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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g089790.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

ATGGAATATGATCGCTTGATGGAATTAAAAGCGTTTGATGATACAAAAACTGGTGTTAAA
GGATTAGTTGATTCCGGAATTGTGGAAATTCCAAGAATATTCATTAGGCCATCTGATGAA
CTTGTTCAAGAGTTGACTCATGGTAAGCCAACTCTGCATTGTCCTGTGATAGATTTCAGT
GGCATAGAAGTTCAAGATCATCGTAACAAGGTTGTCGATGAAATAAGGGAAGCATCAGAA
AAGTGGGGATTTTTCCAACTGATAAATCATGGGATTCCTTCAAGTGTATTGGAAAGAATG
ATTGATGGGATTCGTAAATTTCACGAACAAGATGCTGAGGTAAAGAAAGAGTACTATTCG
CGTGATTTCACATCGAGAAGAGTAAGATATGAGAGCAACTTTGATCTTTATCAATCGAAA
TCTGCAAACTGGAGGGATACATTGAACATTTCTTTGCTACATTCAAGTCATATCGAACCA
GAAGAACTACCAGCAGTTTGCAGGAACGTAATTGTTGAGTATATAAATCACGTTACAAAG
CTAGGAGAAACTATATTCTGCATTTTATCAGAAGCGCTCGGGCTAAAACCAGATCACTTG
AAAGAAATGGAATGTAATAAAGGAAAATCAGTAGTATGCCATTACTATCCAGCATGCCCA
CAGCCAGAGCTAACTCTTGGCGCTGCGAACCATACAGATCCTTCTTTCCTTACTGTTCTG
CTTCAAGATCAAATTGGTGGCCTTCAAGTCCTGCACAATAACCAATGGATCGATGTTAAA
CCGGTATCACAAGGATTGGTTGTTAATATTGGCGAAGCACTTCAGATCCTATCAAATGAC
AAGTTTGTGAGTGCTAATCATAGAGTTTTAGCGAATGGGGTAGGACCAAGAATGTCAGTG
GCATGCTTCTTCAATGGTAGTTTTGCACAACCAAAGATCTACGGTCCAATCAAGGATCTA
ATATCAGATGAAAATCCCCTTTTGTATAAAGAATTTACAGTAACTGATTACATTGCTAAG
TTTATGTCCAGGCCTCTTGGTACATCTGCACTTGACCTTTTTAGACTCTGA

Peptide Sequence

PEP ID

Solyc09g089790.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

MEYDRLMELKAFDDTKTGVKGLVDSGIVEIPRIFIRPSDELVQELTHGKPTLHCPVIDFS
GIEVQDHRNKVVDEIREASEKWGFFQLINHGIPSSVLERMIDGIRKFHEQDAEVKKEYYS
RDFTSRRVRYESNFDLYQSKSANWRDTLNISLLHSSHIEPEELPAVCRNVIVEYINHVTK
LGETIFCILSEALGLKPDHLKEMECNKGKSVVCHYYPACPQPELTLGAANHTDPSFLTVL
LQDQIGGLQVLHNNQWIDVKPVSQGLVVNIGEALQILSNDKFVSANHRVLANGVGPRMSV
ACFFNGSFAQPKIYGPIKDLISDENPLLYKEFTVTDYIAKFMSRPLGTSALDLFRL*

Transcript Sequence

Transcript ID

Solyc09g089790.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

TGAATATTGATTCACATTGGATCACATTATTTATGAGCACAAGTTGACTTTTAACTAACT
TATTTATTGCTCAAGAATCTTTCCCTTATTGAAATTAAGAACACATATGTCCAGAATTGC
AGTCTCAAGCTGAATTAACAATGGAATATGATCGCTTGATGGAATTAAAAGCGTTTGATG
ATACAAAAACTGGTGTTAAAGGATTAGTTGATTCCGGAATTGTGGAAATTCCAAGAATAT
TCATTAGGCCATCTGATGAACTTGTTCAAGAGTTGACTCATGGTAAGCCAACTCTGCATT
GTCCTGTGATAGATTTCAGTGGCATAGAAGTTCAAGATCATCGTAACAAGGTTGTCGATG
AAATAAGGGAAGCATCAGAAAAGTGGGGATTTTTCCAACTGATAAATCATGGGATTCCTT
CAAGTGTATTGGAAAGAATGATTGATGGGATTCGTAAATTTCACGAACAAGATGCTGAGG
TAAAGAAAGAGTACTATTCGCGTGATTTCACATCGAGAAGAGTAAGATATGAGAGCAACT
TTGATCTTTATCAATCGAAATCTGCAAACTGGAGGGATACATTGAACATTTCTTTGCTAC
ATTCAAGTCATATCGAACCAGAAGAACTACCAGCAGTTTGCAGGAACGTAATTGTTGAGT
ATATAAATCACGTTACAAAGCTAGGAGAAACTATATTCTGCATTTTATCAGAAGCGCTCG
GGCTAAAACCAGATCACTTGAAAGAAATGGAATGTAATAAAGGAAAATCAGTAGTATGCC
ATTACTATCCAGCATGCCCACAGCCAGAGCTAACTCTTGGCGCTGCGAACCATACAGATC
CTTCTTTCCTTACTGTTCTGCTTCAAGATCAAATTGGTGGCCTTCAAGTCCTGCACAATA
ACCAATGGATCGATGTTAAACCGGTATCACAAGGATTGGTTGTTAATATTGGCGAAGCAC
TTCAGATCCTATCAAATGACAAGTTTGTGAGTGCTAATCATAGAGTTTTAGCGAATGGGG
TAGGACCAAGAATGTCAGTGGCATGCTTCTTCAATGGTAGTTTTGCACAACCAAAGATCT
ACGGTCCAATCAAGGATCTAATATCAGATGAAAATCCCCTTTTGTATAAAGAATTTACAG
TAACTGATTACATTGCTAAGTTTATGTCCAGGCCTCTTGGTACATCTGCACTTGACCTTT
TTAGACTCTGACGAAACATAAAAAATCTACATTACCAAGCAGCGACAAACGCCATCAGTA
TAGTCCTTCTAAAGACCGATGATTGTTGTTGATTAAAGTATGTTTTCATTTGTAATAATG
TTTTACATACGAGTACTGGAAGAATATGCAGCTTATCCCTTTATATGTAAGCATTTCATA
TTGAATAAAATATCAGCATTTTGTTTGGAT