Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g082980.3.1
CDS Infomation

DUF506 family protein (AHRD V3.3 *** A0A072VMZ8_MEDTR)
Sequence

ATGCCTCCGACGAAAATTCAGCCGATCGATTCTCTGTTAGACAGAGAATCGATCCAAAGC
GACACCACTAAGCCTGTGCTGAAATCGCGAATCAAAAGGTTTTTTGACCGGCCGTTCCCC
AGCGTCTTACGGATTTCGTCGGGGACAGAGAAGCCGAATGCTGCCGGCGCCAGTAATGAA
TTGGCAAATGGAAAAGATGGAGCAGTTCCTGAATTCGAGCCTAGCTCTCTTTGTTTGGCT
AAGATGGTTCAGAATTTCATTGAGGAGAACAATGAAAAGCCTTCACCTGCTAAATGTGGC
CGGAATCGTTGCAATTGCTTCAACGGAACCAACAATGATAGCTCCGATGACGAGTTTGAT
TTTGCTGATTCAGCACACTCCTCCTTCAACGATTCTTCTGATGCTCTCAAGAGCTTAATT
CCGTGTGCAACTGTTGTCGAGAGAAATCTATTAGCTGATATCTCACAAATCGTTGAGAAA
AACAAAGCTTGCAAGAGTAAGAATGATTTGAGAAAAATCGTCACCGATGAACTCTTGAAA
CTTGGCTACAATGCATCCATTTGCAAATCCAAATGGGAAAAGGCTCCTTCTGTTCCTGCA
GGTGAATATGAGTACATTGATGTGATTGAGAAAGGAGAAAGAGTGTTAATTGATGTAGAT
TTCCGATCGGAGTTTGAAGTTGCCCGATCAACTAGCAGTTACAAGGCGGTTCTTCAATTG
CTACCTTTCATCTTCGTCGGAAATTCCGACCGCCTTCTGCAAATCGTGTCCATTGCCTCA
GAAGCCGCTCGACAGAGTTTGAAGAAGAAAGGCATGCACATCGCTCCATGGCGTAAAGCT
GAGTATATAAAAGCGAAATGGCTTAGCCCACACATCCGAACCGGAGAAGCCACAGTGAAG
AGTGAGGTCAAGGAGAAGAAGCTTGTTGAAGAAGTTGAGAGTAAACAACTATCTGATTCT
GAATTTGGAGAATTAGAGCTGATTTTTGGTGGGCAATCGTCTTACGATTCCAATTCGTTT
ACGTTGCTTTCATCATCATCACCGCCGCCGGTGAAATTTTCCGGCAGCGAGGAAGAGAAG
CCGGTACAGCCGGTAATGATGACATGGGAACCTCCCGCATTGAAGCCCAAAAATTGTGAG
AGAGGAAACAAAGTCATCGTCCCCGGGTTGGCTTCCCTTCTCAGGGAAAAGCCCTAA

Peptide Sequence

PEP ID

Solyc09g082980.3.1
PEP Infomation

DUF506 family protein (AHRD V3.3 *** A0A072VMZ8_MEDTR)
Sequence

MPPTKIQPIDSLLDRESIQSDTTKPVLKSRIKRFFDRPFPSVLRISSGTEKPNAAGASNE
LANGKDGAVPEFEPSSLCLAKMVQNFIEENNEKPSPAKCGRNRCNCFNGTNNDSSDDEFD
FADSAHSSFNDSSDALKSLIPCATVVERNLLADISQIVEKNKACKSKNDLRKIVTDELLK
LGYNASICKSKWEKAPSVPAGEYEYIDVIEKGERVLIDVDFRSEFEVARSTSSYKAVLQL
LPFIFVGNSDRLLQIVSIASEAARQSLKKKGMHIAPWRKAEYIKAKWLSPHIRTGEATVK
SEVKEKKLVEEVESKQLSDSEFGELELIFGGQSSYDSNSFTLLSSSSPPPVKFSGSEEEK
PVQPVMMTWEPPALKPKNCERGNKVIVPGLASLLREKP*

Transcript Sequence

Transcript ID

Solyc09g082980.3.1
Transcript Infomation

DUF506 family protein (AHRD V3.3 *** A0A072VMZ8_MEDTR)
Sequence

TATATTTTCTCATTTTAATTAACTTAAACATCATAAAAAGAAAAGAGAGAGAAAATAAAA
AGTCATTCATATTTTTTCTTTCCCTCTTGCCGGAGATAACGACAACCTCGTCGGAAAATG
AATATTCCGGCGACTTGTTCCTTTCTTCGCAAATGTAATGCTTGTGTTTCAGTTCATTAC
CGTCACGTTTTCCATGAAAAGTCTTCACCAAAAGCACACACATTCCTTTCTTTTCCTCAT
TTCTGAACAGAGTTAAGGTATCCAAAGTTCGATCAGTTTTATTTTTTCTTTCTTTTTGAA
TAAAACTTGAACTCTTTGATTGATTCGGTGAGATGTATCTGTGATGATGTGCAACTGCTT
TTGATAAAGGAAGAGGAGTTATACTTTTTGAGAATAGATTTAGGTGAATTTTGATATTAA
TTTTCTGGAATCTGTGAGTTTTTTTTCGGTGATTTTTCTGCAAAGTTTTCTGTGAGGATT
TAGGGCTGGTTTTAGATGCAGAATTCTGATTTTTTTGACATCAGCGAGTAGGTGTTTAAA
GCTCTCAAAATTGAGCAAAACTGACAGAGGGAGTATAATTAGGCTTAGAGAGAGAGAGAG
AGAGAGTTTGTGTCTGTATCTGTGTCTGTGTGCACCGTTTTGATTGTGATAGAGGATGCC
TCCGACGAAAATTCAGCCGATCGATTCTCTGTTAGACAGAGAATCGATCCAAAGCGACAC
CACTAAGCCTGTGCTGAAATCGCGAATCAAAAGGTTTTTTGACCGGCCGTTCCCCAGCGT
CTTACGGATTTCGTCGGGGACAGAGAAGCCGAATGCTGCCGGCGCCAGTAATGAATTGGC
AAATGGAAAAGATGGAGCAGTTCCTGAATTCGAGCCTAGCTCTCTTTGTTTGGCTAAGAT
GGTTCAGAATTTCATTGAGGAGAACAATGAAAAGCCTTCACCTGCTAAATGTGGCCGGAA
TCGTTGCAATTGCTTCAACGGAACCAACAATGATAGCTCCGATGACGAGTTTGATTTTGC
TGATTCAGCACACTCCTCCTTCAACGATTCTTCTGATGCTCTCAAGAGCTTAATTCCGTG
TGCAACTGTTGTCGAGAGAAATCTATTAGCTGATATCTCACAAATCGTTGAGAAAAACAA
AGCTTGCAAGAGTAAGAATGATTTGAGAAAAATCGTCACCGATGAACTCTTGAAACTTGG
CTACAATGCATCCATTTGCAAATCCAAATGGGAAAAGGCTCCTTCTGTTCCTGCAGGTGA
ATATGAGTACATTGATGTGATTGAGAAAGGAGAAAGAGTGTTAATTGATGTAGATTTCCG
ATCGGAGTTTGAAGTTGCCCGATCAACTAGCAGTTACAAGGCGGTTCTTCAATTGCTACC
TTTCATCTTCGTCGGAAATTCCGACCGCCTTCTGCAAATCGTGTCCATTGCCTCAGAAGC
CGCTCGACAGAGTTTGAAGAAGAAAGGCATGCACATCGCTCCATGGCGTAAAGCTGAGTA
TATAAAAGCGAAATGGCTTAGCCCACACATCCGAACCGGAGAAGCCACAGTGAAGAGTGA
GGTCAAGGAGAAGAAGCTTGTTGAAGAAGTTGAGAGTAAACAACTATCTGATTCTGAATT
TGGAGAATTAGAGCTGATTTTTGGTGGGCAATCGTCTTACGATTCCAATTCGTTTACGTT
GCTTTCATCATCATCACCGCCGCCGGTGAAATTTTCCGGCAGCGAGGAAGAGAAGCCGGT
ACAGCCGGTAATGATGACATGGGAACCTCCCGCATTGAAGCCCAAAAATTGTGAGAGAGG
AAACAAAGTCATCGTCCCCGGGTTGGCTTCCCTTCTCAGGGAAAAGCCCTAAAAAATTTT
GTTTCCTTTTTCTAACTTGATAAGAAAGAAATCTAGTACTAGTAGTAAAAAAATATATAA
AACAAAATATAGAGAAGGATAATCGGAGTTTCAGATATAGATCGGAAACCCTTTTTTTTT
CCGTTCTCCGTTCGCAAGGATCTGTAATAAGAAAATCTAGAACCATCCTTTGCTGTAATA
ATTTTCCAAAATGCCAAAAAAAAGAGAAACAAATTATCATTACAGTCT