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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g089820.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

ATGGATTATGAAGAAGGATGGGCTGAGATAAAGGCTATTGACGATACAAAGGCTGGTGTT
AAGGGACTCGTCGATACTGGAGTAGTCGAGATTCCAAGAATTTTCGTTAGGCCACCTCAT
GAACTTGCTGAGGAATTGAATATGTGCAAGTCGTCAACTCTACAGGTTCCGGTGGTTGAT
CTAAGTGGCGTAGAATTTGAAGATCGACGTAAGAAGATTGTTGATGAAATAAGGGAAGCA
TGTGAGAAATGGGGATTTCTCCAGGTGATAAATCATGGGATTCCTTCAAGTGTTTTGGAA
GGAATGATCGATGGGATTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTAC
TATTCGTCTGATCTAACTCGAGAAGTTAGATACGATAGTAATCTTCACGTGTACAAAACA
AAAGGAACAAGTGTTAGCTGGAAAGATACACTCTTCATCTCTGCTGTAGTTTCTAAACCC
GAACAAATACCACGAGTTTGCAGGAAAACATCCCTCGAGTACATAAATCATGTCAAGAAA
CTAGCCGACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCACTTG
AAAACCGCGGAATGTGATAAAGGACAAGTGTTGGCATGCCATTACTACCCGGCATGCCCA
CAACCAGAGCTAACTCTTGGTACCGCTAAGCATTCAGATCCTAGCTTCATTACGATTGTG
CTTCAAGATCAGAGTGGTGGGCTACAAGTCATGCATGACAACCAATTAGCCGATGTTACA
CCGATTAAACATGGTTTGGTTGTTAATATTGGTGACCTTCTTCAGATCCTATCGAATGAC
AAGTTTGTAAGTGCAAATCATAGAGTTGTAGCAAACAAAATACGACCAAGGATTTCAGTG
GCATCCTTCTTCAATGGTCTTTTAGCACCTTCAAAGATGTATGGTCCAATCGAAGAGCTC
ATATCTGAAGAAAACCCCCCACTATATAAAAATTTTCAAGTAGTTGATTATGTTACCAAG
TTTTTCTCGAAGCCTCTCGATGAGACTGCTCTTGATCTTTTCAGACTGAAGAGAGACAGA
TCACCATAA

Peptide Sequence

PEP ID

Solyc09g089820.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

MDYEEGWAEIKAIDDTKAGVKGLVDTGVVEIPRIFVRPPHELAEELNMCKSSTLQVPVVD
LSGVEFEDRRKKIVDEIREACEKWGFLQVINHGIPSSVLEGMIDGIRKFHEQDVEVKKEY
YSSDLTREVRYDSNLHVYKTKGTSVSWKDTLFISAVVSKPEQIPRVCRKTSLEYINHVKK
LADILLGLLSEALGLKPDHLKTAECDKGQVLACHYYPACPQPELTLGTAKHSDPSFITIV
LQDQSGGLQVMHDNQLADVTPIKHGLVVNIGDLLQILSNDKFVSANHRVVANKIRPRISV
ASFFNGLLAPSKMYGPIEELISEENPPLYKNFQVVDYVTKFFSKPLDETALDLFRLKRDR
SP*

Transcript Sequence

Transcript ID

Solyc09g089820.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

ATAAGAAGGAAGACGATCTGGAAGTGAATTAGCAATGGATTATGAAGAAGGATGGGCTGA
GATAAAGGCTATTGACGATACAAAGGCTGGTGTTAAGGGACTCGTCGATACTGGAGTAGT
CGAGATTCCAAGAATTTTCGTTAGGCCACCTCATGAACTTGCTGAGGAATTGAATATGTG
CAAGTCGTCAACTCTACAGGTTCCGGTGGTTGATCTAAGTGGCGTAGAATTTGAAGATCG
ACGTAAGAAGATTGTTGATGAAATAAGGGAAGCATGTGAGAAATGGGGATTTCTCCAGGT
GATAAATCATGGGATTCCTTCAAGTGTTTTGGAAGGAATGATCGATGGGATTCGTAAATT
TCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCGTCTGATCTAACTCGAGAAGT
TAGATACGATAGTAATCTTCACGTGTACAAAACAAAAGGAACAAGTGTTAGCTGGAAAGA
TACACTCTTCATCTCTGCTGTAGTTTCTAAACCCGAACAAATACCACGAGTTTGCAGGAA
AACATCCCTCGAGTACATAAATCATGTCAAGAAACTAGCCGACATTCTTCTTGGCTTACT
ATCAGAAGCTCTTGGGCTAAAACCTGACCACTTGAAAACCGCGGAATGTGATAAAGGACA
AGTGTTGGCATGCCATTACTACCCGGCATGCCCACAACCAGAGCTAACTCTTGGTACCGC
TAAGCATTCAGATCCTAGCTTCATTACGATTGTGCTTCAAGATCAGAGTGGTGGGCTACA
AGTCATGCATGACAACCAATTAGCCGATGTTACACCGATTAAACATGGTTTGGTTGTTAA
TATTGGTGACCTTCTTCAGATCCTATCGAATGACAAGTTTGTAAGTGCAAATCATAGAGT
TGTAGCAAACAAAATACGACCAAGGATTTCAGTGGCATCCTTCTTCAATGGTCTTTTAGC
ACCTTCAAAGATGTATGGTCCAATCGAAGAGCTCATATCTGAAGAAAACCCCCCACTATA
TAAAAATTTTCAAGTAGTTGATTATGTTACCAAGTTTTTCTCGAAGCCTCTCGATGAGAC
TGCTCTTGATCTTTTCAGACTGAAGAGAGACAGATCACCATAA