Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g090100.3.1
CDS Infomation	cryptochrome 2
Sequence	ATGGAGAGCAATTACAAGACAATTGTGTGGTTTAGGAGGGATTTGAGGATTGAGGATAAT CCAGCTTTAGCTGCTGCTGCTAGAAATGGAAGTGTTTTACCGGTGTTTATTTGGTGTCCG AAGGAAGAAGGGCAATTTTATCCCGGTAGAGTTTCAAGATGGTGGCTGAAGCAATCTCTG ATTCACTTGAAACAGTCTTTGAAATCTCTTGGGGCTGAACTTGTGTTGATGAAAGCTCAG AGTACACTTTCTGCTCTCACGGAGTGTGTCGATGCTGTTGGAGCAACAAAAGTTGTGTAT AATCATCTATATGATCCTGTTTCACTTGTTCGTGACCACAATATCAAGCAAAAGTTGGGG GATCTTGGCATATCTGTTCAGAGCTACAACGGGGACTTACTGAATGAACCATGGGAAGTT TACGATGATGATGGCAAAGTTTTTACAACTTTTGATGCATACTGGGAGAAGTCATTAAGT ATACAGAACGAACCTGTTTCACAACTTCCTCCTTGGAGATTAACTCAAGCTGCAGGATCA GTTAAAATGTGTTCAGTTGAGGAGTTGGGACTGGAAAACGAGTCAGAAAAATCTAGTAAT GCATTACTAGGGAAAGGATGGGCACCAGGTTGGAGCAATGCAGACAAGGCCTTAACCGAA TTTGTAGAGAGCAATCTACTCGCGTACTCAAAGGATAGGTTGAGAGTCGGGGGAAATTCT ACATCCCTTTTGTCTCCTTATCTCCACTTTGGAGAAGTAAGTGTGAGGAAAGTTTTCAAT AGTGTACGCTTGAAGCAGATACTTTGGACCAAAGAAGGGAACTCTGTTGGAAAAGACAGT GCTACTATTTACCTTAGAGCTATTGGACTGCGAGAGTATTCTCGTTATATCTGTTTTAAT TTCCCATTTACTCATGAAAGGTCGTTACTGAACAACCTGAGGTTTTTCCCTTGGAATGCT GATCAAGCCCATTTTAAGGCTTGGCGACAGGGACGGACTGGTTATCCATTAGTCGATGCA GGAATGAGGGAGCTTTGGGCAACGGGATGGGTTCATAATAAAATAAGAGTGATTGTGTCA AGTTTCTTTGTCAAGTTTTTACTTCTGCCATGGCAATGGGGGATGAAATACTTCTGGGAC ACACTCTTGGACGCGGATTTAGAAAGTGACATAATTGGTTGGCAATACATCTCTGGTAGC TTGCCCGATGGTCATGAACTTGAGCGCCTCGATAACCCAGAGGTTCAAGGATTCAATTAT GATCCGGAGGGCGAATATGTGAGACATTGGCTACCTGAGCTAGCAAGAATGCCGGCTGAG TGGATCCATCATCCTTGGGATGCACCACTTAATGTGCTCAAAGCTGCAGGGGTGGAACTC GGAATGAATTATCCGAACCCCATAATTGATGTAGATGTTGCGAGGGATCGTTTAATGCAA GCTATAATTATCATGAGAGAAAAAGAAGCAGCTGTGAATACTTCACATGCAAATGGAACT GTTGAAGTTGTGTTTGATAACTCGGAAAATGTTGGAGATTCAGCCAGTATTCCAAAGGAC GACGTTGTAAAGGGAAAGGAGCCTTGCCCGAGCAGTTCATCTTATGATCAAAGGGTGCCA TCAATGCAAAATGTAGGCACTTATAGAAAGAGACCAAAGCCCGAAGAGGAAACAAAGAAG CTCAATGATAACAAGCTTAGCTACAAGAACGAAAGGATCAAAATGTCAAACGTGGACGGT GACTTGTGCTCTACTGCAGAATCCTCTTCTATGAAAAAACAGATGACCGTCAGCAGAAAC TCATTCTCTGTACCTCGAACAATTACCATGTCTCACGACAGAAAATCCTTTGATGACGAA GCATCATCACATGTGAAGCTACAAAAGGAAGAAGAGATTGACACATAA

Peptide Sequence

PEP ID	Solyc09g090100.3.1
PEP Infomation	cryptochrome 2
Sequence	MESNYKTIVWFRRDLRIEDNPALAAAARNGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSL IHLKQSLKSLGAELVLMKAQSTLSALTECVDAVGATKVVYNHLYDPVSLVRDHNIKQKLG DLGISVQSYNGDLLNEPWEVYDDDGKVFTTFDAYWEKSLSIQNEPVSQLPPWRLTQAAGS VKMCSVEELGLENESEKSSNALLGKGWAPGWSNADKALTEFVESNLLAYSKDRLRVGGNS TSLLSPYLHFGEVSVRKVFNSVRLKQILWTKEGNSVGKDSATIYLRAIGLREYSRYICFN FPFTHERSLLNNLRFFPWNADQAHFKAWRQGRTGYPLVDAGMRELWATGWVHNKIRVIVS SFFVKFLLLPWQWGMKYFWDTLLDADLESDIIGWQYISGSLPDGHELERLDNPEVQGFNY DPEGEYVRHWLPELARMPAEWIHHPWDAPLNVLKAAGVELGMNYPNPIIDVDVARDRLMQ AIIIMREKEAAVNTSHANGTVEVVFDNSENVGDSASIPKDDVVKGKEPCPSSSSYDQRVP SMQNVGTYRKRPKPEEETKKLNDNKLSYKNERIKMSNVDGDLCSTAESSSMKKQMTVSRN SFSVPRTITMSHDRKSFDDEASSHVKLQKEEEIDT*

Transcript Sequence

Transcript ID	Solyc09g090100.3.1
Transcript Infomation	cryptochrome 2
Sequence	GGTCTTGTGGTGGTCCTGCAGATTACATTTTTTAGGATTATTATTCTTCTAAAGAGCTGC TGCCTTTGGACTCTTGTCTTTGAGGCCATTCCACTTGATCACATGAAGTCTAATCTTTTA CTACTTACTATCTTTTTCCCTTTTTTGCATCTCACAAGATTTTAATACTCCATGTGGGAT GTTCCCTAATGTTGTTCTTGGATTTTGTCTTATCTGATCTATACTATCTTGGTTAAACAC AATCTTGATACTAAATTTCAGTAGTAAATCTCTTATTGGTTCTCTTATGACATTTTCTGG TGGAATTATTGGTATGGGTGAGATTGATCTTTGATTTCTTGAGTATTAGTGGTGGTTTTC TTTACTTGGGGTTTTAAAAAAGTATGATTTTTCACTAAGTTTGATGGTTTTCTTGGGAAT ATGATGAGAAATTGGAGTGAGTTTTGAGTAAAGATTGGATTTTTATGATGTTATGAGATT TGGAGTGAAGATATTTGTTGGGGTTTGAAAATTTTTTGTGAAATTGATCTTGGTTTTTGG CAAAATATGATTTTTAACTAAGTATGCTAGTTTTCTTGGGGATATGATGAAAAGTTGGAC TGAATTTTGAGTAAAGATTGGATTTTTATGATGTTTTGAGCTTTGGGGTGAGCTGAAGTG AAGTTGTTTCTTGGGGATTGTTTGGATTTGTCCAACTTTGTGAGAATCTTGGTTTCTTGA GTATTAGTATTGGTTGGTTTTAGTTGGGGTTTGATAAGATAGGATTTTAAACTTAAGTAT GCTAGTTTTTTTGGGAATATGATGAGAATTTGGACTAAGTTTTGAGCAAAGATTGAATTT TTATCATATTTTGAGATTTGGAGTGAAGAGTTGAAGTGAAGTATTTGTTGGGGGTTGTTT GGTTTTGTCCATTTTGTGGGATCTGTGGAAACTGACTAGTTGGAAATGGAGAGCAATTAC AAGACAATTGTGTGGTTTAGGAGGGATTTGAGGATTGAGGATAATCCAGCTTTAGCTGCT GCTGCTAGAAATGGAAGTGTTTTACCGGTGTTTATTTGGTGTCCGAAGGAAGAAGGGCAA TTTTATCCCGGTAGAGTTTCAAGATGGTGGCTGAAGCAATCTCTGATTCACTTGAAACAG TCTTTGAAATCTCTTGGGGCTGAACTTGTGTTGATGAAAGCTCAGAGTACACTTTCTGCT CTCACGGAGTGTGTCGATGCTGTTGGAGCAACAAAAGTTGTGTATAATCATCTATATGAT CCTGTTTCACTTGTTCGTGACCACAATATCAAGCAAAAGTTGGGGGATCTTGGCATATCT GTTCAGAGCTACAACGGGGACTTACTGAATGAACCATGGGAAGTTTACGATGATGATGGC AAAGTTTTTACAACTTTTGATGCATACTGGGAGAAGTCATTAAGTATACAGAACGAACCT GTTTCACAACTTCCTCCTTGGAGATTAACTCAAGCTGCAGGATCAGTTAAAATGTGTTCA GTTGAGGAGTTGGGACTGGAAAACGAGTCAGAAAAATCTAGTAATGCATTACTAGGGAAA GGATGGGCACCAGGTTGGAGCAATGCAGACAAGGCCTTAACCGAATTTGTAGAGAGCAAT CTACTCGCGTACTCAAAGGATAGGTTGAGAGTCGGGGGAAATTCTACATCCCTTTTGTCT CCTTATCTCCACTTTGGAGAAGTAAGTGTGAGGAAAGTTTTCAATAGTGTACGCTTGAAG CAGATACTTTGGACCAAAGAAGGGAACTCTGTTGGAAAAGACAGTGCTACTATTTACCTT AGAGCTATTGGACTGCGAGAGTATTCTCGTTATATCTGTTTTAATTTCCCATTTACTCAT GAAAGGTCGTTACTGAACAACCTGAGGTTTTTCCCTTGGAATGCTGATCAAGCCCATTTT AAGGCTTGGCGACAGGGACGGACTGGTTATCCATTAGTCGATGCAGGAATGAGGGAGCTT TGGGCAACGGGATGGGTTCATAATAAAATAAGAGTGATTGTGTCAAGTTTCTTTGTCAAG TTTTTACTTCTGCCATGGCAATGGGGGATGAAATACTTCTGGGACACACTCTTGGACGCG GATTTAGAAAGTGACATAATTGGTTGGCAATACATCTCTGGTAGCTTGCCCGATGGTCAT GAACTTGAGCGCCTCGATAACCCAGAGGTTCAAGGATTCAATTATGATCCGGAGGGCGAA TATGTGAGACATTGGCTACCTGAGCTAGCAAGAATGCCGGCTGAGTGGATCCATCATCCT TGGGATGCACCACTTAATGTGCTCAAAGCTGCAGGGGTGGAACTCGGAATGAATTATCCG AACCCCATAATTGATGTAGATGTTGCGAGGGATCGTTTAATGCAAGCTATAATTATCATG AGAGAAAAAGAAGCAGCTGTGAATACTTCACATGCAAATGGAACTGTTGAAGTTGTGTTT GATAACTCGGAAAATGTTGGAGATTCAGCCAGTATTCCAAAGGACGACGTTGTAAAGGGA AAGGAGCCTTGCCCGAGCAGTTCATCTTATGATCAAAGGGTGCCATCAATGCAAAATGTA GGCACTTATAGAAAGAGACCAAAGCCCGAAGAGGAAACAAAGAAGCTCAATGATAACAAG CTTAGCTACAAGAACGAAAGGATCAAAATGTCAAACGTGGACGGTGACTTGTGCTCTACT GCAGAATCCTCTTCTATGAAAAAACAGATGACCGTCAGCAGAAACTCATTCTCTGTACCT CGAACAATTACCATGTCTCACGACAGAAAATCCTTTGATGACGAAGCATCATCACATGTG AAGCTACAAAAGGAAGAAGAGATTGACACATAAATCAACTCGTGCAAAAATGAAGCTACA ACGCGATGATTCCCTCACCATCTCCAAACATCTGATAGTTGAATCAACATATGCAGTGGA ATGACGATATCCTGTTGAACATTTCTTCGTGTATATATAACTTTTTCTTAATCGTAGCAA GGTTTGTAGTTTGTTTAACATAGTACGCGATAGAACTCATCGTGAAGCAGCTCAGATTCA TGGTTTAATCTCTGCTTTGTTTAGTTACATATATAGACCATGCATATGTAATCTTGAATA TGATTTGCTTTTTCTTGTATTTTCATAGTAATAAAAGATGAAAATAGGTCATCTAGTTTT GAGAAAATGATAACATATCCTACATTTTGGGTATAAATCG