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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g082180.3.1
CDS Infomation

C-8 sterol isomerase (AHRD V3.3 *** AT1G05440.1)
Sequence

ATGAAATCAACACCAGTTTCAACGCCGAATTCCTCCGTGAAATCATCGTCGACCACCTCC
GTCATGGATTCCGAGATGAAAGACAGCTACTATTTCCCGGGATGTCGAAAAGATACCAAT
TGCAATTGCGAAATCTGCATAGCCAGTTTCAATGCAACTCTCGATCTGATGACTAACAGC
ATGCACAAGAGTTCAATCACAAAACTTTCAGCGGCTAGAGCTCTTCAATTTCCAAGAAGC
CCCATTTCTTACACCCCATCGAGGACTTTTTCGACCCCCAAATCGAGTAGCAACAGTTAT
GCTTCTTCGTCCATGTCCCCTCCGCTCAATTCCACTGCTAGAGGAAGCTTTCATGAGAAG
GTGAAGAAGAGGAAGAGGGGATTCGGTTTTGGGGTTCTATTCATGCGGTTGATTTTTGGA
TTGGGCGTTGTTTTAGGGTTGGAATTTGGGCTTTCTTCGTTGGTTTCTGGGTTCTTGCAG
CCTCAATTGTCGCAACAAATGGTTAAGAATTTGAGTGAAAAATCATGGGGTTTGAAGGAT
TTTGATGAAAGATTGATGTTCTTTAAGAAGGAGCTTGAAGGTCTAATTGATGACGATGAA
ATATCGAGTTGCAGCCCTCTTAATTCTACTTGGAAAATCAACCAGGATAGTTTGCTTCTG
AATTCACGATGTACATTGTACAAGTCCAGTTCAGAAGAGTTGAGTATATGGGGATGGCCT
TTACAAACAGCTGGTTTGCTCACAGCTGGATTTTCTGCTCGTTCGTATACCATATTATCA
GGAAGACTCACTGAGTGGTCCAATGGTGAGATTGGTTACTCGATTAGAAAGTCGAATAGT
TCGTGGACTCAACAAAAATGGAGTGGTTCAGCTGTGCAAATGGACCCAAATACATGGATT
TTAGAGTACAGTCAAAGTCCTTTAACTGAAAATGGAAAATTGGTTTCAGCTGTGTTGGAG
TTTTTGAAGTTCAGACTGAGAAGAGAAGTTCAAAAGTTGAAACAAGAGTTCTGGCTGTCA
TCTTCTTTCGTGGGCCAGCAGAGTGATTTCACAATAGAGAGGCTCCAGGTTCCAACCTAA

Peptide Sequence

PEP ID

Solyc09g082180.3.1
PEP Infomation

C-8 sterol isomerase (AHRD V3.3 *** AT1G05440.1)
Sequence

MKSTPVSTPNSSVKSSSTTSVMDSEMKDSYYFPGCRKDTNCNCEICIASFNATLDLMTNS
MHKSSITKLSAARALQFPRSPISYTPSRTFSTPKSSSNSYASSSMSPPLNSTARGSFHEK
VKKRKRGFGFGVLFMRLIFGLGVVLGLEFGLSSLVSGFLQPQLSQQMVKNLSEKSWGLKD
FDERLMFFKKELEGLIDDDEISSCSPLNSTWKINQDSLLLNSRCTLYKSSSEELSIWGWP
LQTAGLLTAGFSARSYTILSGRLTEWSNGEIGYSIRKSNSSWTQQKWSGSAVQMDPNTWI
LEYSQSPLTENGKLVSAVLEFLKFRLRREVQKLKQEFWLSSSFVGQQSDFTIERLQVPT*

Transcript Sequence

Transcript ID

Solyc09g082180.3.1
Transcript Infomation

C-8 sterol isomerase (AHRD V3.3 *** AT1G05440.1)
Sequence

AAACCCCATTTATCTTCTTCCCTTAAACAACAAAGAAACCCCAGATTTTGGGTATTTCCA
TAGCTCAAAATACCATGAAATCAACACCAGTTTCAACGCCGAATTCCTCCGTGAAATCAT
CGTCGACCACCTCCGTCATGGATTCCGAGATGAAAGACAGCTACTATTTCCCGGGATGTC
GAAAAGATACCAATTGCAATTGCGAAATCTGCATAGCCAGTTTCAATGCAACTCTCGATC
TGATGACTAACAGCATGCACAAGAGTTCAATCACAAAACTTTCAGCGGCTAGAGCTCTTC
AATTTCCAAGAAGCCCCATTTCTTACACCCCATCGAGGACTTTTTCGACCCCCAAATCGA
GTAGCAACAGTTATGCTTCTTCGTCCATGTCCCCTCCGCTCAATTCCACTGCTAGAGGAA
GCTTTCATGAGAAGGTGAAGAAGAGGAAGAGGGGATTCGGTTTTGGGGTTCTATTCATGC
GGTTGATTTTTGGATTGGGCGTTGTTTTAGGGTTGGAATTTGGGCTTTCTTCGTTGGTTT
CTGGGTTCTTGCAGCCTCAATTGTCGCAACAAATGGTTAAGAATTTGAGTGAAAAATCAT
GGGGTTTGAAGGATTTTGATGAAAGATTGATGTTCTTTAAGAAGGAGCTTGAAGGTCTAA
TTGATGACGATGAAATATCGAGTTGCAGCCCTCTTAATTCTACTTGGAAAATCAACCAGG
ATAGTTTGCTTCTGAATTCACGATGTACATTGTACAAGTCCAGTTCAGAAGAGTTGAGTA
TATGGGGATGGCCTTTACAAACAGCTGGTTTGCTCACAGCTGGATTTTCTGCTCGTTCGT
ATACCATATTATCAGGAAGACTCACTGAGTGGTCCAATGGTGAGATTGGTTACTCGATTA
GAAAGTCGAATAGTTCGTGGACTCAACAAAAATGGAGTGGTTCAGCTGTGCAAATGGACC
CAAATACATGGATTTTAGAGTACAGTCAAAGTCCTTTAACTGAAAATGGAAAATTGGTTT
CAGCTGTGTTGGAGTTTTTGAAGTTCAGACTGAGAAGAGAAGTTCAAAAGTTGAAACAAG
AGTTCTGGCTGTCATCTTCTTTCGTGGGCCAGCAGAGTGATTTCACAATAGAGAGGCTCC
AGGTTCCAACCTAAATAGAATTTATGAGATAAAGCATTCTCATCCCTCATGAGAGCTCGC
GGTGTAAGCTCTATATGTTTGTTCTTCTGTGAACGTTGAGAATTCAACATTAGCATCTTT
TTGTACTACGTTGTTCTATGTTTCAACTGTAAATACTATATCCCCTGTAGCCAGAACTGT
TCTGCCTGCACTTATTCAATGAAATTGAATGTTAAAGAGAAACGAGGTCAAAATGATACA
ATGTATTCTATTTCACAAATTGCTGTTACCAATAGTCTTTACAAGAACAAGAACCGTCTC
TGTAATGGTGAAATCTAGTTCTATCTCTTACAACAATTTCTCTCTCAAACACCTTAGATG
CCAACTTCATAAAGTTGTGGCAATCCTCACAGATCCTTAAGTTCTTAATTATATGGATAG
GTGATCCCCTACTACTTTTCAGTAATCCGTAACAAAGAGCCAGCTTTTCGCTGTGCAAAA
GAACTATATCCTTCTTCTCGTCTTCATCAACATCAATTAAAACAATACTAGTGTTTGGAG
CATAACCGACCTGCATCAACTTGCAAACTACCTCATCTAGCTTTGCATAGATGTCATCAG
CATGTTTATGACTCTTATCAGCTGTTAAAAATTTGTGTATCTCATTGCCCATTTCAATCT
TACTGTGACCCCGTTCCTTCAATATGCCTTTGTGTTTCATAAGTTGTCTCACCTCCCCAA
CATTTTCCCATCGTTTTCCTTTAGCATAAAAGTTTGATAAGAAGACATAAGCTCCATCAT
GTTCAGGATCTAACTCGAGGAGCCTTTTAGCAGCAAATTCTCCTAGTTCATACTCACCAT
GGATCCGACAAGCAGCCATTAGTGAACCCCAAATGACAACATTTGGTGCCATAGGCATAC
TCTCTACCAGCTCCAGGGCTTCTCTGAGACGATTTGCTCGGCCATAAAGGTCCACCATGC
AACCATAGTGTTCAAGTTTAGGTGTGATTTTGTACTCATTCACCATTGATGAGAAGATCT
GTTGTCCCTCATCAACTAGTCCGGCATGACTACAAGCATATAGGACAGCCACAAACGTAA
TCCAATTGGGCTCTTTCATTTGACGAAAAAGCATCAAGGCCTGATCAGCCTCACCATGAA
TGGCATGTGCACTAGTCATACTAGTCCACGAAATAACATTTTTCCTTCGCATTCGACCAA
AAACTTCTCTTGCTCCGTCTAGATACCCACATTTGGCATACATATCAATTAGGGCATTAT
TTACAGGCAAAGCTTCTCGAAATCTGTACTTATCAACAATCATATGGATTCTTTTTGCTT
GATCCAATGCGCCGAGATTAGCACAGGCTGAGATAACACTTAACATAGTTACTTGGTCAG
GCTTCACTCCAGATGCCTGCATTTCATCAAGTAACTTAAGACCCTCTTGTGGTTGGTCAC
TCTCTGCATAGCCAGATATCATCGCACTCCAACAAACCAAGTCCTTATCTGTTATTTGAT
TAAAAATAGAGTGTGCAGCTTCGACTTGCCCAGCCTTTGAGTACCCTGAAATCATGGCAG
TTGATACCACCAAATTCTTTTGTGACAGTTCGTCATACAAATTCTGAGCCAAATCCATGC
AGCCACAACCTGCATACATGCTGATAAGAGAACTTTGCAGACGAGAATCAGCAATGATAT
TATTCTCTGATATCAACTCATGAATCACTTTCCCAAGAGCTAAGTTTCCAGTTTGACCAC
AAGCAGATAGAATGGTTGTGAAAACTCTCGAGTCGGGTTCC