Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g074460.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G01980.1)
Sequence

ATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTAC
CAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGT
AACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCG
GTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTT
CTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAG
CACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGCTGCCAATCGGCGA
AACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTC
CGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCA
GAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGA
GCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAG
CAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAG
AATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGG
AATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAG
CGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCA
GGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGA

Peptide Sequence

PEP ID

Solyc09g074460.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G01980.1)
Sequence

MAEAPSVPAPTGSDPDYWCYQCETRVAVETLPDLPADVICNNCKSGFVESIPSRVVSVSP
VTASTDQIDDPAFGNQFIQVLRLIAEAALDNDAPPPPPSEHADPSDDDFLRVELDAANRR
NRILDWAEILMGLEDHSIELRLQVPDGDGYVGNPGDYVDAEGYEALLQTLAESDGGGRRG
APPASKSAIEGLNTLVIKEEQEVMACAICKDVVNVGEMAKNLPCGHGYHDDCIVQWLGSR
NSCPVCRFELPTDDPEYEEERKKRGACVTSSGSSSSSEAPGAAAAADDSSPSCL*

Transcript Sequence

Transcript ID

Solyc09g074460.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G01980.1)
Sequence

ATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTAC
CAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGT
AACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCG
GTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTT
CTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAG
CACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGCTGCCAATCGGCGA
AACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTC
CGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCA
GAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGA
GCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAG
CAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAG
AATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGG
AATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAG
CGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCA
GGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGA