Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g075850.3.1
CDS Infomation

Vacuole membrane 1 (AHRD V3.3 *** A0A0B0NWV3_GOSAR)
Sequence

ATGGGGTCGAAGAAGAAAACAGCATCACAGAAAAATTCTCGTTCTGCTTCTCCAGTTAAA
GAGATGGCAATTTCAGATCTTACTGCGAAGCATCAAAAGGATTTAGAAAATTTGAATCTG
TTGACACAGCCTTTCAGAACACTCAAGCTTTTCAGTATGGCAATGATGCAGTATCTTATG
AGGTCGATAGCATATCTTTTGTCGCACCGATGGTGTATGCTTTTCAGTATGATTGCTGGA
CTTGCCTTAATACTGCTTGTGACAACCGATGGTCCTCATGTAAAGCATGTTGAGGAGGTT
GGTAGATATCTCCAGTTTGGATTATGGTGGGTGGCTCTTGGTGTGGCGTCTTCTATTGGC
CTTGGGTCTGGTTTGCACACTTTTGTCCTTTATCTGGGCCCTCACATTGCTTTATTTACG
ATAAAGGCAATGAAGTGTGGGCGAGTTGACCTCAAAATGGCTCCCTATGATACAATACAA
TTTCAAAAAACTCCTTTATGGCTTCACAAAGATTGTTCAGAGTTTGGCCCCCCTGTATTT
TCATCTTCACATGGCACAAGTGTTCCTCTTAGTAGCATACTGCTCCAAGTGCAGTTAGAG
GCTGTTTTATGGGGCCTTGGAACCGCACTTGGAGAGCTTCCCCCATATTTTATTTCAAGA
GCAGCAAGCCTCTCAGGCAGTAAAGTAGAAGCAATGGAAGAACTAGATGCCTCTTCTGAA
AACAATGGATTTATAGCTACTCGTCTGACTCAAATGAAGCGCTGGTTTTTTTCCCATGCA
CAATGTTTGAACTTCTTCACAATTCTAATACTTGCTTCGGTTCCTAATCCTCTATTTGAT
CTTGCTGGCATAATGTGTGGACAATTTGGGATCCCATTTTGGAAGTTCTTTTTTGCAACT
TTGATTGGAAAGGCCATCATTAAAACTCACATACAGACCGTGTTCATAATTTCTGTTTGC
AACAATCAACTTCTTTATTGGGTGGAAACCAAGATGATTCGGATGCTTAGTTTTATACCT
GGTCTTGAAACCATGTTACCTAAAATCATTGCCAAGCTCCATTCCATGAAAGACAAGTAT
ATGGCTACCAAAACTCCGTCCACTTCAAATATAAAGGTGAACAAATGGGATTTCTCATTT
GCTTCAGTTTGGAACGGCGTGGTAACCATCATGCTACTTAACTTTTTCGTTAAGATTGTA
AATGCTACTGCACAGCGGTATTTAAAAAAACAGCAAGAAGAGGAGTTGGCTAGTCTGAAG
AACAAATCATCTTGA

Peptide Sequence

PEP ID

Solyc09g075850.3.1
PEP Infomation

Vacuole membrane 1 (AHRD V3.3 *** A0A0B0NWV3_GOSAR)
Sequence

MGSKKKTASQKNSRSASPVKEMAISDLTAKHQKDLENLNLLTQPFRTLKLFSMAMMQYLM
RSIAYLLSHRWCMLFSMIAGLALILLVTTDGPHVKHVEEVGRYLQFGLWWVALGVASSIG
LGSGLHTFVLYLGPHIALFTIKAMKCGRVDLKMAPYDTIQFQKTPLWLHKDCSEFGPPVF
SSSHGTSVPLSSILLQVQLEAVLWGLGTALGELPPYFISRAASLSGSKVEAMEELDASSE
NNGFIATRLTQMKRWFFSHAQCLNFFTILILASVPNPLFDLAGIMCGQFGIPFWKFFFAT
LIGKAIIKTHIQTVFIISVCNNQLLYWVETKMIRMLSFIPGLETMLPKIIAKLHSMKDKY
MATKTPSTSNIKVNKWDFSFASVWNGVVTIMLLNFFVKIVNATAQRYLKKQQEEELASLK
NKSS*

Transcript Sequence

Transcript ID

Solyc09g075850.3.1
Transcript Infomation

Vacuole membrane 1 (AHRD V3.3 *** A0A0B0NWV3_GOSAR)
Sequence

TATAATAGTAGTTTTTGTTTAACCCAGATGATCTGGGTCGCCCCCATTGTTTGAAAAAAA
CGACCCCCTGAGAGAGCTCAAACAGTGGATCTGACGCAAACCCACTTAGATTTTCTTGTT
TACAGCCCTCAGATCTCTTCAAAAAATCGATTCTTTCTGTAATCGAATTGATTGATTTTC
TTCTTTTTTCGAAAGATTTCTTTGCAATCCAACAGTAATTGGGTTGTAAAAAAGGAATCT
TTTTAAGGTGGAAGGCACAATTAGCAATGGGGTCGAAGAAGAAAACAGCATCACAGAAAA
ATTCTCGTTCTGCTTCTCCAGTTAAAGAGATGGCAATTTCAGATCTTACTGCGAAGCATC
AAAAGGATTTAGAAAATTTGAATCTGTTGACACAGCCTTTCAGAACACTCAAGCTTTTCA
GTATGGCAATGATGCAGTATCTTATGAGGTCGATAGCATATCTTTTGTCGCACCGATGGT
GTATGCTTTTCAGTATGATTGCTGGACTTGCCTTAATACTGCTTGTGACAACCGATGGTC
CTCATGTAAAGCATGTTGAGGAGGTTGGTAGATATCTCCAGTTTGGATTATGGTGGGTGG
CTCTTGGTGTGGCGTCTTCTATTGGCCTTGGGTCTGGTTTGCACACTTTTGTCCTTTATC
TGGGCCCTCACATTGCTTTATTTACGATAAAGGCAATGAAGTGTGGGCGAGTTGACCTCA
AAATGGCTCCCTATGATACAATACAATTTCAAAAAACTCCTTTATGGCTTCACAAAGATT
GTTCAGAGTTTGGCCCCCCTGTATTTTCATCTTCACATGGCACAAGTGTTCCTCTTAGTA
GCATACTGCTCCAAGTGCAGTTAGAGGCTGTTTTATGGGGCCTTGGAACCGCACTTGGAG
AGCTTCCCCCATATTTTATTTCAAGAGCAGCAAGCCTCTCAGGCAGTAAAGTAGAAGCAA
TGGAAGAACTAGATGCCTCTTCTGAAAACAATGGATTTATAGCTACTCGTCTGACTCAAA
TGAAGCGCTGGTTTTTTTCCCATGCACAATGTTTGAACTTCTTCACAATTCTAATACTTG
CTTCGGTTCCTAATCCTCTATTTGATCTTGCTGGCATAATGTGTGGACAATTTGGGATCC
CATTTTGGAAGTTCTTTTTTGCAACTTTGATTGGAAAGGCCATCATTAAAACTCACATAC
AGACCGTGTTCATAATTTCTGTTTGCAACAATCAACTTCTTTATTGGGTGGAAACCAAGA
TGATTCGGATGCTTAGTTTTATACCTGGTCTTGAAACCATGTTACCTAAAATCATTGCCA
AGCTCCATTCCATGAAAGACAAGTATATGGCTACCAAAACTCCGTCCACTTCAAATATAA
AGGTGAACAAATGGGATTTCTCATTTGCTTCAGTTTGGAACGGCGTGGTAACCATCATGC
TACTTAACTTTTTCGTTAAGATTGTAAATGCTACTGCACAGCGGTATTTAAAAAAACAGC
AAGAAGAGGAGTTGGCTAGTCTGAAGAACAAATCATCTTGAAGGAAATCAGATAAACCCC
CTCTTCATTCTCATAGATTTGTTTTTCGGTCAAGCTTTTTCTTTTCCGCTATCTATCCTT
GTTAAATCGTCAGAAATAGGGTTTTACGAAGCGATTGGTGGCTACAATGGAAGCTACTTA
GAGACTCGGCACCAGCAAGTCCATTTCACAAACTTTGTACAAAAGAACATTAGTTTCACA
AGTCCATTGACCGTAACTTCAAGAAAAACATTATTTAGGGGTGCCATTGTTGACAAAATT
GGTGATCAGGAAACTGGAAAACTCATTATTGGGCAAATGCTTCAACATTTAGAAAGTGAA
GATACATTTTCTGCATTTATAAACAGGCCTGTTTTTTTTTTTTAGTATAGCATCAGTACT
CTGTTCTTCCCTCTTTTTTCTTTCATTTAAATTCATCGATTCATTTTAAGTGGTGTTTGG
CACAGGCAAGAGCTTGTATTGTACCGTGTGCTGAAATTATTTTTTTTTATGTATCATCGT
CATTGGTGCGTTGGTGTTCTTCTCTCTGATCTCGTCCATTGGCATTCTGATCCTGGTCAT
TCATAGATAGTCGGAACACTTTTATTCTTGATAGTCACAGGTCTGAAATAGGAAAGCTGC
TTCACAGTTTTGTTATGAACGGA