Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g083350.3.1
CDS Infomation	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A0B0N0F1_GOSAR)
Sequence	ATGGCTCTAGTTCCCAGCCACCAGTTCTACCCCAGAACCACAAGGCTATCATTCTTCAGG TACAGTTCATCCAAACCTTTCAAGAAACCAAATTTTCATGCCCCACATGATATTGTCAAT CAAGATTGTATTTTTAAGCAAAACCCATCAAAAAGATCAAATTTTGTGGTTACCCCACAT GATGTTGTCAATAAAGATTGTATTTTTAAGAGAACCCCATTAAAAAGATCAAATTTTGTG GTGAAAAACAGCAGTAGAAGATGGAATTTGGATACAATATCACCCAATTTGAAGTCCAGA GATAGTGGTACTAGTGTATTTAGTAGTTCTTGGTTAGGTAAATGGAATGAAACCCGTAAT GATATTAAGCTGAAAAAGGCCCAAATTGTGTTGAATTATAGGAATAGTAATGGGGATACA TCTGGTTCTGACTGTGAAGAAAGTATTAGCGGTAGTACAATGGATAGAATTGTTGAGAAA TTGAAGAAATTTGGGTATGCTGATGAGGCTACAGAGAAGGAGAAGAGAGAAAAGAGAGTT GTTGAGAAAGGGTCTATTGAGGATATTTTTTTTGTTGAAGAAGGAATATTGCCAAATGTA AGAGGTGGGTTTTCTGAAGAAACTCCATTTGGGGATGAGAATATAATTGCCAAAGATGGT GTGGTTGGATTTCCATGGGAAAAGCCATTGGTGAAGAAAGAGGAGAGTAATTCAATGGCT AGTAGGAGTAGGACTCATTTGGCTGAGCTGACACTTCCTGCTTCTGAGCTTAGAAGGTTG ACGAATTTGGCTCTTAGGATAAAGAACAAGTCGAGAATTACCGGTGCTGGTGTTACACAA CAAGTTGTAGAAACCATTCGCGAGAAGTGGAAAACATCTGAGGTTGTCAGGTTGAAAGTT GAAGGTGCTCCTGCACTAAATATGAAGAGAATGCATGAGATTCTAGAGAGGAAAACTGGT GGACTGGTGATTTGGAGATCTGGCACTTCTGTGGCTCTTTACAGAGGTGTCAGTTACGAG ACTCCATCTGAGCGAATGAAGAAGAGGATAATGAGAAGAGATGAGATTCGTCAGAAGAAC TCTCCAATAGTTGATGGCGAAAGTAATCAGAATTCTCGCAATGATGTGGATTCCCTCCGA GAAGACTCTGTAGATACTTCTGAAGAGAACAAAAGTATTGATAGACAATCAGAAGTGAAC TATGAAGATGAAGTAGACAAACTGTTAGATGGCTTGGGGCCTAGGTATACAGATTGGCCA GGATCCGGACCACTTCCTGTAGATGCAGATTTACTTCCAGGTATAGTCCCTGGATATCAA CCTCCTTTCAGAATTCTTCCATATGGGGTGAGATCTACTCTTGCGGCAAGAGAAGCAACT GCTTTAAGAAGGCTTGCCAGAGTTCTACCTCCACATTTTGCTTTAGGTAGAAGCAGGCAG CATCAAGGTTTGGCCTCAGTCATGGTTAAGCTGTGGCAACGAAGTTCAATTGCAAAGATT GCTATAAAACGTGGCGTTCAGCTTACAACAAGTGAGAGAATGGCTGAGGATATAAAGAAA TTAACAGGGGGTATGCTACTATCTAGAAACAAGGACTTCTTGGTATTCTATAGAGGGAAA GATTTTTTATCACCAGAGGTTGCAGAAGCCTTGTTAGAGAAGGAGAGATTGGCAAAGACC TTGCAAGATGAAGAAGAGAAAGCTAGGCTACGAGCATCACTCAACCTCACAGCAGGTGTT ACAACAATTAATTCTTCAAGGACTGCTGGCACACTAGGAGAAACTTTGGATGCTGATGCT AGATGGGGGAAAAGGCTGGATGATAAGCACAAGGAGAATGTGATGCGAGAAGCAGAACTA TTAAGGCATGGTGACCTGGTCAGGAAGCTTGAAAAGAAGCTTGCATTTGCTGAAAAAAAG TTGATGAAAGCTGAGCGTGTCTTGTCAAAGGTGGAGGAAACTTTAAATCCTTTGGATAGG CATGCAGAGCCTGATAGCTTAACAGATGAGGAGAGATTTATGTTTCGGAAGCTTGGGCTA AGGATGAAAGCTTTCTTACTTTTAGGTAGACGTGGAATTTTTGATGGTACGGTGGAGAAT ATGCACTTGCATTGGAAGTACCGTGAATTGGTTAAAATCATGGTGAAGGCCAAGAATTTC GAACAAGTATCAAAAATTGCTCTAGCCCTTGAAGCAGAGAGTGGAGGCATCTTGGTTTCA GTGGACAAAGTGTCCAAAGGATATGCTATAATTGTATTCCGTGGTAAGGACTACAGTCGA CCACCTACTCTTAGGCCCAAAAATCTTTTAACCAAAAGAAAGGCACTGGCACGTTCAATA GAGCTTCAGAGACGCGAGGCTCTTCTGGAACATATTTCGGCAGTTCAAACAAGAGTTGGA CAGCTTACAGCTGAAATTGAACAACTAGCTAGTCTGAAAGACTCTGCGGATGATGAACTA TATGATAAGCTAAATTCTGCTTATTCTTCTGAAGACGAGGATAGTGAGGAGGAAGGGGAT GATGCATTCATAGAGGTTTTTGACAATGATAACGATGTTGTCCATCGTAGTGATGATTCC GATGATATTCCACATCCAGAAAGAGAGTTCCAGTATATTCATCAAAATGAATCAGAAAGA GAGCTTGTTTGA

Peptide Sequence

PEP ID	Solyc09g083350.3.1
PEP Infomation	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A0B0N0F1_GOSAR)
Sequence	MALVPSHQFYPRTTRLSFFRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPSKRSNFVVTPH DVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNETRN DIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMDRIVEKLKKFGYADEATEKEKREKRV VEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKDGVVGFPWEKPLVKKEESNSMA SRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVVRLKV EGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEIRQKN SPIVDGESNQNSRNDVDSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDGLGPRYTDWP GSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSRQ HQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGK DFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLTAGVTTINSSRTAGTLGETLDADA RWGKRLDDKHKENVMREAELLRHGDLVRKLEKKLAFAEKKLMKAERVLSKVEETLNPLDR HAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVKAKNF EQVSKIALALEAESGGILVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLTKRKALARSI ELQRREALLEHISAVQTRVGQLTAEIEQLASLKDSADDELYDKLNSAYSSEDEDSEEEGD DAFIEVFDNDNDVVHRSDDSDDIPHPEREFQYIHQNESERELV*

Transcript Sequence

Transcript ID	Solyc09g083350.3.1
Transcript Infomation	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A0B0N0F1_GOSAR)
Sequence	TTATCACAATCAGTCACTGAGATGATATTTTGAAGGAGAGAACAAACCCCACCCAAAACC CTCACTCTCTTTTGCTATATTCACTTCTATTTTCTCTGTTTTTCAGTTCTTTTCCTTCCA TTTTGTTATATATATACATGTTCATTTTGGTGTATCTATATATGAGTATATGCATATAAT TTGAGCATGGCTCTAGTTCCCAGCCACCAGTTCTACCCCAGAACCACAAGGCTATCATTC TTCAGGTACAGTTCATCCAAACCTTTCAAGAAACCAAATTTTCATGCCCCACATGATATT GTCAATCAAGATTGTATTTTTAAGCAAAACCCATCAAAAAGATCAAATTTTGTGGTTACC CCACATGATGTTGTCAATAAAGATTGTATTTTTAAGAGAACCCCATTAAAAAGATCAAAT TTTGTGGTGAAAAACAGCAGTAGAAGATGGAATTTGGATACAATATCACCCAATTTGAAG TCCAGAGATAGTGGTACTAGTGTATTTAGTAGTTCTTGGTTAGGTAAATGGAATGAAACC CGTAATGATATTAAGCTGAAAAAGGCCCAAATTGTGTTGAATTATAGGAATAGTAATGGG GATACATCTGGTTCTGACTGTGAAGAAAGTATTAGCGGTAGTACAATGGATAGAATTGTT GAGAAATTGAAGAAATTTGGGTATGCTGATGAGGCTACAGAGAAGGAGAAGAGAGAAAAG AGAGTTGTTGAGAAAGGGTCTATTGAGGATATTTTTTTTGTTGAAGAAGGAATATTGCCA AATGTAAGAGGTGGGTTTTCTGAAGAAACTCCATTTGGGGATGAGAATATAATTGCCAAA GATGGTGTGGTTGGATTTCCATGGGAAAAGCCATTGGTGAAGAAAGAGGAGAGTAATTCA ATGGCTAGTAGGAGTAGGACTCATTTGGCTGAGCTGACACTTCCTGCTTCTGAGCTTAGA AGGTTGACGAATTTGGCTCTTAGGATAAAGAACAAGTCGAGAATTACCGGTGCTGGTGTT ACACAACAAGTTGTAGAAACCATTCGCGAGAAGTGGAAAACATCTGAGGTTGTCAGGTTG AAAGTTGAAGGTGCTCCTGCACTAAATATGAAGAGAATGCATGAGATTCTAGAGAGGAAA ACTGGTGGACTGGTGATTTGGAGATCTGGCACTTCTGTGGCTCTTTACAGAGGTGTCAGT TACGAGACTCCATCTGAGCGAATGAAGAAGAGGATAATGAGAAGAGATGAGATTCGTCAG AAGAACTCTCCAATAGTTGATGGCGAAAGTAATCAGAATTCTCGCAATGATGTGGATTCC CTCCGAGAAGACTCTGTAGATACTTCTGAAGAGAACAAAAGTATTGATAGACAATCAGAA GTGAACTATGAAGATGAAGTAGACAAACTGTTAGATGGCTTGGGGCCTAGGTATACAGAT TGGCCAGGATCCGGACCACTTCCTGTAGATGCAGATTTACTTCCAGGTATAGTCCCTGGA TATCAACCTCCTTTCAGAATTCTTCCATATGGGGTGAGATCTACTCTTGCGGCAAGAGAA GCAACTGCTTTAAGAAGGCTTGCCAGAGTTCTACCTCCACATTTTGCTTTAGGTAGAAGC AGGCAGCATCAAGGTTTGGCCTCAGTCATGGTTAAGCTGTGGCAACGAAGTTCAATTGCA AAGATTGCTATAAAACGTGGCGTTCAGCTTACAACAAGTGAGAGAATGGCTGAGGATATA AAGAAATTAACAGGGGGTATGCTACTATCTAGAAACAAGGACTTCTTGGTATTCTATAGA GGGAAAGATTTTTTATCACCAGAGGTTGCAGAAGCCTTGTTAGAGAAGGAGAGATTGGCA AAGACCTTGCAAGATGAAGAAGAGAAAGCTAGGCTACGAGCATCACTCAACCTCACAGCA GGTGTTACAACAATTAATTCTTCAAGGACTGCTGGCACACTAGGAGAAACTTTGGATGCT GATGCTAGATGGGGGAAAAGGCTGGATGATAAGCACAAGGAGAATGTGATGCGAGAAGCA GAACTATTAAGGCATGGTGACCTGGTCAGGAAGCTTGAAAAGAAGCTTGCATTTGCTGAA AAAAAGTTGATGAAAGCTGAGCGTGTCTTGTCAAAGGTGGAGGAAACTTTAAATCCTTTG GATAGGCATGCAGAGCCTGATAGCTTAACAGATGAGGAGAGATTTATGTTTCGGAAGCTT GGGCTAAGGATGAAAGCTTTCTTACTTTTAGGTAGACGTGGAATTTTTGATGGTACGGTG GAGAATATGCACTTGCATTGGAAGTACCGTGAATTGGTTAAAATCATGGTGAAGGCCAAG AATTTCGAACAAGTATCAAAAATTGCTCTAGCCCTTGAAGCAGAGAGTGGAGGCATCTTG GTTTCAGTGGACAAAGTGTCCAAAGGATATGCTATAATTGTATTCCGTGGTAAGGACTAC AGTCGACCACCTACTCTTAGGCCCAAAAATCTTTTAACCAAAAGAAAGGCACTGGCACGT TCAATAGAGCTTCAGAGACGCGAGGCTCTTCTGGAACATATTTCGGCAGTTCAAACAAGA GTTGGACAGCTTACAGCTGAAATTGAACAACTAGCTAGTCTGAAAGACTCTGCGGATGAT GAACTATATGATAAGCTAAATTCTGCTTATTCTTCTGAAGACGAGGATAGTGAGGAGGAA GGGGATGATGCATTCATAGAGGTTTTTGACAATGATAACGATGTTGTCCATCGTAGTGAT GATTCCGATGATATTCCACATCCAGAAAGAGAGTTCCAGTATATTCATCAAAATGAATCA GAAAGAGAGCTTGTTTGAGTAAAACACTGTTCTTGACACTCCCTTAAGGCATGTTGTGGC TTGTTTGTACAATCGAGGAAGTTGAAGAAGCTAGGATGCAGAACTGGGCTACGGAAGAAG CAGAACAACAACAAAACAAAAAAAAACTGAACTTAAAGAATTTGATTACTGTGCAGGTTC CATGTAATGCCCTCTGGGCTCTGGTCTTGCTGATCTTCGATATTTTACATGATATGCTGT TATTTTAAAGCTTTTAGCTCCAAAAGAAAAGGAGATCCTACTGACAAAGCTTTCATTGAG CTTCTCTGTACATATTTGTCAAGGAAAATACTAGCACATATAACAAACTTCCAAGAATTC GTAGATGAGCAATATTTGGTTCATGACTGAACACCAATTGTGACAGATAGTATATATTTA TTATAATTAG