Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g075350.3.1
CDS Infomation

Pectinesterase (AHRD V3.3 *** K4CVB2_SOLLC)
Sequence

ATGTACAGTCTCCAATGGAAAACTCCATTGCTGCTTTCTCTTTTAGCTATCTTCATTATC
GTCTCGCTCACATTCTTCACTTCTCTCTCAAAAAACTCTTCAGAAATAGTACACATTCAT
GTTCACAAAAACATTCAAATCGCGCATTCTCATTGTGAAGACGCACTTTACAAACAGCTC
TGCGTCTCTACTCTCGCTTCAATTCCAGATCTCCCTCAAAAATCCATTTCTCAAATAATA
TCTTCCACTATCAATGTCACAGTTGTGGAAGTTAAAGCTTCTGCGAAAAACTGTACTGAT
ATTCGCGAGGATTTGCCTAAACTTGAGCCATACGAAAAACGTGCTCTCGAAGATTGTATT
CAGCTCTTGGATGATACTATAATTGAACTTAAAAGTAGTCTGGTTGCTCTTCATCCTAAT
AGATCTCTTTCGCAGAACTATAACGATTTGCAAACTCTTCTTAGTGCTGCAATGACGAAT
CAAGCAACGTGCCTCGACGGACTTGGTCGTAGTACGAAGAATTTGAGACGATTTGTTCAG
CGTCGCCTGCATACAATTTCTCACCATGTGAGCAATTGTTTGGCAATGCTGAAGAAATTG
AAGAAATCATCGTCGTCGTTGAAGACGAGGAAATCTCTGGAGATTTATCCGGAATATGGC
GTTGTACATGACGGTTTCCCCAATTGGATTAAGAGGAGAGACAGAGCACTTTTACAAACT
CCGATTAATCAGACGAAGATCGATTTGATTGTTGCTAAGGACGGTACTGGTAATTTTAGT
ACAATTAACGATGCATTGAGTGCAGCTCCAAATTCCAGTAAAACGAGATTTGTGATTTAC
ATTAAGGCGGGAGCGTATTTTGAATATGTTGAAGTAGTGAAAAAGAAGAGCATGATAATG
TTCCTCGGAGATGGAATCGGAAAAACGTTGATAAAGGGAAATCGTAGCGTCGTCGATGGA
TGGACTACTTTCCGATCTGCTACTGTCGCTGTTGTGGGAAATGGATTTTTAGCAAAGGGT
ATTACATTTGAAAACTATGCTGGACCAAGCAAGCACCAAGCAGTTGCAGTTAGAAGTGGC
TCAGATCTCTCTGCTTTCTATCAATGTAGCTTTGTAGCATATCAAGACACTCTGTACGTA
CATTCTCTTCGACAATTCTATCGCGATTGTGATGTTTATGGTACTGTAGACTTCATATTT
GGTAACGCAGCAGTCGTGTTACAAAATTGCAACTTATATGCTCGTAAACCAAACGACAAC
CAAAAGAACATATTCACAGCACAAGGAAGAGAAGATCCTAATCAGAACACTGGGATTTCC
ATTTTGAGTGGTAAAATTGCATCTGCTGCTGACTTGATTCCAGTAGAATCGACGTTTAAA
AATTACTTAGGACGGCCCTGGAAAGAATATTCCAGGACGGTTTTTATGCTAACGCATATT
GGTAGCTTGATTGATCCTGCTGGATTCTTAGAATGGAATGGTAGTTTCGCGTTGAGTACG
CTATATTATGGAGAGTATATGAACAGAGGACCGGGTTCTAATACGAGTGCTAGGGTTACA
TGGCCTGGTTATAGGGTTATTAACACTTCTGCTGAGGCTAGTTTGTTTACTGTGGGGAAT
TTCATTGAAGGAAAAGAATGGCTACCAGATACTGGATTTCCATTTTACGTTAACTTAACT
GCCTCTTAA

Peptide Sequence

PEP ID

Solyc09g075350.3.1
PEP Infomation

Pectinesterase (AHRD V3.3 *** K4CVB2_SOLLC)
Sequence

MYSLQWKTPLLLSLLAIFIIVSLTFFTSLSKNSSEIVHIHVHKNIQIAHSHCEDALYKQL
CVSTLASIPDLPQKSISQIISSTINVTVVEVKASAKNCTDIREDLPKLEPYEKRALEDCI
QLLDDTIIELKSSLVALHPNRSLSQNYNDLQTLLSAAMTNQATCLDGLGRSTKNLRRFVQ
RRLHTISHHVSNCLAMLKKLKKSSSSLKTRKSLEIYPEYGVVHDGFPNWIKRRDRALLQT
PINQTKIDLIVAKDGTGNFSTINDALSAAPNSSKTRFVIYIKAGAYFEYVEVVKKKSMIM
FLGDGIGKTLIKGNRSVVDGWTTFRSATVAVVGNGFLAKGITFENYAGPSKHQAVAVRSG
SDLSAFYQCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAVVLQNCNLYARKPNDN
QKNIFTAQGREDPNQNTGISILSGKIASAADLIPVESTFKNYLGRPWKEYSRTVFMLTHI
GSLIDPAGFLEWNGSFALSTLYYGEYMNRGPGSNTSARVTWPGYRVINTSAEASLFTVGN
FIEGKEWLPDTGFPFYVNLTAS*

Transcript Sequence

Transcript ID

Solyc09g075350.3.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *** K4CVB2_SOLLC)
Sequence

TGTTTCCTTCTAATTTTGCTCTGCAACTCTCTGTTTCCACAATGTACAGTCTCCAATGGA
AAACTCCATTGCTGCTTTCTCTTTTAGCTATCTTCATTATCGTCTCGCTCACATTCTTCA
CTTCTCTCTCAAAAAACTCTTCAGAAATAGTACACATTCATGTTCACAAAAACATTCAAA
TCGCGCATTCTCATTGTGAAGACGCACTTTACAAACAGCTCTGCGTCTCTACTCTCGCTT
CAATTCCAGATCTCCCTCAAAAATCCATTTCTCAAATAATATCTTCCACTATCAATGTCA
CAGTTGTGGAAGTTAAAGCTTCTGCGAAAAACTGTACTGATATTCGCGAGGATTTGCCTA
AACTTGAGCCATACGAAAAACGTGCTCTCGAAGATTGTATTCAGCTCTTGGATGATACTA
TAATTGAACTTAAAAGTAGTCTGGTTGCTCTTCATCCTAATAGATCTCTTTCGCAGAACT
ATAACGATTTGCAAACTCTTCTTAGTGCTGCAATGACGAATCAAGCAACGTGCCTCGACG
GACTTGGTCGTAGTACGAAGAATTTGAGACGATTTGTTCAGCGTCGCCTGCATACAATTT
CTCACCATGTGAGCAATTGTTTGGCAATGCTGAAGAAATTGAAGAAATCATCGTCGTCGT
TGAAGACGAGGAAATCTCTGGAGATTTATCCGGAATATGGCGTTGTACATGACGGTTTCC
CCAATTGGATTAAGAGGAGAGACAGAGCACTTTTACAAACTCCGATTAATCAGACGAAGA
TCGATTTGATTGTTGCTAAGGACGGTACTGGTAATTTTAGTACAATTAACGATGCATTGA
GTGCAGCTCCAAATTCCAGTAAAACGAGATTTGTGATTTACATTAAGGCGGGAGCGTATT
TTGAATATGTTGAAGTAGTGAAAAAGAAGAGCATGATAATGTTCCTCGGAGATGGAATCG
GAAAAACGTTGATAAAGGGAAATCGTAGCGTCGTCGATGGATGGACTACTTTCCGATCTG
CTACTGTCGCTGTTGTGGGAAATGGATTTTTAGCAAAGGGTATTACATTTGAAAACTATG
CTGGACCAAGCAAGCACCAAGCAGTTGCAGTTAGAAGTGGCTCAGATCTCTCTGCTTTCT
ATCAATGTAGCTTTGTAGCATATCAAGACACTCTGTACGTACATTCTCTTCGACAATTCT
ATCGCGATTGTGATGTTTATGGTACTGTAGACTTCATATTTGGTAACGCAGCAGTCGTGT
TACAAAATTGCAACTTATATGCTCGTAAACCAAACGACAACCAAAAGAACATATTCACAG
CACAAGGAAGAGAAGATCCTAATCAGAACACTGGGATTTCCATTTTGAGTGGTAAAATTG
CATCTGCTGCTGACTTGATTCCAGTAGAATCGACGTTTAAAAATTACTTAGGACGGCCCT
GGAAAGAATATTCCAGGACGGTTTTTATGCTAACGCATATTGGTAGCTTGATTGATCCTG
CTGGATTCTTAGAATGGAATGGTAGTTTCGCGTTGAGTACGCTATATTATGGAGAGTATA
TGAACAGAGGACCGGGTTCTAATACGAGTGCTAGGGTTACATGGCCTGGTTATAGGGTTA
TTAACACTTCTGCTGAGGCTAGTTTGTTTACTGTGGGGAATTTCATTGAAGGAAAAGAAT
GGCTACCAGATACTGGATTTCCATTTTACGTTAACTTAACTGCCTCTTAATTGTTTGGAT
TAGAATTCAAATCAAAGATTGTAGCTTGTAATTCTTGATGAAGTTAATGTTATTTG