Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g090180.1.1
CDS Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	ATGGAACACAACCAAGAAGTGGATTCACCAAACTCAGTCATCATCAACCACCATCATCAT CACAATCACAACCTTGATAACAATTCGATGACGATGTTAGCGGGTAACAATAATAATAAT AATAATAATAGTTATCTTGCTTCATCGTCATCGAATTCGCCAACAACCCTAAGCCGATAC GAGAACCAAAAACGTCGTGATTGGAACACGTTTGGTCAATACCTAAGAAACCATAGACCA CCACTCTCTCTCACTCGTTGTAGTGGGGCACACGTGCTAGAATTTCTTCGATACCTTGAC CAATTTGGAAAGACTAAGGTTCACACTCAACTATGTCCATTTTTCGGGCACCCAAACCCA CCCGCACCTTGTCCGTGCCCGTTAAGACAAGCCTGGGGGAGCCTTGATGCACTCATAGGA CGGCTTCGAGCCGCTTATGAGGAAAACGGTGGAAAACCCGAAACTAACCCTTTTGGTGCA AGGGCAGTTAGGCTTTACCTTCGCGAAGTTCGCGATTCTCAAGCTAAAGCTAGAGGAATA AGTTATGAAAAAAAGAAACGCAAAAAACCAAATCCTCAACATTCATCATCGTCATCATTG CCACCACCAAATGGAAATTCAAGCTAA

Peptide Sequence

PEP ID	Solyc09g090180.1.1
PEP Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	MEHNQEVDSPNSVIINHHHHHNHNLDNNSMTMLAGNNNNNNNNSYLASSSSNSPTTLSRY ENQKRRDWNTFGQYLRNHRPPLSLTRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNP PAPCPCPLRQAWGSLDALIGRLRAAYEENGGKPETNPFGARAVRLYLREVRDSQAKARGI SYEKKKRKKPNPQHSSSSSLPPPNGNSS*

Transcript Sequence

Transcript ID	Solyc09g090180.1.1
Transcript Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	ATGGAACACAACCAAGAAGTGGATTCACCAAACTCAGTCATCATCAACCACCATCATCAT CACAATCACAACCTTGATAACAATTCGATGACGATGTTAGCGGGTAACAATAATAATAAT AATAATAATAGTTATCTTGCTTCATCGTCATCGAATTCGCCAACAACCCTAAGCCGATAC GAGAACCAAAAACGTCGTGATTGGAACACGTTTGGTCAATACCTAAGAAACCATAGACCA CCACTCTCTCTCACTCGTTGTAGTGGGGCACACGTGCTAGAATTTCTTCGATACCTTGAC CAATTTGGAAAGACTAAGGTTCACACTCAACTATGTCCATTTTTCGGGCACCCAAACCCA CCCGCACCTTGTCCGTGCCCGTTAAGACAAGCCTGGGGGAGCCTTGATGCACTCATAGGA CGGCTTCGAGCCGCTTATGAGGAAAACGGTGGAAAACCCGAAACTAACCCTTTTGGTGCA AGGGCAGTTAGGCTTTACCTTCGCGAAGTTCGCGATTCTCAAGCTAAAGCTAGAGGAATA AGTTATGAAAAAAAGAAACGCAAAAAACCAAATCCTCAACATTCATCATCGTCATCATTG CCACCACCAAATGGAAATTCAAGCTAA