Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g089550.3.1
CDS Infomation

Zinc finger family protein (AHRD V3.3 *-* B9HF11_POPTR)
Sequence

ATGGCGGCACCCCAGAGAGATTTCAACATTGAAAATCAAGAAGAACCAAAATCAAAGATT
GTGTATTTAAACTACAGGCGAGTGCCAGCAGTAATCTTTCGAAAGAAGTATTGGGATTGG
AATAGCATGGTGGCGGTATGTAAACTTACAATGGTTGGAAAATTCTTTATACCTAAACCA
AAGATGACTAAAATTCGTGCTAGTTTCCATGCGAAACTCTCTCTTAAAGGGGTAGTGAAA
ATTAGGTCTTATGATTCTTACCATGTGTTTATTGATTTCACTGCTGAAGAGGATTATCAA
TCTGTTTTGTTGAAAGAGAGGGTTGTTGTTGCTGGTGCAATCATGGAGGTTTTTCAGTGG
ACTCCGGAGTTTCATGATCAATTTTTTGTGCTGAAGCTCTCAGTTGACAGTTTCTGTTTG
AGTTCCAAGAAGAGAGAAGCATTTGGTGTTGTAGAGCTAGAGAATACCAAAAAAGATGAA
CATATTGGTGGTGGAAATGAGTACGGGACAGAGGAGTCTGATTCAGTAGCTTGTGTCCCA
GAAGTAACTCATTCCGATTCCGAGGACAGAGTTGCAAGTCCTATCAAGTGTGAAACCTCT
AAACTACCTTCTTCCGTAGGAATTAGTTGCAGTGAATTTAGTGGCCTTTCATCTGCTCCA
TACAGAATTACTGGACGAATTCCTTCTGTTACATATGAAAGTTCATCGATGTGTTCCACA
GAGTTAGTTCCTTTCAGGGGGACTTATTTAAACCACAATAATTTAAAGTCATATAGCAGA
GAGTGGAATTATGGAAGTAAGCCAACTAGTGAAGCAGCTGATTTGGCTTGTGAAACACTT
AGTCAGCCATTATATGCTCTTTCAATTGTCGAGCGCCATGAGAATCAGAAATCAAGACCT
CCAATCGAAGTGCAACACTCGACCTATATGGGATACCCAACATTAACCTTTCCAAGACGC
TATGGTGAAAGCTTAGTATCCGATTATAAGCTCACTTTGCTAGGGAATTTCTCCTATAAG
AGGCCAAAAATGAAAGAAATTCGGGCTGATTTCAAAGCACAGAACCCTCTGAGTGGCCAA
GTAAAGATTAGGAATTGTTCTTCTCGGCAAGTATTGATTTTATTCTCCAATGAAGAGGAT
TACTACACTGTTTTGTACAAGAAAGCGATCATTGTTGCTGGTGCCCTCATGCAGATTTCC
TGGTCGTCTCCAGATTTCCACCATGAAGTAAAACAGAATATTCATCCTGATTTCAGATTA
AGTGATGCAAAATCTGTTAATTGGAATACAGACACCTCTAAGCTGCATCCTTCTATAAAT
GGCCTTTTAGCCCCTGCTACAGATGAAAAGTCCATGTCACTACAAGTGCCTGCCGTGTCC
CAATGCTTGAGTGTTCCTTCAATATGTCCACCATTACCATTATTGGCTCATTCAGTAAGT
GTAGCTGGTCGATTGTGTGCTGATCGTTTAACAACTTCAGGTATTTATGTTCCTCAGTCT
TATCCGAAAGGAATTGTGGGAATTCCTATTTTTGGAAGTAACGAACAAGCTGGCAGTGGA
AACACCTTTCCTAGGCCTAGCCAAGCCCTGAATCAGCAGAGTCTTGCTCAGCAGCATAAC
CAACTGAATTCATATAAACCAAATATGACTGTCAGGATAGCACAATTACAACCACCATCA
ACAACCTCAGTAAGTGACATTACCAGCTCAATCCGATACCGAGAATGTCTCAAGAATCAT
GCTGCAAGCATGGGAGGACATGCTCTTGATGGATGTGGAGAATTCATGCCTAGTGGAGAA
GAAGGGACCCCAGGAGCCCTGAAATGTGCAGCTTGTAATTGCCACCAAAATTTTCACAGG
AAAGAGATTGACGATTACCAACCGATGGATGATGTTGGGTCACATTCTAGGTTCAGTCAA
CCGAGAAATAATAGCAGTAGTGGCAGTATACAAAACCAAGTCTTGATTTCTCTTCCTACA
CAACAGTATCATCATGATTACAGTGATAGCTGTTCACCTAGATCATTGGTTGACTCTTTG
CAGCCTTATACTCAACCACCCTCGCCTACATCTGGTTCCGTATATTCACAACAGGCCTTG
GAAAGAATACAACCTAGTTCTATTCGATCAAGCTATTCATATGAAATGGTGAATCACAAT
ACCATGCAGAATGGAAAGCAACGGGAATATTTCTGGAGTGACAGCAGTAGGAATACATCA
CGAGATCATCCTTCCGTACGAAATGAAAATTGGAATTTTGACATGGACAAGCCTTTAAAC
AACAGAACCCCTGATCATATTCCATTGGAGTTTCCAACCTACCCGTCTAGGTGCCAGCCC
CAGACTGTATTCACTGATGAATTTCCACATCTTGACATAATTAACAACTTGCTACACGAA
GAGCATGAAACTGGACGGACTTTGATGTCCAACTCAGGCTCTCAGAGGTTGAACAAGGGA
TCATAA

Peptide Sequence

PEP ID

Solyc09g089550.3.1
PEP Infomation

Zinc finger family protein (AHRD V3.3 *-* B9HF11_POPTR)
Sequence

MAAPQRDFNIENQEEPKSKIVYLNYRRVPAVIFRKKYWDWNSMVAVCKLTMVGKFFIPKP
KMTKIRASFHAKLSLKGVVKIRSYDSYHVFIDFTAEEDYQSVLLKERVVVAGAIMEVFQW
TPEFHDQFFVLKLSVDSFCLSSKKREAFGVVELENTKKDEHIGGGNEYGTEESDSVACVP
EVTHSDSEDRVASPIKCETSKLPSSVGISCSEFSGLSSAPYRITGRIPSVTYESSSMCST
ELVPFRGTYLNHNNLKSYSREWNYGSKPTSEAADLACETLSQPLYALSIVERHENQKSRP
PIEVQHSTYMGYPTLTFPRRYGESLVSDYKLTLLGNFSYKRPKMKEIRADFKAQNPLSGQ
VKIRNCSSRQVLILFSNEEDYYTVLYKKAIIVAGALMQISWSSPDFHHEVKQNIHPDFRL
SDAKSVNWNTDTSKLHPSINGLLAPATDEKSMSLQVPAVSQCLSVPSICPPLPLLAHSVS
VAGRLCADRLTTSGIYVPQSYPKGIVGIPIFGSNEQAGSGNTFPRPSQALNQQSLAQQHN
QLNSYKPNMTVRIAQLQPPSTTSVSDITSSIRYRECLKNHAASMGGHALDGCGEFMPSGE
EGTPGALKCAACNCHQNFHRKEIDDYQPMDDVGSHSRFSQPRNNSSSGSIQNQVLISLPT
QQYHHDYSDSCSPRSLVDSLQPYTQPPSPTSGSVYSQQALERIQPSSIRSSYSYEMVNHN
TMQNGKQREYFWSDSSRNTSRDHPSVRNENWNFDMDKPLNNRTPDHIPLEFPTYPSRCQP
QTVFTDEFPHLDIINNLLHEEHETGRTLMSNSGSQRLNKGS*

Transcript Sequence

Transcript ID

Solyc09g089550.3.1
Transcript Infomation

Zinc finger family protein (AHRD V3.3 *-* B9HF11_POPTR)
Sequence

CAAAACGTAATATTGACTTGTACATATATATATAGAGCTGTACGTTTTGTCTTCCCTGCA
AACTCAATTCTGCACAGTAGAGTTTCAAATGGCGGCACCCCAGAGAGATTTCAACATTGA
AAATCAAGAAGAACCAAAATCAAAGATTGTGTATTTAAACTACAGGCGAGTGCCAGCAGT
AATCTTTCGAAAGAAGTATTGGGATTGGAATAGCATGGTGGCGGTATGTAAACTTACAAT
GGTTGGAAAATTCTTTATACCTAAACCAAAGATGACTAAAATTCGTGCTAGTTTCCATGC
GAAACTCTCTCTTAAAGGGGTAGTGAAAATTAGGTCTTATGATTCTTACCATGTGTTTAT
TGATTTCACTGCTGAAGAGGATTATCAATCTGTTTTGTTGAAAGAGAGGGTTGTTGTTGC
TGGTGCAATCATGGAGGTTTTTCAGTGGACTCCGGAGTTTCATGATCAATTTTTTGTGCT
GAAGCTCTCAGTTGACAGTTTCTGTTTGAGTTCCAAGAAGAGAGAAGCATTTGGTGTTGT
AGAGCTAGAGAATACCAAAAAAGATGAACATATTGGTGGTGGAAATGAGTACGGGACAGA
GGAGTCTGATTCAGTAGCTTGTGTCCCAGAAGTAACTCATTCCGATTCCGAGGACAGAGT
TGCAAGTCCTATCAAGTGTGAAACCTCTAAACTACCTTCTTCCGTAGGAATTAGTTGCAG
TGAATTTAGTGGCCTTTCATCTGCTCCATACAGAATTACTGGACGAATTCCTTCTGTTAC
ATATGAAAGTTCATCGATGTGTTCCACAGAGTTAGTTCCTTTCAGGGGGACTTATTTAAA
CCACAATAATTTAAAGTCATATAGCAGAGAGTGGAATTATGGAAGTAAGCCAACTAGTGA
AGCAGCTGATTTGGCTTGTGAAACACTTAGTCAGCCATTATATGCTCTTTCAATTGTCGA
GCGCCATGAGAATCAGAAATCAAGACCTCCAATCGAAGTGCAACACTCGACCTATATGGG
ATACCCAACATTAACCTTTCCAAGACGCTATGGTGAAAGCTTAGTATCCGATTATAAGCT
CACTTTGCTAGGGAATTTCTCCTATAAGAGGCCAAAAATGAAAGAAATTCGGGCTGATTT
CAAAGCACAGAACCCTCTGAGTGGCCAAGTAAAGATTAGGAATTGTTCTTCTCGGCAAGT
ATTGATTTTATTCTCCAATGAAGAGGATTACTACACTGTTTTGTACAAGAAAGCGATCAT
TGTTGCTGGTGCCCTCATGCAGATTTCCTGGTCGTCTCCAGATTTCCACCATGAAGTAAA
ACAGAATATTCATCCTGATTTCAGATTAAGTGATGCAAAATCTGTTAATTGGAATACAGA
CACCTCTAAGCTGCATCCTTCTATAAATGGCCTTTTAGCCCCTGCTACAGATGAAAAGTC
CATGTCACTACAAGTGCCTGCCGTGTCCCAATGCTTGAGTGTTCCTTCAATATGTCCACC
ATTACCATTATTGGCTCATTCAGTAAGTGTAGCTGGTCGATTGTGTGCTGATCGTTTAAC
AACTTCAGGTATTTATGTTCCTCAGTCTTATCCGAAAGGAATTGTGGGAATTCCTATTTT
TGGAAGTAACGAACAAGCTGGCAGTGGAAACACCTTTCCTAGGCCTAGCCAAGCCCTGAA
TCAGCAGAGTCTTGCTCAGCAGCATAACCAACTGAATTCATATAAACCAAATATGACTGT
CAGGATAGCACAATTACAACCACCATCAACAACCTCAGTAAGTGACATTACCAGCTCAAT
CCGATACCGAGAATGTCTCAAGAATCATGCTGCAAGCATGGGAGGACATGCTCTTGATGG
ATGTGGAGAATTCATGCCTAGTGGAGAAGAAGGGACCCCAGGAGCCCTGAAATGTGCAGC
TTGTAATTGCCACCAAAATTTTCACAGGAAAGAGATTGACGATTACCAACCGATGGATGA
TGTTGGGTCACATTCTAGGTTCAGTCAACCGAGAAATAATAGCAGTAGTGGCAGTATACA
AAACCAAGTCTTGATTTCTCTTCCTACACAACAGTATCATCATGATTACAGTGATAGCTG
TTCACCTAGATCATTGGTTGACTCTTTGCAGCCTTATACTCAACCACCCTCGCCTACATC
TGGTTCCGTATATTCACAACAGGCCTTGGAAAGAATACAACCTAGTTCTATTCGATCAAG
CTATTCATATGAAATGGTGAATCACAATACCATGCAGAATGGAAAGCAACGGGAATATTT
CTGGAGTGACAGCAGTAGGAATACATCACGAGATCATCCTTCCGTACGAAATGAAAATTG
GAATTTTGACATGGACAAGCCTTTAAACAACAGAACCCCTGATCATATTCCATTGGAGTT
TCCAACCTACCCGTCTAGGTGCCAGCCCCAGACTGTATTCACTGATGAATTTCCACATCT
TGACATAATTAACAACTTGCTACACGAAGAGCATGAAACTGGACGGACTTTGATGTCCAA
CTCAGGCTCTCAGAGGTTGAACAAGGGATCATAACACTATCAGAATGTGCATTCCACTTA
TCCGAGTGATATTGGTATGTTTACTGGTCTAGGTCCCTCATTAAGTTCTTGTAGGTGTCA
CTCTGGTCTTTAGATTTGCAGTGATTTTGCACTTCGTTAGCTTTGCCATCATCCCTGATA
TGAGTTGGTATTTCATTAGAGCTGAAGTATGTTAACTCCTTTTTGTGCAAATGTTATTAA
ATGACAACACTATTGTCATTTTGATGGTAATACTAGTTTTTATGGATTTTTTTAGAGTTA
TTATTTGCATACAGCTTAATATGGTAAAACAATCTGTGAAATTAATAATCTGGGCAAAAT
ATATATACACGAGCATTG