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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g074100.3.1
CDS Infomation

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (AHRD V3.3 *** AT1G51310.1)
Sequence

ATGCTAAGGGCAACCATGTCAACAATTCCTCTTCCATTTCAATATGCGCACTTGTTCTCC
CTTTACCCTTTCCAGAAGCCCCTCATCCAGGTTTTCTCTCAGCCAAGAAAGATAACAACT
ACTGCAAGACGACTGTTTTCGCTGAAACCCCTTGCAGTTTCATCCCCAATCAGGAACTAC
GGTGATGAAAGAATCGATCCCACATACTTATCTTGCTCGATGCCTCACAAGAATCCTCTC
AAAGTGGCGGTTTTGGTTAGTGGTGGCGTTGATAGCAGCGTGGCTCTTCGTCTACTTCAT
GCTGCTGGACATTCCTGCACTGCTTTTTATCTCAAGATTTGGTTTCAAGAAGACTTCGAG
AACTACTGGTCTGAATGCCCATGGGAGGATGACTTGAAATATGCGAAGGGTGTTTGTGAC
CAGGTTGATGTACCATTGGAAGTTGTCCATTTGACTGATGAATATTGGAATAATGTGGTG
TCATATATCATTGAGGAGTACAAATGTGGCAGGACTCCAAATCCAGATGTCCTTTGTAAT
ACTAGGATAAAATTTGGTCAGTCATGTTATATGAAAAGCAATCCACTATTCTTTAGTTTC
GTTAGCGTGATAGTGAAAAATTTATTTTCAGGTGCTTTTATGGATGCCATTAGTGGAATG
GAATTTGACTTTGTTGCTTCGGGACATTATGCAAAGATTGTCCATGCATCTACTGAGCAG
CTGGACGAACCTTCTGTCTTGGAATTGTCAAAAGATATGGTCAAGGACCAAACCTACTTC
CTTTCTCATCTCTCACAGGCTCAGCTTAAACGACTTATTTTCCCACTTGGATGTATTCAA
AAGGATGAAGTTCGCATGCTTGCTAAGTCATTTAATCTACCAAACCAAGAAAGGAAGGAT
TCACAAGGAATATGTTTTCTCGGCAAGATAAAATTCAGTGAATTTGTTGCTAGACACATT
GGAGAATCAGAAGGTATTATATTGGAAGCAGAGAATGGAGATTATCTTGGAAACCACCGT
GGTTTTTGGTTCTATACTATTGGTCAGCGCCAAGGTTTACGTCTTCCTGGAGGGCCCTGG
TATGCTATGAGCTCTTTCTTAGTATATGTACTATCTGTGGTCTCAAGAGGTTAA

Peptide Sequence

PEP ID

Solyc09g074100.3.1
PEP Infomation

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (AHRD V3.3 *** AT1G51310.1)
Sequence

MLRATMSTIPLPFQYAHLFSLYPFQKPLIQVFSQPRKITTTARRLFSLKPLAVSSPIRNY
GDERIDPTYLSCSMPHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFE
NYWSECPWEDDLKYAKGVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCN
TRIKFGQSCYMKSNPLFFSFVSVIVKNLFSGAFMDAISGMEFDFVASGHYAKIVHASTEQ
LDEPSVLELSKDMVKDQTYFLSHLSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQERKD
SQGICFLGKIKFSEFVARHIGESEGIILEAENGDYLGNHRGFWFYTIGQRQGLRLPGGPW
YAMSSFLVYVLSVVSRG*

Transcript Sequence

Transcript ID

Solyc09g074100.3.1
Transcript Infomation

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (AHRD V3.3 *** AT1G51310.1)
Sequence

CTCTTTCTTTCTTCTTCTTCTATATTATATTTTATTTTAAAAAGATTTTCAATCAATTTT
TTTTTTAAACTGAAAATCTTATACAGATAAGTATTAAGGTTATAACATGAAAAGAGCAAG
CCTCAGTCTACCGGACATTACTCGATAGCGCCTGAGGAGACAGAGCCGGTGCCTGCCGCC
TGCCGCCTGCCGCTGTTCATCCTCGTGTCAGGCGTATGCAAAACAGAATTTCAGAGGCCT
GACTCCCCAAATAAACAGAAATGCTAAGGGCAACCATGTCAACAATTCCTCTTCCATTTC
AATATGCGCACTTGTTCTCCCTTTACCCTTTCCAGAAGCCCCTCATCCAGGTTTTCTCTC
AGCCAAGAAAGATAACAACTACTGCAAGACGACTGTTTTCGCTGAAACCCCTTGCAGTTT
CATCCCCAATCAGGAACTACGGTGATGAAAGAATCGATCCCACATACTTATCTTGCTCGA
TGCCTCACAAGAATCCTCTCAAAGTGGCGGTTTTGGTTAGTGGTGGCGTTGATAGCAGCG
TGGCTCTTCGTCTACTTCATGCTGCTGGACATTCCTGCACTGCTTTTTATCTCAAGATTT
GGTTTCAAGAAGACTTCGAGAACTACTGGTCTGAATGCCCATGGGAGGATGACTTGAAAT
ATGCGAAGGGTGTTTGTGACCAGGTTGATGTACCATTGGAAGTTGTCCATTTGACTGATG
AATATTGGAATAATGTGGTGTCATATATCATTGAGGAGTACAAATGTGGCAGGACTCCAA
ATCCAGATGTCCTTTGTAATACTAGGATAAAATTTGGTCAGTCATGTTATATGAAAAGCA
ATCCACTATTCTTTAGTTTCGTTAGCGTGATAGTGAAAAATTTATTTTCAGGTGCTTTTA
TGGATGCCATTAGTGGAATGGAATTTGACTTTGTTGCTTCGGGACATTATGCAAAGATTG
TCCATGCATCTACTGAGCAGCTGGACGAACCTTCTGTCTTGGAATTGTCAAAAGATATGG
TCAAGGACCAAACCTACTTCCTTTCTCATCTCTCACAGGCTCAGCTTAAACGACTTATTT
TCCCACTTGGATGTATTCAAAAGGATGAAGTTCGCATGCTTGCTAAGTCATTTAATCTAC
CAAACCAAGAAAGGAAGGATTCACAAGGAATATGTTTTCTCGGCAAGATAAAATTCAGTG
AATTTGTTGCTAGACACATTGGAGAATCAGAAGGTATTATATTGGAAGCAGAGAATGGAG
ATTATCTTGGAAACCACCGTGGTTTTTGGTTCTATACTATTGGTCAGCGCCAAGGTTTAC
GTCTTCCTGGAGGGCCCTGGTATGCTATGAGCTCTTTCTTAGTATATGTACTATCTGTGG
TCTCAAGAGGTTAA