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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g089690.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

ATGGTTTTCTCCATGAATGAAGAATTTCAGGCTACATTACAGCCAAATTATGATAAACAT
AGTGAATTAAAAGCCTTTGATGACACAAAAGCTGGTGTCAAAGGACTTGTTGATGCTTGC
AATAGTACTGAAGTGCCTCGAATATTCGTTCATCCACGAGAAAGCATACAAAACTCCCCA
GGCTATACTGAGGAGGAGTTTGTTTTTCCTGTAATAGATCTTGAAGGCATTGATCATCCA
ATAAGGCATAAAGATATAGTTGACAAAGTTCGAGATGCATCAGAGACATGGGGATTTTTT
CAAGTAGTCAATCATGACATTCCATTACCTGTCCTTGAAGAAATGTTGCAAGGAGCACGA
AGATTTTTCGAGCAAGATGTGGAGATAAAGAAACGATATTACACTCGAGATACTACGAAG
AAAGTAGCACATGTTAGCAACTTTGATTTGTTTAGCCCCTCTGTTCCAGCAGCTAGCTGG
AGAGACTCACTTTACTGTTTTATGTGTCCTAATCCTCCTAGTCCAGAGGAATTTCCCACA
GTATGTAGGGAGATTTTGATTGAATTCTCTAAGAAGATGATGAAATTAGGCTGCTCATTA
TTTGAGTTATTGTCCGAGGGTCTCGGTCTCAATCCTTGTCATCTTAAAGATATGAACTGT
GCTGAAGGGCTATCTATTGCCCAACATTACTATCCAGCATGTCCTCAGCCGGAACTCACC
ATAGGCACCAGACAGCATTCGGACTGTGTTTTCATTACCGTGCTTCTTCAAGATGATATA
GGAGGTCTCCAAGTCCGTCACCAAAATCAGTGGATTGATGTTCCTCCTACACGTGGTGCT
CTAGTCGTGAATATTGGAGATCTGTTACAGCTCATATCGAATGACAAGTATATAAGTGTT
GAGCATAGAGTATTGTCGAACAAAGTAGGTCCAAGAATATCAGTGCCGTGTTTCTTCAGC
ACTGGTGCATTTCCCTCTCCAAGGATTTATGGACCAATTAAGGAATTGTTATCAGAATGT
AATCCTCCAAAGTATCGTGCAACCACAGTGAAGGAATATACAGACTATTTCCGCAAGAAA
GGCTTCGATGGAACTTCTACACTGCTGGATTACAAGATCCCGTCCTAA

Peptide Sequence

PEP ID

Solyc09g089690.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

MVFSMNEEFQATLQPNYDKHSELKAFDDTKAGVKGLVDACNSTEVPRIFVHPRESIQNSP
GYTEEEFVFPVIDLEGIDHPIRHKDIVDKVRDASETWGFFQVVNHDIPLPVLEEMLQGAR
RFFEQDVEIKKRYYTRDTTKKVAHVSNFDLFSPSVPAASWRDSLYCFMCPNPPSPEEFPT
VCREILIEFSKKMMKLGCSLFELLSEGLGLNPCHLKDMNCAEGLSIAQHYYPACPQPELT
IGTRQHSDCVFITVLLQDDIGGLQVRHQNQWIDVPPTRGALVVNIGDLLQLISNDKYISV
EHRVLSNKVGPRISVPCFFSTGAFPSPRIYGPIKELLSECNPPKYRATTVKEYTDYFRKK
GFDGTSTLLDYKIPS*

Transcript Sequence

Transcript ID

Solyc09g089690.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence

TTTTAAATAAAAACTTATCTTAGCTTTATTTAGGTGTTTTCCAGCTATATGATGCGTCCT
TTATCTTTCCAAAAGAGTGGACATAATTCTCTCAAGATAGGGGCGGAGCTAGATGGGCTC
GAAGAGTAATGTATATACAATATTAGTTGAATTTTTTTTATATTTATTTTTTCATATTCG
AATCTCGTTATTTTAGTGAAAATCTTGACTTTGCCATTTGCCGTTCAGATTTGTCCATCT
TATAATCTCACAAGTGAAGTAACTTTGTATTTACAATAGTAATGAAAAAGTAGAAGAAAA
GATGGTTTTCTCCATGAATGAAGAATTTCAGGCTACATTACAGCCAAATTATGATAAACA
TAGTGAATTAAAAGCCTTTGATGACACAAAAGCTGGTGTCAAAGGACTTGTTGATGCTTG
CAATAGTACTGAAGTGCCTCGAATATTCGTTCATCCACGAGAAAGCATACAAAACTCCCC
AGGCTATACTGAGGAGGAGTTTGTTTTTCCTGTAATAGATCTTGAAGGCATTGATCATCC
AATAAGGCATAAAGATATAGTTGACAAAGTTCGAGATGCATCAGAGACATGGGGATTTTT
TCAAGTAGTCAATCATGACATTCCATTACCTGTCCTTGAAGAAATGTTGCAAGGAGCACG
AAGATTTTTCGAGCAAGATGTGGAGATAAAGAAACGATATTACACTCGAGATACTACGAA
GAAAGTAGCACATGTTAGCAACTTTGATTTGTTTAGCCCCTCTGTTCCAGCAGCTAGCTG
GAGAGACTCACTTTACTGTTTTATGTGTCCTAATCCTCCTAGTCCAGAGGAATTTCCCAC
AGTATGTAGGGAGATTTTGATTGAATTCTCTAAGAAGATGATGAAATTAGGCTGCTCATT
ATTTGAGTTATTGTCCGAGGGTCTCGGTCTCAATCCTTGTCATCTTAAAGATATGAACTG
TGCTGAAGGGCTATCTATTGCCCAACATTACTATCCAGCATGTCCTCAGCCGGAACTCAC
CATAGGCACCAGACAGCATTCGGACTGTGTTTTCATTACCGTGCTTCTTCAAGATGATAT
AGGAGGTCTCCAAGTCCGTCACCAAAATCAGTGGATTGATGTTCCTCCTACACGTGGTGC
TCTAGTCGTGAATATTGGAGATCTGTTACAGCTCATATCGAATGACAAGTATATAAGTGT
TGAGCATAGAGTATTGTCGAACAAAGTAGGTCCAAGAATATCAGTGCCGTGTTTCTTCAG
CACTGGTGCATTTCCCTCTCCAAGGATTTATGGACCAATTAAGGAATTGTTATCAGAATG
TAATCCTCCAAAGTATCGTGCAACCACAGTGAAGGAATATACAGACTATTTCCGCAAGAA
AGGCTTCGATGGAACTTCTACACTGCTGGATTACAAGATCCCGTCCTAA