Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g075500.3.1
CDS Infomation

DUF789 family protein (AHRD V3.3 *** A0A072UTC8_MEDTR)
Sequence

ATGTCTGGTTCTGGAAGCTTCGCGGTGTCGCGGAGCCACGGCGCTGACCGATTTTATAAC
CCTCCGGCTATGCGCCGCCAGCAGCAGTTACAGAAACAGCAGCAACAACAGCAACAGCAA
TCGCAGCAGCAGCAGCAGCAGAGGCAGCCGGTGCAGAGAGCAGTTAAAGTTGAGGCGGCT
GTAGTTGCAGCTGAGGTGGGGAACCGGACTGACTCAGACGATTCGACTAATACTACTACA
TTGTCGAAAACGTCCTCTGTATGCTCCGCTTCACCACCAAGGCCTCCTATAAATGTTACC
AATTTGGATCGTTTGATGGAATCTGTTACTCCCTTTGTGCCCGCCCAGCATTTCTCTGAG
GTGAATGTAAGAGGCCGTAGAGCCAGGGAAGCAGAGCCATATATATATTATTGCCTTGGC
GATCTTTGGGAAGCTTTTAGTGAATGGAGCGTCTATGGTGTGGGTGTACCAATATTGTTG
AATGGGAAAGATCCAATCATTCAATATTATGTACCTTTCTTATCCGGCATCCAATTGTAC
GTAGATCCGTCAAAGCCATCTTCACGCATCAGCAGGCCTGGTGAAGAGGGTGATGCTGAG
TCATCAAGGGAGACCAGCAGTGGTGGAAGCAGTGACTGTGAAGTGGAGAGGCGGTCCATA
TCCTCTTCTGATGGGCTGCGGAACCAGCATAGTCTTGTAAATCTAAATGCTCAACGACTA
AATAGACTATCATTGAGTGATAAGGCTGTCATGGTGTCATCGAGTGATGAAACTGAACTT
TCTAAGTCTCTTGGGCAACTCATGTTTGAGTATTTGGAGCATGAGCAACCACATCATCGA
AGACCATTGGCTGACAAGATAGCGTTTTTGGCATCTCAATTTCCAGAGCTGAAGACCTGC
AGGAGCGCTGATTTACTGCCTTCTAGTTGGATTTCTGTAGCTTGGTATCCAATTTATAGA
ATACCCATGGGTCCAACATTACGGGATCTGGATGCTTCTTTTCTAACCTTTCATACTTTG
TCCACACAATCAAGAGCTTTGAGCACAGTTCACCCACGCTATCATGGTGCAACCGGTAGG
AAAGTTCTAGGAAATGTAAATGCATGCTCAAGAATCTCTTTACCAGTCTTTGGTCTTGCT
ACATACAAACTGAAAACCTCAATCTTGAGTCCTGGTGGACCTCATGAATCCGAGCAAGAA
AATTCTTTATTGCAAGCTGCAGACAGTTGGCTTCGGCGCTTGCATGTAATCCTTCCTGAT
TACCAGTTTTTCCGTATGCACTATTCTCCATGGAAATGA

Peptide Sequence

PEP ID

Solyc09g075500.3.1
PEP Infomation

DUF789 family protein (AHRD V3.3 *** A0A072UTC8_MEDTR)
Sequence

MSGSGSFAVSRSHGADRFYNPPAMRRQQQLQKQQQQQQQQSQQQQQQRQPVQRAVKVEAA
VVAAEVGNRTDSDDSTNTTTLSKTSSVCSASPPRPPINVTNLDRLMESVTPFVPAQHFSE
VNVRGRRAREAEPYIYYCLGDLWEAFSEWSVYGVGVPILLNGKDPIIQYYVPFLSGIQLY
VDPSKPSSRISRPGEEGDAESSRETSSGGSSDCEVERRSISSSDGLRNQHSLVNLNAQRL
NRLSLSDKAVMVSSSDETELSKSLGQLMFEYLEHEQPHHRRPLADKIAFLASQFPELKTC
RSADLLPSSWISVAWYPIYRIPMGPTLRDLDASFLTFHTLSTQSRALSTVHPRYHGATGR
KVLGNVNACSRISLPVFGLATYKLKTSILSPGGPHESEQENSLLQAADSWLRRLHVILPD
YQFFRMHYSPWK*

Transcript Sequence

Transcript ID

Solyc09g075500.3.1
Transcript Infomation

DUF789 family protein (AHRD V3.3 *** A0A072UTC8_MEDTR)
Sequence

GATTTTTAGTTTAACCTCACCGCACACACACAAATTGGGAGTAAAAATGTCTGGTTCTGG
AAGCTTCGCGGTGTCGCGGAGCCACGGCGCTGACCGATTTTATAACCCTCCGGCTATGCG
CCGCCAGCAGCAGTTACAGAAACAGCAGCAACAACAGCAACAGCAATCGCAGCAGCAGCA
GCAGCAGAGGCAGCCGGTGCAGAGAGCAGTTAAAGTTGAGGCGGCTGTAGTTGCAGCTGA
GGTGGGGAACCGGACTGACTCAGACGATTCGACTAATACTACTACATTGTCGAAAACGTC
CTCTGTATGCTCCGCTTCACCACCAAGGCCTCCTATAAATGTTACCAATTTGGATCGTTT
GATGGAATCTGTTACTCCCTTTGTGCCCGCCCAGCATTTCTCTGAGGTGAATGTAAGAGG
CCGTAGAGCCAGGGAAGCAGAGCCATATATATATTATTGCCTTGGCGATCTTTGGGAAGC
TTTTAGTGAATGGAGCGTCTATGGTGTGGGTGTACCAATATTGTTGAATGGGAAAGATCC
AATCATTCAATATTATGTACCTTTCTTATCCGGCATCCAATTGTACGTAGATCCGTCAAA
GCCATCTTCACGCATCAGCAGGCCTGGTGAAGAGGGTGATGCTGAGTCATCAAGGGAGAC
CAGCAGTGGTGGAAGCAGTGACTGTGAAGTGGAGAGGCGGTCCATATCCTCTTCTGATGG
GCTGCGGAACCAGCATAGTCTTGTAAATCTAAATGCTCAACGACTAAATAGACTATCATT
GAGTGATAAGGCTGTCATGGTGTCATCGAGTGATGAAACTGAACTTTCTAAGTCTCTTGG
GCAACTCATGTTTGAGTATTTGGAGCATGAGCAACCACATCATCGAAGACCATTGGCTGA
CAAGATAGCGTTTTTGGCATCTCAATTTCCAGAGCTGAAGACCTGCAGGAGCGCTGATTT
ACTGCCTTCTAGTTGGATTTCTGTAGCTTGGTATCCAATTTATAGAATACCCATGGGTCC
AACATTACGGGATCTGGATGCTTCTTTTCTAACCTTTCATACTTTGTCCACACAATCAAG
AGCTTTGAGCACAGTTCACCCACGCTATCATGGTGCAACCGGTAGGAAAGTTCTAGGAAA
TGTAAATGCATGCTCAAGAATCTCTTTACCAGTCTTTGGTCTTGCTACATACAAACTGAA
AACCTCAATCTTGAGTCCTGGTGGACCTCATGAATCCGAGCAAGAAAATTCTTTATTGCA
AGCTGCAGACAGTTGGCTTCGGCGCTTGCATGTAATCCTTCCTGATTACCAGTTTTTCCG
TATGCACTATTCTCCATGGAAATGACACAGCTGTTGATGCTCCTAATTTTCTGCTGATCA
ATCATCAGCGGAGAGAAGTTTAGATTGTCAGTTCGGTTGAACAGTTTTGAGATCTAATAC
CCCAGATTCTGACACCAATGGTCAAAGATCCATATCTCCGTTTAGCCTCCATTCTAGTAG
TGTAGAAGGTTTATGTTTTGAACTGAAGGAGAATAGCTTGGACAGGCCTGAGAAATCTCA
AAGAGTGAGTCTATTTGACTCTCACAGTGGAAAAGTTGCTTCGTTGTACTTTATGATTGT
TTCCTGAAATGTGGCAGGAATCCTCATCCCTTGTTACCCTGCCTGTTTTGCTTTGCTAGG
GGTGGCTCAAAAATTATTATATGTTCTGATATGGATAGGGATGATGTCTTTGTTCAGTCA
GGAGCAGAAGTTCTTGACAAGTGATAGTGACAAAAAAATTTGGAACCTGTATTTTGGATT
GCACATACAAATTGATAGAAATACTTATAGTTTGTCAAATGCATACAAACCAATA