Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g083390.2.1
CDS Infomation	zinc knuckle (CCHC-type) family protein (AHRD V3.3 - AT5G43630.4)
Sequence	ATGACAAATATCAACGACGATGATATTGATTTAGGACTTGCTCTTGGTTGCACCACTACT CGTAATGTTCATACGAAGCTAAAAGACGCTGTAGGTGCAGGTGTAAATGCAAGCTCAACC GTGGATATGGCATTTGCAGAATCTGATCCCTTATCGGAATTAGTTTGGTCCCCTCGTAAA GGTTTGAGCCTCAAATGTGCTGAGAGTAGCTTAGCTGACAAAAAACCTTTTCGTCTGTGG AATGTGGGACCAACCACTTTGATTACCACACCATCACAAAGTAACAGATTTAAGGGGACT TATGATGAAAATGCTGCTTATGAGAAGATAATCGATCAAGAAAGGTTGGAGACCAAAAAA TTGGTATTGGAAAGTGGAAATGAAATTGGCTGCAGCAGCAAAGTGAAGATAATGAACGCT GCTGACGGAGTTGATATGGTAGACACTGATCAAGATGAGGAAAATGTGAAGAATACTGAG AAGGGCTTTTGTGTTCCGATAGTTGAAAGTTGTGAAAATGATGCAGGTGAAGGAGATTTT GGAACGGAGAGATTTCTGCTACATGGAGCCAGTTCCAAGGTTGATGCGGTAACCACTGAA CCTCTAGCAGGAAAAAATAATCAAGAAGTTTTGACTGGCAATAAGTGTAGAAATGAAGAT GTTTCCGGTGGCAGTCAGGCTCTAATTCCTACTGTCAAAGACTCGGAGAGCCCTGCATGT CTGCTTCCAAGTTCACCAATCAAAATGGAAGCAGACAACACATTAGAATCTACCGGTCTC CCAGTATTGGAGTGCACTGCTGAGAATGATCTACATATTCCAGGAATTATCGAGACTTGT GATCAGAATGAGGAGCAACTTCTTAGGGGAAGTTCTGTTCCACCTGAAACTCCTCCAACA CATAGCAGGTCCTCATCATATAGAAGGAAAGGCAAAGCAAAAGCATTGTCCGATGGAAAT TCCAATAACAAAATGTCAAATGATGAGGAAGATAGCCATGAGAGTGTAGAAAGCTGCAAC AGTACAGGGTTAAACCCAAAGGGTAAGAAACGTTGGCACTTTGAGAAGCAGTTTTTTGTC GGAAGTAAACGAATCAGAACGGATGTGCACCGGGATCCTTCTACAGAATCGACAGTTGCA CATAATAGCTCTTTTGTGACTTGGATTTCAAACATGGTAAAGGGCTTGCCTAAATCCAAT CTTGAAGACTCTCCTACTCTTGCTCTCACCTTTACTCCTAATAATGAGGAAAATCATGTA AAAGAGACTAATCATCAGGAAATTGTTGCGTATGAGAAAGATCATGATTCTGCTAGCAGG TCAATGGGGTTCCAATCTTTGTTTCAGTCTCTATACTGTCCAACCTTAAAGGTGTCTGAA ACAGAAATACCAAAAGAGGATCACTCAGTGGGAGAACCTAAAAAGATCCCATCAGCTGAC AAAATCCTCATTGATTTTCCACTAATATCCTGCCATCGAGAAGGTGATATGTTAGATACA CACATGCTAATGTCTAATGACAAATCCAACCAATCTACAGTGGCTTGCAAGGAAGTTCCA CTGATGCAAACTCATATTATGCCAGCAGTTGTTGCTCCTCGGGAGGTTAGTAGAAACACT TCTGTAGAAAACAAAGCTTCTAATGACTCGTTATCTAGACTTAGAACAAGCATTTGTGAG GAAAAAAATACCTCCCATTCATCTGAATATGACATGTCTAGTAGAAATCAGTCTCTTCGT AGCCTGTGGATTACTAGATTCTCCAACAAGACTCCTGGAACTGTTGTGAACATAGATGAT TCCAAGCCAACTACACATGAAACAAGTGTGGAGTGTCGGATTGAACAGGCAAGCTCCGAT GTAAAGGGGACTTCGGATAAAGACCAACACGATGATGTTGCAGCCAGCTCAAAAGAGATT CGTGACAATAATTTTGAAAGGTCCATGAATAATCTGCATCCCATTGTATCTTCTCCCAAG TTCAAGAAGTCAGAGGCACTGTCCTCACTGTTTTCTAGGAGATTGGATGCCCTTAAACTC ATAGGACCTTTTTCAACAAGAAATGAGTATAGCAGTAGCTACACAAGAACAACTTGTTTC TTCTGTGGCAAAAGTGGCCATGACTTACGCAACTGTTCAGAGGTGACAGAATCTGAATTG GAAGTTCTTATTAGAAGCATCAGGGCTTACGAAGGCGCTGAGGGATCTTCTTGTTTGTGC ATTAGATGTTTTCAGCTTGATCATTGGGCTATTTCCTGCCCAACTTCAGCTTCAAACAGG GGCAACAATTTGCGGGTCGTATCTGTCAACGAATGTTTGCCTAGCCAACTTGAAATAAAG CAAAGTCATCCCATCGAACTTGCTAATCGTGTTCATCACAGTAGAGATAAATCATCTAGT GACTTGATGCACAAGAGAAAGCAGTTTTTGTTTGCAATAACTTCTGGTTCCAACCAAGTT CCGAAGCAGAGAACGTCTGAATCCACGGAGAACAGTTTGAAAGAACATATAATTTCTTCC AATTTTGTTAGTAAGGAGATAGCAGTTGTTCCAAAAGGAATTTTCGATGTCATCAGGGGT CTTCGGTTGTCTCGTATAGATATTCTCAAATGGATGAATTCCCACACTTCACTATCGCAT TTGGACGGGTTTTTCTTGCGTTTGAGACTAGGGAGGTCAGAAGCAGGGCTGGGGGGTACA GGATATTATGTTGCATGCATTAATGGTCTCAAAGGAGAAAAATTAGAGAGAGATTCCAAT AACTGCATCTGTGTTGATGTTTGTGGAGTCAAATGCCCTGTGGGAAGCCAGTATATCTCC AACCAAGACTTTTTGGAGGATGAACTATCCACTTGGTGGCACAAAATGTTGGAGAGTGGT GGAAAGGTTCCTGAAGAAAGTGATTTAAGGCTAAAACTTGACGAGCGGATGAAACTAGGG TTCTAA

Peptide Sequence

PEP ID	Solyc09g083390.2.1
PEP Infomation	zinc knuckle (CCHC-type) family protein (AHRD V3.3 - AT5G43630.4)
Sequence	MTNINDDDIDLGLALGCTTTRNVHTKLKDAVGAGVNASSTVDMAFAESDPLSELVWSPRK GLSLKCAESSLADKKPFRLWNVGPTTLITTPSQSNRFKGTYDENAAYEKIIDQERLETKK LVLESGNEIGCSSKVKIMNAADGVDMVDTDQDEENVKNTEKGFCVPIVESCENDAGEGDF GTERFLLHGASSKVDAVTTEPLAGKNNQEVLTGNKCRNEDVSGGSQALIPTVKDSESPAC LLPSSPIKMEADNTLESTGLPVLECTAENDLHIPGIIETCDQNEEQLLRGSSVPPETPPT HSRSSSYRRKGKAKALSDGNSNNKMSNDEEDSHESVESCNSTGLNPKGKKRWHFEKQFFV GSKRIRTDVHRDPSTESTVAHNSSFVTWISNMVKGLPKSNLEDSPTLALTFTPNNEENHV KETNHQEIVAYEKDHDSASRSMGFQSLFQSLYCPTLKVSETEIPKEDHSVGEPKKIPSAD KILIDFPLISCHREGDMLDTHMLMSNDKSNQSTVACKEVPLMQTHIMPAVVAPREVSRNT SVENKASNDSLSRLRTSICEEKNTSHSSEYDMSSRNQSLRSLWITRFSNKTPGTVVNIDD SKPTTHETSVECRIEQASSDVKGTSDKDQHDDVAASSKEIRDNNFERSMNNLHPIVSSPK FKKSEALSSLFSRRLDALKLIGPFSTRNEYSSSYTRTTCFFCGKSGHDLRNCSEVTESEL EVLIRSIRAYEGAEGSSCLCIRCFQLDHWAISCPTSASNRGNNLRVVSVNECLPSQLEIK QSHPIELANRVHHSRDKSSSDLMHKRKQFLFAITSGSNQVPKQRTSESTENSLKEHIISS NFVSKEIAVVPKGIFDVIRGLRLSRIDILKWMNSHTSLSHLDGFFLRLRLGRSEAGLGGT GYYVACINGLKGEKLERDSNNCICVDVCGVKCPVGSQYISNQDFLEDELSTWWHKMLESG GKVPEESDLRLKLDERMKLGF*

Transcript Sequence

Transcript ID	Solyc09g083390.2.1
Transcript Infomation	zinc knuckle (CCHC-type) family protein (AHRD V3.3 - AT5G43630.4)
Sequence	ATATTTTTATAGTGATAAAATTATCTCATTAAGAATAAGATTTAAATTTCAGTGTACTAT TATTAAATAATCTTTTTTACGGTACCATCCCATTAAATTACATTTTTATGTTAACATTAA TAACATATCTAATATAATTCACATAGAGTGAAGTTTTATTCTTTACATATTATTAAAAAA AATACGATAAATTTTAAATTTTTAAATTCAATCTCATAATTTCAAATTACCCTATAACAA TGACTAATATAACGTAAATTGTAAAATAAAAAAAATATCTTTCTAAATAAAATGTCATTC ATGATGCAACAATAACAATTCGGCTCCTCGCACGTAACAAATAATAATAATAATAACAAT AATTTGACTCTTTAATCGTCCGATACTAACACAATTATGTATATCTAAATTTTATTGCGT CAATCGTGATAATGATTATAAAGAAATAAAATATAAATAAAAAAGTATATTTTTTCATAT CGAAATTCACTGGTTTGGAACAGTCCACGTAGCATTTTTCTCAACCACTAGTCAATAAAG TGTGTATACTGTCTTTGGGACTTTACAATTTTTGACAATATTTGTTTTTTTCTTCTTCTA CAATACAAAAATAAAAAATAAAAAAATAACATATTGTACATACCAAAATTATTACTATAT ATTTTTTTGCAATTTCTTTAAGTATCTCAATTTCATCCTCTGTTTTCTTTACATATCAAG AAAAAAAACACCTTTTTTTTTAATTAAAAAAATGGTTACTTTTTTAGTGTACTTGTAAAA ATGGAGGTGGAATTGTAAGAAATGATAAAGTTTTGATTTTTAAGAGAGATAAAAGAGTTT GCTATGGATTTTTGGAAAAAAAGGCTTCCTTACAAGCTGTTGTAGTCTGTCTTGCTGATG ACAAATATCAACGACGATGATATTGATTTAGGACTTGCTCTTGGTTGCACCACTACTCGT AATGTTCATACGAAGCTAAAAGACGCTGTAGGTGCAGGTGTAAATGCAAGCTCAACCGTG GATATGGCATTTGCAGAATCTGATCCCTTATCGGAATTAGTTTGGTCCCCTCGTAAAGGT TTGAGCCTCAAATGTGCTGAGAGTAGCTTAGCTGACAAAAAACCTTTTCGTCTGTGGAAT GTGGGACCAACCACTTTGATTACCACACCATCACAAAGTAACAGATTTAAGGGGACTTAT GATGAAAATGCTGCTTATGAGAAGATAATCGATCAAGAAAGGTTGGAGACCAAAAAATTG GTATTGGAAAGTGGAAATGAAATTGGCTGCAGCAGCAAAGTGAAGATAATGAACGCTGCT GACGGAGTTGATATGGTAGACACTGATCAAGATGAGGAAAATGTGAAGAATACTGAGAAG GGCTTTTGTGTTCCGATAGTTGAAAGTTGTGAAAATGATGCAGGTGAAGGAGATTTTGGA ACGGAGAGATTTCTGCTACATGGAGCCAGTTCCAAGGTTGATGCGGTAACCACTGAACCT CTAGCAGGAAAAAATAATCAAGAAGTTTTGACTGGCAATAAGTGTAGAAATGAAGATGTT TCCGGTGGCAGTCAGGCTCTAATTCCTACTGTCAAAGACTCGGAGAGCCCTGCATGTCTG CTTCCAAGTTCACCAATCAAAATGGAAGCAGACAACACATTAGAATCTACCGGTCTCCCA GTATTGGAGTGCACTGCTGAGAATGATCTACATATTCCAGGAATTATCGAGACTTGTGAT CAGAATGAGGAGCAACTTCTTAGGGGAAGTTCTGTTCCACCTGAAACTCCTCCAACACAT AGCAGGTCCTCATCATATAGAAGGAAAGGCAAAGCAAAAGCATTGTCCGATGGAAATTCC AATAACAAAATGTCAAATGATGAGGAAGATAGCCATGAGAGTGTAGAAAGCTGCAACAGT ACAGGGTTAAACCCAAAGGGTAAGAAACGTTGGCACTTTGAGAAGCAGTTTTTTGTCGGA AGTAAACGAATCAGAACGGATGTGCACCGGGATCCTTCTACAGAATCGACAGTTGCACAT AATAGCTCTTTTGTGACTTGGATTTCAAACATGGTAAAGGGCTTGCCTAAATCCAATCTT GAAGACTCTCCTACTCTTGCTCTCACCTTTACTCCTAATAATGAGGAAAATCATGTAAAA GAGACTAATCATCAGGAAATTGTTGCGTATGAGAAAGATCATGATTCTGCTAGCAGGTCA ATGGGGTTCCAATCTTTGTTTCAGTCTCTATACTGTCCAACCTTAAAGGTGTCTGAAACA GAAATACCAAAAGAGGATCACTCAGTGGGAGAACCTAAAAAGATCCCATCAGCTGACAAA ATCCTCATTGATTTTCCACTAATATCCTGCCATCGAGAAGGTGATATGTTAGATACACAC ATGCTAATGTCTAATGACAAATCCAACCAATCTACAGTGGCTTGCAAGGAAGTTCCACTG ATGCAAACTCATATTATGCCAGCAGTTGTTGCTCCTCGGGAGGTTAGTAGAAACACTTCT GTAGAAAACAAAGCTTCTAATGACTCGTTATCTAGACTTAGAACAAGCATTTGTGAGGAA AAAAATACCTCCCATTCATCTGAATATGACATGTCTAGTAGAAATCAGTCTCTTCGTAGC CTGTGGATTACTAGATTCTCCAACAAGACTCCTGGAACTGTTGTGAACATAGATGATTCC AAGCCAACTACACATGAAACAAGTGTGGAGTGTCGGATTGAACAGGCAAGCTCCGATGTA AAGGGGACTTCGGATAAAGACCAACACGATGATGTTGCAGCCAGCTCAAAAGAGATTCGT GACAATAATTTTGAAAGGTCCATGAATAATCTGCATCCCATTGTATCTTCTCCCAAGTTC AAGAAGTCAGAGGCACTGTCCTCACTGTTTTCTAGGAGATTGGATGCCCTTAAACTCATA GGACCTTTTTCAACAAGAAATGAGTATAGCAGTAGCTACACAAGAACAACTTGTTTCTTC TGTGGCAAAAGTGGCCATGACTTACGCAACTGTTCAGAGGTGACAGAATCTGAATTGGAA GTTCTTATTAGAAGCATCAGGGCTTACGAAGGCGCTGAGGGATCTTCTTGTTTGTGCATT AGATGTTTTCAGCTTGATCATTGGGCTATTTCCTGCCCAACTTCAGCTTCAAACAGGGGC AACAATTTGCGGGTCGTATCTGTCAACGAATGTTTGCCTAGCCAACTTGAAATAAAGCAA AGTCATCCCATCGAACTTGCTAATCGTGTTCATCACAGTAGAGATAAATCATCTAGTGAC TTGATGCACAAGAGAAAGCAGTTTTTGTTTGCAATAACTTCTGGTTCCAACCAAGTTCCG AAGCAGAGAACGTCTGAATCCACGGAGAACAGTTTGAAAGAACATATAATTTCTTCCAAT TTTGTTAGTAAGGAGATAGCAGTTGTTCCAAAAGGAATTTTCGATGTCATCAGGGGTCTT CGGTTGTCTCGTATAGATATTCTCAAATGGATGAATTCCCACACTTCACTATCGCATTTG GACGGGTTTTTCTTGCGTTTGAGACTAGGGAGGTCAGAAGCAGGGCTGGGGGGTACAGGA TATTATGTTGCATGCATTAATGGTCTCAAAGGAGAAAAATTAGAGAGAGATTCCAATAAC TGCATCTGTGTTGATGTTTGTGGAGTCAAATGCCCTGTGGGAAGCCAGTATATCTCCAAC CAAGACTTTTTGGAGGATGAACTATCCACTTGGTGGCACAAAATGTTGGAGAGTGGTGGA AAGGTTCCTGAAGAAAGTGATTTAAGGCTAAAACTTGACGAGCGGATGAAACTAGGGTTC TAAGAACTCATCACAACACACACCAAGTTTCGAGTTTGGTTTGTCGAAAGCCAAACCAAG AAATCAGCTATTCCCCCATCTTGTAAATAAGATTTTGGGTGCTATTTCACAAATTCTTTG TTTCTTCTTTATTTGGTATTCTAGACTTTTGAGATTTGAGAGTTCTTTTTAGTGATCATC TTATGTATATAGATGAATGTATTTGTTATCACAAGGCTTTTGAAATGTTAAATTTAGATA ACATGAGAAATATTGTTTGAAAAAAAAGAGGAAGTTGTTGTTGTTGTTGATAAAGAACAT TATTTTCCATTATGAGGCATATTGATCTTTTTTTTTTGTTTAGACTTTGGACAAGTAGTA TATATTCCATGATAAAGTGCTTTGTGAGAGTTTTGATGGAATTATTTTTGGTCTTTTTTA CTTTGATAATCTTGTGAGAATATAAAAGATGTCCACAAG