Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g074420.3.1
CDS Infomation	Protease Do-like 2, chloroplastic (AHRD V3.3 *** DEGP2_ARATH)
Sequence	ATGGCAGCTGCAACCTGCTGCTTCTCTGCCGGCACCGGCACCGGAAATTCACTCTCCTTT CTAACATCTCACCGCCCCTCAACCTCCCTAAGACCACCTTCTTCATTATTTATTCCGAAA GCTGTACATCAAAAGTCATCATCTCCTCCTCCTCATCCCCCTTCACAGAAAGCAGGTGGT AAACAGAACTTCATATGGAGATCAAAAGACGAAAGACATTTAGCAAATAATGATGGAAGA AGCAGTAAAAATGAAACGGGACGATCTAAATCAACTGCATTTAAATTTTCTGGTCTGCAG AGGAAAGGATCAGGAAAGGGCGCTCCATTTGAGTCAAAGGAGCCGCAGGTAGAAACTGGT TTCATTGAAGATGCACCTTTTCTCAATGCAGTTGTGAAGGTTTTCTGTACACACACTGCT CCAGATTATTCCCTCCCGTGGCAGAAACAAAGGCAATTTGCAAGTACTGGAAGTGCTTTC ATGATTGGTGACGGGAAACTCCTGACGAATGCTCATTGTGTTGAACATGGTACCCAGGTT AAAGTGAAGAGAAGGGGAGATGACACTAAATATGTTGCCAAGGTTCTAGCTAGAGGAGTG GAGTGTGACATAGCCTTGCTATCTGTGGAAAGCAAGGACTTCTGGAAAGGAGCTGAACCC CTCTGCTTTGGACACTTGCCTCATCTGCAGGATGCTGTAACTGTTGTAGGTTATCCACTT GGAGGAGATACCATTTCTGTGACAAAAGGGGTGGTATCAAGAGTAGAGGTCACATCATAT GCTCATGGATCATCTGAGCTTCTGGGCATTCAAATAGATGCAGCAATAAATCCTGGTAAT AGTGGGGGCCCTGCATTCAATGATGATGGAGAGTGCATAGGAGTGGCATTTCAGGTTTAC AGGTCAGATGACGTTGAGAATATTGGTTATGTTATCCCAGCCATGGTAGTGTCTCATTTT CTGGAAGACTACGAAAGGAACGGGAAGTACAGTGGTTTTCCTTGCCTTGGGGTATTGTTG CAAAAATTGGAGAATCCAGCACTACGTGCCTGCTTGAGAGTTCCTTCGAATGAGGGCGTA CTCGTACGGAAAATCGAGCCTACTTCTGATGTTAGCAATGTCGTGAAAGAGGGCGACGTG ATTGTTAGCTTTGATGGTGTTCGTGTCGGGTGTGAAGGGACAGTGCCATTTCGATCAAGT GAACGCATTGCGTTTCGCTATCTCATCAGTCAAAAGTTCACTGGTGATGTAGCTGAACTT GGTATTATTAGAGCTGGGGAATTCCTGAAAGTTCAAGCAGTTTTGAAGCCACGTGTGCAT TTGGTTCCTTATCACATAGAAGGCGGTCAACCTTCATACCTAATAGTTGCTGGCTTGGTG TTTACACCTCTATCCGAACCCTTAATAGAGGAAGAATGTGAAGATACCATAGGGCTAAAA CTATTGATAAAGGCTCGATACTCTTTTGCAAAGTTTGAAGGGGAACAGATTGTCATACTA TCACAGGTCTTGGCAAATGAAGTGAATATTGGGTATGAGGATTTAAGCAATGAGCAGGTC TTAAAGTTGAATGGGACTCGAATTAAGAACATTCACCATTTGGCTCATCTAGTGGATTCT TGCAAGGATAAATATCTAGTGTTTGAATTTGAAGACAACTTTCTGGTTGCTCTAGAAAGG GAGGCAGCCTCGTCTGCGTCATCTAGTATTCTTATAGACTATGGTATTCCGGCTGAAAGA TCATCGGATCTCTTGGAGCCATATGTTGATTCTATTGGACCATATGAAGCAACTGATCAA CATGAGTTTGGTGATAGTCCAGTTTCTAATTCAGAATTTGGATATGATGGGCTTCTTTGG GCTTGA

Peptide Sequence

PEP ID	Solyc09g074420.3.1
PEP Infomation	Protease Do-like 2, chloroplastic (AHRD V3.3 *** DEGP2_ARATH)
Sequence	MAAATCCFSAGTGTGNSLSFLTSHRPSTSLRPPSSLFIPKAVHQKSSSPPPHPPSQKAGG KQNFIWRSKDERHLANNDGRSSKNETGRSKSTAFKFSGLQRKGSGKGAPFESKEPQVETG FIEDAPFLNAVVKVFCTHTAPDYSLPWQKQRQFASTGSAFMIGDGKLLTNAHCVEHGTQV KVKRRGDDTKYVAKVLARGVECDIALLSVESKDFWKGAEPLCFGHLPHLQDAVTVVGYPL GGDTISVTKGVVSRVEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDDGECIGVAFQVY RSDDVENIGYVIPAMVVSHFLEDYERNGKYSGFPCLGVLLQKLENPALRACLRVPSNEGV LVRKIEPTSDVSNVVKEGDVIVSFDGVRVGCEGTVPFRSSERIAFRYLISQKFTGDVAEL GIIRAGEFLKVQAVLKPRVHLVPYHIEGGQPSYLIVAGLVFTPLSEPLIEEECEDTIGLK LLIKARYSFAKFEGEQIVILSQVLANEVNIGYEDLSNEQVLKLNGTRIKNIHHLAHLVDS CKDKYLVFEFEDNFLVALEREAASSASSSILIDYGIPAERSSDLLEPYVDSIGPYEATDQ HEFGDSPVSNSEFGYDGLLWA*

Transcript Sequence

Transcript ID	Solyc09g074420.3.1
Transcript Infomation	Protease Do-like 2, chloroplastic (AHRD V3.3 *** DEGP2_ARATH)
Sequence	ATATAGTACCTTAGTTTAGATCCAAAAATCACCCTCAAAATTAAATTCAAACCCACAATA GCAAAAGGGTTGTGAATAATTACATTAGTATTTACTTTATTGCGGATAAGGAAACAGTCC ATCTTCACTCTCTTCTCCATTGCATAAATATGGCAGCTGCAACCTGCTGCTTCTCTGCCG GCACCGGCACCGGAAATTCACTCTCCTTTCTAACATCTCACCGCCCCTCAACCTCCCTAA GACCACCTTCTTCATTATTTATTCCGAAAGCTGTACATCAAAAGTCATCATCTCCTCCTC CTCATCCCCCTTCACAGAAAGCAGGTGGTAAACAGAACTTCATATGGAGATCAAAAGACG AAAGACATTTAGCAAATAATGATGGAAGAAGCAGTAAAAATGAAACGGGACGATCTAAAT CAACTGCATTTAAATTTTCTGGTCTGCAGAGGAAAGGATCAGGAAAGGGCGCTCCATTTG AGTCAAAGGAGCCGCAGGTAGAAACTGGTTTCATTGAAGATGCACCTTTTCTCAATGCAG TTGTGAAGGTTTTCTGTACACACACTGCTCCAGATTATTCCCTCCCGTGGCAGAAACAAA GGCAATTTGCAAGTACTGGAAGTGCTTTCATGATTGGTGACGGGAAACTCCTGACGAATG CTCATTGTGTTGAACATGGTACCCAGGTTAAAGTGAAGAGAAGGGGAGATGACACTAAAT ATGTTGCCAAGGTTCTAGCTAGAGGAGTGGAGTGTGACATAGCCTTGCTATCTGTGGAAA GCAAGGACTTCTGGAAAGGAGCTGAACCCCTCTGCTTTGGACACTTGCCTCATCTGCAGG ATGCTGTAACTGTTGTAGGTTATCCACTTGGAGGAGATACCATTTCTGTGACAAAAGGGG TGGTATCAAGAGTAGAGGTCACATCATATGCTCATGGATCATCTGAGCTTCTGGGCATTC AAATAGATGCAGCAATAAATCCTGGTAATAGTGGGGGCCCTGCATTCAATGATGATGGAG AGTGCATAGGAGTGGCATTTCAGGTTTACAGGTCAGATGACGTTGAGAATATTGGTTATG TTATCCCAGCCATGGTAGTGTCTCATTTTCTGGAAGACTACGAAAGGAACGGGAAGTACA GTGGTTTTCCTTGCCTTGGGGTATTGTTGCAAAAATTGGAGAATCCAGCACTACGTGCCT GCTTGAGAGTTCCTTCGAATGAGGGCGTACTCGTACGGAAAATCGAGCCTACTTCTGATG TTAGCAATGTCGTGAAAGAGGGCGACGTGATTGTTAGCTTTGATGGTGTTCGTGTCGGGT GTGAAGGGACAGTGCCATTTCGATCAAGTGAACGCATTGCGTTTCGCTATCTCATCAGTC AAAAGTTCACTGGTGATGTAGCTGAACTTGGTATTATTAGAGCTGGGGAATTCCTGAAAG TTCAAGCAGTTTTGAAGCCACGTGTGCATTTGGTTCCTTATCACATAGAAGGCGGTCAAC CTTCATACCTAATAGTTGCTGGCTTGGTGTTTACACCTCTATCCGAACCCTTAATAGAGG AAGAATGTGAAGATACCATAGGGCTAAAACTATTGATAAAGGCTCGATACTCTTTTGCAA AGTTTGAAGGGGAACAGATTGTCATACTATCACAGGTCTTGGCAAATGAAGTGAATATTG GGTATGAGGATTTAAGCAATGAGCAGGTCTTAAAGTTGAATGGGACTCGAATTAAGAACA TTCACCATTTGGCTCATCTAGTGGATTCTTGCAAGGATAAATATCTAGTGTTTGAATTTG AAGACAACTTTCTGGTTGCTCTAGAAAGGGAGGCAGCCTCGTCTGCGTCATCTAGTATTC TTATAGACTATGGTATTCCGGCTGAAAGATCATCGGATCTCTTGGAGCCATATGTTGATT CTATTGGACCATATGAAGCAACTGATCAACATGAGTTTGGTGATAGTCCAGTTTCTAATT CAGAATTTGGATATGATGGGCTTCTTTGGGCTTGATCATGACATGTGAAGTTCAATTCAA GGTTCTCATTTGGACTATTGTTCCTTCATACTAAAGAACACGGATGATCAGGCAACATTG ACCATGCGGAATCTGTATGGCAGGTGTTCTAGTTTGCTGTCTCCTTTGTCAAAGCTGTTG CAAGATTGTCCCTGAGCGTGGATAATGTTCTATACAAATGAAGTGAACAACAAAAATGTC CCCAGGTACACGCATTTTTTTTCACGTGTAAGAAGGATGTTAGAGAAATTGACTTGATGT AATCCATAGGATGTGTAACCCTTAAGCATGATACATTTTATGTAAAACATCATTCCAAGG AGGAAAAAAAAACTTTTAGAAACATTAGTTTCACATTTTAAGGTTGGTAGAATTAGGGTC TTTTCACGTTCTTATCTTAAAAAGTAA