Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g074190.2.1
CDS Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061DXX2_THECC)
Sequence	ATGATTGATGATAACATCAATGATGATGTCAATGAAAAGTCGTTGGTGGTTTTAGACAAG GAAAAAGGAAGCATGAATAAGAGAAAGTCTGCATCTGAGCTTCCTCTAGAAACTCTTACT AATTCACCAGTGTCATGTCTAACGCAATTTCATAAATATAAACTATTAGATGAAGCACCG GAAAGAGACACTATTGTTGAGATTAACCCATTGAAGGGCGGGTGTCCTCAGTCTGATGCA AAACAAAAAGGGGAAATGCCACCAGATACAGATTGGGAGAATATGATAACTACTTTACTT CTGGAGCTTTTAACCCATAATTTGTCCACAATTTTCCAGATTGCAGTCAAGAGGATTGTC AAATATGGATATAGTGAAGAAATTGCTGAATGGGTTATCATGCGGAGTGGTTTTTATCAT GGAAGAAAAGACACAGTCTCAAATGTTGTTGATGGGGCCTTGGCTGTATTGAGTAGGGAA AATGTTTTCGATATTAGTAAATCTATTGTATTTGAAGATTTACCGAGTTTGGTTAATTAC ACATTGCTAAAGATGGTATGTGTGCTAAGGCAGATTAAGACATATTTTCCAGTTGTGGAA GCATTGTGGTGGCTGTTAATATTCGACTTGAATCCGATGCATGCACTTACAATGAAAGGT AATCATCTGGTTGAGTTACGCAGTCAAGAAAGTCTAGGTGATAGCTCTTTTAGTTTGAAT CTTCCCCGATCAAAGACAGAGGCTTCCAATAATACTCAATCAAACTCGGATAAACAGCAG TTGTCCCCAAATTCTCAAACCTGGCAATCCAAATTTCCTATTGCTAGTGAAACCCTTCAA GAACATGAATCTAAAAATTCAAATGTTTGTCAAGCAGAGAAAGGAAAAGGAAGTTTCTTA CCTTGTTCAGAGGCTAAATCTAAAGGACCAGTTTTAGAAGACAAATCAGGAACTGGTAAA AACTCCTTAAATTCCAAGAAGGATTTGTGTAGGAGAAATACATTTCAGTTTGAGAAGAAC TTTAGAAGTCGTACGAGCAAGAATATTAAGGTAAACATGAATGCCTGTGAAAGTTTAGTT TTGGACAAGAATGTGAACTTATCATTTACTAGAGCAACAAAAAAGAATTCACGCTCCAAA GCATCAACTTGCTTTAAAAACAATCACCCTTTAGAAAAAGCAAGTTATGATAGTCCATGC CATTCTTCATCCATTACACCTACAAGTGACACCTCCAAACTACAACCTATGCAAGCTAAT GTAAATGATAAGGATCTGGATTCATTAGTCGTGGAGCCCACGTCTAGCAAAAAGGTCCTA GACAACACAACTATTTCTTCTACGCTTCTAGATTATTATGTTGGTATCCCTTATGATGAG TCTCTGGGGAAATATGTCCCTCAAAATGAGAGAGATGAAATTATATTGTTGCGAACTTCC CATTTGAAATCACTACAGAAAGAGCTCCAATGGTGGTCTGATTGGGCAAATGAGAAGGTA ATGCAGGCTACCTGGAGGCTTGCTCAGGACCAGGCTGAGCTTAAAATGTTGAGGCAAGAA AAAGAAGATGCTGAAAAAGTTCACCAAGAAAAGCAAATGTTGGAGAAAGGCACCATGGCA AGGATTATGGAGATGGAGCAAGCACAGGTGAATACTAAGTCCATGAGTGAGACACTTAAT TCTCTTCTTAAAACTTTGGAGATGGATAATGTTGGACTAAAAAAGGATATAGAGGCTTTA ATGCTCTCCACTAGTGAGAATGCGGTGAACCAGAACAATGCGTTAGCAAAGGAGCAGGAG GCAATAAAGAAGTGCCAAGTCGCAGACATGGAGAAACACTCATTTGAGAAGGATTTATCT ACTTTCAAGCAGGAAAAAGCTTCTTTACTGCAACAGCAAGAGAAAACCAACAAGGTTGTG GACCAGTTTAAGGTCCTATTGAAGCAGGAGGAACGGATGAAACAAAGGCTTCTAAGACAA GCTGACTCCCTAAAAGCTGAAAAAGAACAACTCTGTGTTCACGGAAAAGTGCAGCGAGAT AATTTTAGAGAAAGGGTAAAGATAAACATGCAAAAGTATAAACAAGATATCCAAAAGTGT GAGAGTGAAATCTCTCAGTTGAGATTCCAATCTGAAAGATCAAAAATAGAGGCACTTAAA CGAGGGATTCCACAAATGACAAATGGTTTAGCAGCTTTTGCAGAAAGTTCTGGCTCTAAT GTTCTAAATGTAGAGAGGGAATGTGTTATGTGTATGAATGAGCAGATAACAATTGTTTTT CTCCCTTGTGCACATCAAGTCCTTTGTGAAGATTGTAATGTGTTTCACCAAAAGAAAGGA ATGGACAAATGCCCTTCCTGTAGGACATCAATTAAGGAGAGAATTAGTGTCCGCTTTCCA GATTCAGAATAG

Peptide Sequence

PEP ID	Solyc09g074190.2.1
PEP Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061DXX2_THECC)
Sequence	MIDDNINDDVNEKSLVVLDKEKGSMNKRKSASELPLETLTNSPVSCLTQFHKYKLLDEAP ERDTIVEINPLKGGCPQSDAKQKGEMPPDTDWENMITTLLLELLTHNLSTIFQIAVKRIV KYGYSEEIAEWVIMRSGFYHGRKDTVSNVVDGALAVLSRENVFDISKSIVFEDLPSLVNY TLLKMVCVLRQIKTYFPVVEALWWLLIFDLNPMHALTMKGNHLVELRSQESLGDSSFSLN LPRSKTEASNNTQSNSDKQQLSPNSQTWQSKFPIASETLQEHESKNSNVCQAEKGKGSFL PCSEAKSKGPVLEDKSGTGKNSLNSKKDLCRRNTFQFEKNFRSRTSKNIKVNMNACESLV LDKNVNLSFTRATKKNSRSKASTCFKNNHPLEKASYDSPCHSSSITPTSDTSKLQPMQAN VNDKDLDSLVVEPTSSKKVLDNTTISSTLLDYYVGIPYDESLGKYVPQNERDEIILLRTS HLKSLQKELQWWSDWANEKVMQATWRLAQDQAELKMLRQEKEDAEKVHQEKQMLEKGTMA RIMEMEQAQVNTKSMSETLNSLLKTLEMDNVGLKKDIEALMLSTSENAVNQNNALAKEQE AIKKCQVADMEKHSFEKDLSTFKQEKASLLQQQEKTNKVVDQFKVLLKQEERMKQRLLRQ ADSLKAEKEQLCVHGKVQRDNFRERVKINMQKYKQDIQKCESEISQLRFQSERSKIEALK RGIPQMTNGLAAFAESSGSNVLNVERECVMCMNEQITIVFLPCAHQVLCEDCNVFHQKKG MDKCPSCRTSIKERISVRFPDSE*

Transcript Sequence

Transcript ID	Solyc09g074190.2.1
Transcript Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061DXX2_THECC)
Sequence	ATCAATTTTTTTTATTTATTGATGTAAGCCTGTCTTTGGGAGTTACACATACACGATTTC TCCTTAATCGTGTTCACTGGAGTCAATTTTATTTTCTGTTAATTAGCCTATGAAATAAAC ATTGCAGTGTGGGTTTTTCCTTTTATTTGGGAACCCTAATTCTCTGTTGTGGTTATGTGT TATCTTAACTTATAATCCCAACACGCCTATATCATCACTTGAATGAATTTTTGTTGCAGG ACCAAAAATTTTGGCTTGACAATTGATTGATCAAAGTACAACACTCATAGAAAACACAAT AAACATGATTGATGATAACATCAATGATGATGTCAATGAAAAGTCGTTGGTGGTTTTAGA CAAGGAAAAAGGAAGCATGAATAAGAGAAAGTCTGCATCTGAGCTTCCTCTAGAAACTCT TACTAATTCACCAGTGTCATGTCTAACGCAATTTCATAAATATAAACTATTAGATGAAGC ACCGGAAAGAGACACTATTGTTGAGATTAACCCATTGAAGGGCGGGTGTCCTCAGTCTGA TGCAAAACAAAAAGGGGAAATGCCACCAGATACAGATTGGGAGAATATGATAACTACTTT ACTTCTGGAGCTTTTAACCCATAATTTGTCCACAATTTTCCAGATTGCAGTCAAGAGGAT TGTCAAATATGGATATAGTGAAGAAATTGCTGAATGGGTTATCATGCGGAGTGGTTTTTA TCATGGAAGAAAAGACACAGTCTCAAATGTTGTTGATGGGGCCTTGGCTGTATTGAGTAG GGAAAATGTTTTCGATATTAGTAAATCTATTGTATTTGAAGATTTACCGAGTTTGGTTAA TTACACATTGCTAAAGATGGTATGTGTGCTAAGGCAGATTAAGACATATTTTCCAGTTGT GGAAGCATTGTGGTGGCTGTTAATATTCGACTTGAATCCGATGCATGCACTTACAATGAA AGGTAATCATCTGGTTGAGTTACGCAGTCAAGAAAGTCTAGGTGATAGCTCTTTTAGTTT GAATCTTCCCCGATCAAAGACAGAGGCTTCCAATAATACTCAATCAAACTCGGATAAACA GCAGTTGTCCCCAAATTCTCAAACCTGGCAATCCAAATTTCCTATTGCTAGTGAAACCCT TCAAGAACATGAATCTAAAAATTCAAATGTTTGTCAAGCAGAGAAAGGAAAAGGAAGTTT CTTACCTTGTTCAGAGGCTAAATCTAAAGGACCAGTTTTAGAAGACAAATCAGGAACTGG TAAAAACTCCTTAAATTCCAAGAAGGATTTGTGTAGGAGAAATACATTTCAGTTTGAGAA GAACTTTAGAAGTCGTACGAGCAAGAATATTAAGGTAAACATGAATGCCTGTGAAAGTTT AGTTTTGGACAAGAATGTGAACTTATCATTTACTAGAGCAACAAAAAAGAATTCACGCTC CAAAGCATCAACTTGCTTTAAAAACAATCACCCTTTAGAAAAAGCAAGTTATGATAGTCC ATGCCATTCTTCATCCATTACACCTACAAGTGACACCTCCAAACTACAACCTATGCAAGC TAATGTAAATGATAAGGATCTGGATTCATTAGTCGTGGAGCCCACGTCTAGCAAAAAGGT CCTAGACAACACAACTATTTCTTCTACGCTTCTAGATTATTATGTTGGTATCCCTTATGA TGAGTCTCTGGGGAAATATGTCCCTCAAAATGAGAGAGATGAAATTATATTGTTGCGAAC TTCCCATTTGAAATCACTACAGAAAGAGCTCCAATGGTGGTCTGATTGGGCAAATGAGAA GGTAATGCAGGCTACCTGGAGGCTTGCTCAGGACCAGGCTGAGCTTAAAATGTTGAGGCA AGAAAAAGAAGATGCTGAAAAAGTTCACCAAGAAAAGCAAATGTTGGAGAAAGGCACCAT GGCAAGGATTATGGAGATGGAGCAAGCACAGGTGAATACTAAGTCCATGAGTGAGACACT TAATTCTCTTCTTAAAACTTTGGAGATGGATAATGTTGGACTAAAAAAGGATATAGAGGC TTTAATGCTCTCCACTAGTGAGAATGCGGTGAACCAGAACAATGCGTTAGCAAAGGAGCA GGAGGCAATAAAGAAGTGCCAAGTCGCAGACATGGAGAAACACTCATTTGAGAAGGATTT ATCTACTTTCAAGCAGGAAAAAGCTTCTTTACTGCAACAGCAAGAGAAAACCAACAAGGT TGTGGACCAGTTTAAGGTCCTATTGAAGCAGGAGGAACGGATGAAACAAAGGCTTCTAAG ACAAGCTGACTCCCTAAAAGCTGAAAAAGAACAACTCTGTGTTCACGGAAAAGTGCAGCG AGATAATTTTAGAGAAAGGGTAAAGATAAACATGCAAAAGTATAAACAAGATATCCAAAA GTGTGAGAGTGAAATCTCTCAGTTGAGATTCCAATCTGAAAGATCAAAAATAGAGGCACT TAAACGAGGGATTCCACAAATGACAAATGGTTTAGCAGCTTTTGCAGAAAGTTCTGGCTC TAATGTTCTAAATGTAGAGAGGGAATGTGTTATGTGTATGAATGAGCAGATAACAATTGT TTTTCTCCCTTGTGCACATCAAGTCCTTTGTGAAGATTGTAATGTGTTTCACCAAAAGAA AGGAATGGACAAATGCCCTTCCTGTAGGACATCAATTAAGGAGAGAATTAGTGTCCGCTT TCCAGATTCAGAATAGTTAGCAACTTCAAAATAGTAGCAGGAAAATTAAACTTGTCTTTG TATGTTTTTTTTTCAAATTTAATCTATGTCCTTTTCGTCAGGCCTTTCTTTCCTACCTTC TCTATAATAGTTGATAGAAAAATGCAAAAAAGTATAGAGATATGTAGAAAGTACATGTGA AAAGAGTTAGAAAGAGGGAGATGTGCTAAATGGTCATTGTAAATCCTCAAGTTTGATGGT TTGATACATAATATTGTTCTATGTGCTAAATTCAATCTTCCTCAAGCATTTTGTATACTT CCTCAAGCTCCCAAAGTATGATCTCAATTGTTTTGCACTTACAACAAACTTTTCTTTTTT TAATTTAACCATTCGTTATTTGAAACATATCATCTTGACAAATTTTGTTCAACCACTTGT AAATATTCATTCACATGATTCAAACTCGAGATATCTTATTCCTATTTTCCATTATAGCAC TTGCCAAACTAAAAAAAATATCGCTTTGCTGCATTGATCTATTATCTTACATTGGTTTAC CTTGTTTTAAAAATTAACTTCATATGCAAAATAGTTGGATCTTGATTGTCTACTTGCAAG AAGTGGAACATCTTTTAATGCTACATGTGGACAAAGATGATATTATATCACTAGAGCCGT TTCATTTTTCTTGATTTGGAAGTAAGTGATTCTTTTTCCACATAATTTAAATTTTTCCAA AAG