Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g074680.3.1
CDS Infomation

cullin 1 (AHRD V3.3 *** AT4G02570.4)
Sequence

ATGGCACTGAGCCAGATGAAGGTTATTGAGTTGGAGGAAGGATGGGAATTTATGCAGAGG
GGAATCACTAAATTGAAGAAAATTTTAGAAGGACAACAACATTCTTTCAGCTCTGAAGAG
TACATGATGCTCTACACAACTATATATAACATGTGCACACAGAAGCCGCCAAATGATTAC
TCACAACAGTTGTATGAGAAGTACAGGGAAGCATTTGTAGAATATATCAGTTCTACAGTT
CTGCCTGCTTTACGAGAGAGGCACGATGAGTTTATGTTGAGGGAGTTTGTGAAAAGATGG
GCGAATCACAAACTTATGGCTAGGTGGCTCTCACGGTTCTTCCATTATCTCGACCGTTAT
TTTATTGCCCGAAGGTCGCTACCTGGACTTCATGAAGTTGGTCTGATGTGCTTCCGTGAT
CTGATTTATCAGGAGTTGAACGGTAAAGCTAGAGATGCAGTTATTGTGTTGATTGAACAA
GAACGTGAGGGTGAGCAGATCGACAGGGGTCTACTGAAGAATGTGCTCGACATATTTGTT
GGAATTGGCATGGGGGAAATGGAGTATTATGAGAATGATTTTGAAGAAGCGATGCTTAAA
GATACTGCAGCTTATTATTCTCGGAAAGCTTCAAGTTGGATTGTGGAAGATTCTTGTCCA
GATTATATGTTGAAGGCAGAGGAGTGCTTGAAGAAAGAGAAAGATAGAGTGTCTCATTAT
CTCCATGTTCTTAGTGAGACAAAACTTCTAGAGAAAGTGCAAAATGAATTGTTAGTTGTA
TATACCAATCAGTTACTTGAGAAGGAGCATTCTGGATGCCGAGTATTGCTAAGAGATGAT
AAGGTAGAGGATTTATCTCGAATGTATAGGCTATTCCATAGAGTCCCCAAGGGATTGGAA
CCTGTTTCAAATATGTTTAAGCAGCATGTCGTTGCTGAAGGCATGGTCTTGGTGCAACAA
GCTGAAGATACGACAAATAGCAAGGCCGAAAGTTCAGGCTCAGGAGAGCAGCAGGTCTTC
GTTAGAAAGTTGATTGAGCTTCACGATAAGTATATGGCTTATGTTACGAACTGTTTTGCT
AATAACTCTCTCTTTCATAAGGCTCTCAAGGAGGCATTTGAGGTCTTCTGCAACAAAATT
GTATCTGGTTGTTCAAGTGCAGAGCTCCTTGCTTCTTTTTGTGATAATATTCTTAAGAAA
GGTGGGAGCGAAAAACTCAGTGATGATGATATTGAGGAGACCTTGGATAAGGTGGTCAAG
CTTCTCGCTTATATTAGTGATAAAGACCTTTTTGCAGAGTTCTACAGGAAGAAGCTTTCT
CGTCGACTGCTCTTCGATAAAAGTGCCAATGATGACCACGAAAGGCTTATCTTAACAAAG
CTAAAGCAACAGTGTGGTGGGCAGTTCACATCAAAGATGGAGGGGATGGTGACAGACTTG
ACTTTGGCTAGGGAAAATCAAAACCATTTTCAAGAATATCTCAGCAACAACCCTGCCGCA
AGTCCTGGAATTGATTTAACTGTCACAGTTCTTACAACTGGGTTCTGGCCTAGTTATAAA
TCTTCTGATTTGTGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTC
TATCAGACAAAAACGAAACACAGGAAATTGACATGGATTTATTCATTGGGTACGTGTAAC
ATCAACGGGAAGTTTGATTCAAAAACCATTGAACTGATTCTGGGAACTTATCAGGCTGCT
GTTTTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTTA
AATTTGGCTGATGATGACTTGATCAGATTGCTTCAGTCCCTTTCATGTGCCAAGTATAAA
ATTCTGATCAAGGAACCTAGCAATAGAACTGTTTCTTCTTCTGATCATTTTGAGTTCAAC
TCCAAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTCCTGTGGATGAAAGG
AAAAAGGTAGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCGTG
CGCATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTGTTGGAGTGTGTTGAG
CAGTTGAGCCGAATGTTTAAGCCTGACTTCAAAGCAATCAAAAAGCGAATTGAAGATCTC
ATCACTAGAGATTACTTGGAAAGAGACAAAGAGAACCCGAATTTGTTCAAGTATTTAGCC
TGA

Peptide Sequence

PEP ID

Solyc09g074680.3.1
PEP Infomation

cullin 1 (AHRD V3.3 *** AT4G02570.4)
Sequence

MALSQMKVIELEEGWEFMQRGITKLKKILEGQQHSFSSEEYMMLYTTIYNMCTQKPPNDY
SQQLYEKYREAFVEYISSTVLPALRERHDEFMLREFVKRWANHKLMARWLSRFFHYLDRY
FIARRSLPGLHEVGLMCFRDLIYQELNGKARDAVIVLIEQEREGEQIDRGLLKNVLDIFV
GIGMGEMEYYENDFEEAMLKDTAAYYSRKASSWIVEDSCPDYMLKAEECLKKEKDRVSHY
LHVLSETKLLEKVQNELLVVYTNQLLEKEHSGCRVLLRDDKVEDLSRMYRLFHRVPKGLE
PVSNMFKQHVVAEGMVLVQQAEDTTNSKAESSGSGEQQVFVRKLIELHDKYMAYVTNCFA
NNSLFHKALKEAFEVFCNKIVSGCSSAELLASFCDNILKKGGSEKLSDDDIEETLDKVVK
LLAYISDKDLFAEFYRKKLSRRLLFDKSANDDHERLILTKLKQQCGGQFTSKMEGMVTDL
TLARENQNHFQEYLSNNPAASPGIDLTVTVLTTGFWPSYKSSDLCLPVEMVKCVEVFKEF
YQTKTKHRKLTWIYSLGTCNINGKFDSKTIELILGTYQAAVLLLFNSSDRLSYSEIKSQL
NLADDDLIRLLQSLSCAKYKILIKEPSNRTVSSSDHFEFNSKFTDRMRRIRVPLPPVDER
KKVVEDVDKDRRYAIDACIVRIMKSRKVLPHQQLVLECVEQLSRMFKPDFKAIKKRIEDL
ITRDYLERDKENPNLFKYLA*

Transcript Sequence

Transcript ID

Solyc09g074680.3.1
Transcript Infomation

cullin 1 (AHRD V3.3 *** AT4G02570.4)
Sequence

ATTCTTAAAAAAAACTCAAATTTAATAATAGAAAGGAAATCTCCAAATACAAAACCAAGT
GAAATCTGGACTCTGAAAGTGTAATTTGGTTGAAATTCAACCGCCTCAGTCTCTACCCTT
TTCTCTATAAATACACTGATTCTAAAGGTTTTGGAGTTTGTCTCTTTTCATTCACCGCAT
TGTTTCAGAGTTTCGGAAAAACAGAATCCATCCATCAACGGGAAGGCGAGAGGGCGATTG
TGATTCAGTTCCCCGGTGATCGATCCATTTCTCCGGTGGACGTAAAATACGTGCTTCTAA
GATGGCACTGAGCCAGATGAAGGTTATTGAGTTGGAGGAAGGATGGGAATTTATGCAGAG
GGGAATCACTAAATTGAAGAAAATTTTAGAAGGACAACAACATTCTTTCAGCTCTGAAGA
GTACATGATGCTCTACACAACTATATATAACATGTGCACACAGAAGCCGCCAAATGATTA
CTCACAACAGTTGTATGAGAAGTACAGGGAAGCATTTGTAGAATATATCAGTTCTACAGT
TCTGCCTGCTTTACGAGAGAGGCACGATGAGTTTATGTTGAGGGAGTTTGTGAAAAGATG
GGCGAATCACAAACTTATGGCTAGGTGGCTCTCACGGTTCTTCCATTATCTCGACCGTTA
TTTTATTGCCCGAAGGTCGCTACCTGGACTTCATGAAGTTGGTCTGATGTGCTTCCGTGA
TCTGATTTATCAGGAGTTGAACGGTAAAGCTAGAGATGCAGTTATTGTGTTGATTGAACA
AGAACGTGAGGGTGAGCAGATCGACAGGGGTCTACTGAAGAATGTGCTCGACATATTTGT
TGGAATTGGCATGGGGGAAATGGAGTATTATGAGAATGATTTTGAAGAAGCGATGCTTAA
AGATACTGCAGCTTATTATTCTCGGAAAGCTTCAAGTTGGATTGTGGAAGATTCTTGTCC
AGATTATATGTTGAAGGCAGAGGAGTGCTTGAAGAAAGAGAAAGATAGAGTGTCTCATTA
TCTCCATGTTCTTAGTGAGACAAAACTTCTAGAGAAAGTGCAAAATGAATTGTTAGTTGT
ATATACCAATCAGTTACTTGAGAAGGAGCATTCTGGATGCCGAGTATTGCTAAGAGATGA
TAAGGTAGAGGATTTATCTCGAATGTATAGGCTATTCCATAGAGTCCCCAAGGGATTGGA
ACCTGTTTCAAATATGTTTAAGCAGCATGTCGTTGCTGAAGGCATGGTCTTGGTGCAACA
AGCTGAAGATACGACAAATAGCAAGGCCGAAAGTTCAGGCTCAGGAGAGCAGCAGGTCTT
CGTTAGAAAGTTGATTGAGCTTCACGATAAGTATATGGCTTATGTTACGAACTGTTTTGC
TAATAACTCTCTCTTTCATAAGGCTCTCAAGGAGGCATTTGAGGTCTTCTGCAACAAAAT
TGTATCTGGTTGTTCAAGTGCAGAGCTCCTTGCTTCTTTTTGTGATAATATTCTTAAGAA
AGGTGGGAGCGAAAAACTCAGTGATGATGATATTGAGGAGACCTTGGATAAGGTGGTCAA
GCTTCTCGCTTATATTAGTGATAAAGACCTTTTTGCAGAGTTCTACAGGAAGAAGCTTTC
TCGTCGACTGCTCTTCGATAAAAGTGCCAATGATGACCACGAAAGGCTTATCTTAACAAA
GCTAAAGCAACAGTGTGGTGGGCAGTTCACATCAAAGATGGAGGGGATGGTGACAGACTT
GACTTTGGCTAGGGAAAATCAAAACCATTTTCAAGAATATCTCAGCAACAACCCTGCCGC
AAGTCCTGGAATTGATTTAACTGTCACAGTTCTTACAACTGGGTTCTGGCCTAGTTATAA
ATCTTCTGATTTGTGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATT
CTATCAGACAAAAACGAAACACAGGAAATTGACATGGATTTATTCATTGGGTACGTGTAA
CATCAACGGGAAGTTTGATTCAAAAACCATTGAACTGATTCTGGGAACTTATCAGGCTGC
TGTTTTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTT
AAATTTGGCTGATGATGACTTGATCAGATTGCTTCAGTCCCTTTCATGTGCCAAGTATAA
AATTCTGATCAAGGAACCTAGCAATAGAACTGTTTCTTCTTCTGATCATTTTGAGTTCAA
CTCCAAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTCCTGTGGATGAAAG
GAAAAAGGTAGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCGT
GCGCATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTGTTGGAGTGTGTTGA
GCAGTTGAGCCGAATGTTTAAGCCTGACTTCAAAGCAATCAAAAAGCGAATTGAAGATCT
CATCACTAGAGATTACTTGGAAAGAGACAAAGAGAACCCGAATTTGTTCAAGTATTTAGC
CTGAAGCAATAATCTGTGTGCTCGGCTGATTTTTTTTTTTGTTCTCTGCACATCACATTG
AATACAACTGGCTTCTCCATGTCACTTAATAGGGATTGTAGCACAGATAATTTTTCTTAC
TTTTGCCTAGTAGTAGGAACTGTGCCAGTTATTGGGTATCACACCACCTTCATTTTTCGT
CAAGAAGTTGGCGGAAACTTTGCTGTCTTTATAGTACTTCCTCCATTTCAAATTAATTGA
ATTGGTGAGATATTATTCATTTTTCAGTTGCAACCCTTATATTTTGATTAACATTAGCAT
ATGCCACCTCCTGCAAAATGTACTATCATCAACACAAAAATCAGCTCTCACATAATTTGG
CTAGCTGAAGGAGTTTTTTTGTATATTAAATCGTTACA