Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g089890.1.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	ATGGATCTTGTTAGACTAAAGTATTTTGAATCTTTTTCACATATGAAAAATCATACAATT AGTCCTCCAATTTTTGGTTCACCTATACATTCTTCATCAAATCATGCTGGATTTCCAATT ATAGCAGTTGCTATTATTGGAATATTAGCAACTTGTGTTTTACTAGTTAGCTACTACATT TTTGTGATAAAATGTTGTTTGAATTGGCACAGAATTGATCTCTTGAGACGATTTTCGATC TCAAGAAATCGCCGTGTTGAAGACCCTTTAATGATTTACTCACCAGCAGTAGAGAATAGG GGATTAGACGAATCAGTGATTCGTTCAATCCCCGTATTTAAGTACAAGAAAAGGGAAGAA AATTCAAGAATTCATAGTGAATGTGTTGTTTGTTTAAATGAATTTCAAGAAAATGAAAAG CTAAGAGTCATACCAAATTGTGCACATATTTTTCATATTGATTGTATTGATGTTTGGTTA CAAAACAATGCAAATTGTCCACTTTGTAGAAATAGTATTTCATCATGTACAACAATTAGT AACACAAAGTTATTGTTGGATCCAATCATTGCTCCAAGTTCAACACCTTATCAAGATCCA AATCTTGAAAATTTTAGAGATGATGATTATGTTGTGATTGAAATATCAAACAATAATCAA GAAAGGTTGATGATGAATAATAATACAGGGGAAACAACAGGGCATTTTTCGCCACGAAAA AAAGAACAACAAAAGGTTTCATCAAGAAAATGTAACAAGTTTAGACATGTAACAAGTATG GGAGATGAGTGTATAAATATGAGGAAGAAAGATGATGAGTTTGATTCAATTCAGCCTATA AGAAGATCATTTTCAATGGATTCAGCGACGGATCGACAACTTTACGTAGCTGTTCAAGAG ATTATAATGCAGCAACAAAGGCAAGTGAGTGATGTTAGTCCCTTTGAAAGTAGTAGTAGT AGTAGTAGTAGAGTAAAAAGATCATTTTTTTCATTTGGACATGGAAGGGGATTAAGAAAT GTAGTTTTACCTATTCAGTTAGAGTCATAA

Peptide Sequence

PEP ID	Solyc09g089890.1.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	MDLVRLKYFESFSHMKNHTISPPIFGSPIHSSSNHAGFPIIAVAIIGILATCVLLVSYYI FVIKCCLNWHRIDLLRRFSISRNRRVEDPLMIYSPAVENRGLDESVIRSIPVFKYKKREE NSRIHSECVVCLNEFQENEKLRVIPNCAHIFHIDCIDVWLQNNANCPLCRNSISSCTTIS NTKLLLDPIIAPSSTPYQDPNLENFRDDDYVVIEISNNNQERLMMNNNTGETTGHFSPRK KEQQKVSSRKCNKFRHVTSMGDECINMRKKDDEFDSIQPIRRSFSMDSATDRQLYVAVQE IIMQQQRQVSDVSPFESSSSSSSRVKRSFFSFGHGRGLRNVVLPIQLES*

Transcript Sequence

Transcript ID	Solyc09g089890.1.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	ATGGATCTTGTTAGACTAAAGTATTTTGAATCTTTTTCACATATGAAAAATCATACAATT AGTCCTCCAATTTTTGGTTCACCTATACATTCTTCATCAAATCATGCTGGATTTCCAATT ATAGCAGTTGCTATTATTGGAATATTAGCAACTTGTGTTTTACTAGTTAGCTACTACATT TTTGTGATAAAATGTTGTTTGAATTGGCACAGAATTGATCTCTTGAGACGATTTTCGATC TCAAGAAATCGCCGTGTTGAAGACCCTTTAATGATTTACTCACCAGCAGTAGAGAATAGG GGATTAGACGAATCAGTGATTCGTTCAATCCCCGTATTTAAGTACAAGAAAAGGGAAGAA AATTCAAGAATTCATAGTGAATGTGTTGTTTGTTTAAATGAATTTCAAGAAAATGAAAAG CTAAGAGTCATACCAAATTGTGCACATATTTTTCATATTGATTGTATTGATGTTTGGTTA CAAAACAATGCAAATTGTCCACTTTGTAGAAATAGTATTTCATCATGTACAACAATTAGT AACACAAAGTTATTGTTGGATCCAATCATTGCTCCAAGTTCAACACCTTATCAAGATCCA AATCTTGAAAATTTTAGAGATGATGATTATGTTGTGATTGAAATATCAAACAATAATCAA GAAAGGTTGATGATGAATAATAATACAGGGGAAACAACAGGGCATTTTTCGCCACGAAAA AAAGAACAACAAAAGGTTTCATCAAGAAAATGTAACAAGTTTAGACATGTAACAAGTATG GGAGATGAGTGTATAAATATGAGGAAGAAAGATGATGAGTTTGATTCAATTCAGCCTATA AGAAGATCATTTTCAATGGATTCAGCGACGGATCGACAACTTTACGTAGCTGTTCAAGAG ATTATAATGCAGCAACAAAGGCAAGTGAGTGATGTTAGTCCCTTTGAAAGTAGTAGTAGT AGTAGTAGTAGAGTAAAAAGATCATTTTTTTCATTTGGACATGGAAGGGGATTAAGAAAT GTAGTTTTACCTATTCAGTTAGAGTCATAA