACCGATGCTGGTGAGTA
CAACAATTGGCCAGAAGATACAAACTTTTTCAAGAAGGAAGGTGGTGGATGGGATAGTCA
ATACGGGGAGTTCTTCCTCACTTGGTATTCTCAAATGCTTTTGAACCATGGCGAGAGGAT
ACTGCAATCATCCAAGGCGATATTCGAGGACAAAGGTGTGAAGATTTCAGTTAAGATTGC
AGGTATCCACTGGCACTATGGAACAAGGTCCCATGCCCCTGAGTTGACTGCTGGATACTA
CAACACTCGTAACCGAGATGGTTACCTTCCCATCGCCCAAATGCTTGCCCGCCACGGTGC
AGTTTTCAACTTCACATGTGTTGAAATGCGTGACCACGAGCAGCCACAAGATGCACAATG
TGCACCTGAGAAGTTGGTTAGGCAGGTGGCGTTAGCAACTCAGGAAGCTCAAGTTCCACT
TGCTGGGGAGAATGCATTGCCACGATACGATGATTATGCTCATGAACAGATCCTTCAAGC
GTCCTCGTTGAGCATCAACGATCAATCAGGTGATAGAGAGATGAGCGCGTTTACATACTT
GAGGATGAATCCTGACTTATTCCATCCTGATAACTGGAGACGATTCGTTGCCTTTGTGAA
GAAAATGAAAGAAGGAAAAGACGCTAACAAATGCCGCGAACAGGTAGAGAGGGAAGCAGA
GCATTTCGTTCATATAACTCAGCCGTTAGTACAAGAAGCTGCAGTAGCCCTAATGCACTA
AGCAAATCGTTGTCAAATAGTACTGTTTTAATTTGATCCTTTTAGCTAACATGAAGTTTT
TCAACATGTTACCTGGATCTTATAGCTCGTTATCGTTGTTCTTAAATGTTTGTAAAACTG
TTCATCGTGTAGTTTTTTTAAAGCTAGACATTATGTCTTAATGAAATGATACATAATTCA
GTAGTAAATACACCTCTTCAATCC