Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g073000.3.1
CDS Infomation

Elongation factor Tu (AHRD V3.3 *** K4CUX6_SOLLC)
Sequence

ATGGCGTCCGTCGTTTTCAGAAATCCCAATTCGAAGCGCGTGTTGTCACTCTCTCCTCAA
ATCTACTCGTGTTGTAGAGGAGGATCAGTTTCCACTCAGTTTTTGCTCTCCGAAACGAAA
AATGGAAATGATACTTCCAGTCTTTCTAATCCATGGTGGAGATCTATGGCCACCTTCACT
CGAACAAAACCTCATGTAAATGTGGGAACTATAGGACACGTTGATCATGGAAAGACTACT
CTTACTGCTGCAATTACAAAGGTTCTAGCAGAAGAAGGAAAGGCCAAGGCAATTGCATTT
GATGAAATTGACAAAGCCCCTGAAGAGAAGAAGAGAGGAATTACTATTGCTACAGCCCAC
GTGGAGTATGAGACAGCTAAAAGACATTATGCTCATGTTGACTGCCCAGGACACGCGGAT
TACGTTAAAAATATGATTACCGGAGCTGCCCAAATGGATGGTGGTATTCTAGTTGTATCT
GCTCCAGATGGACCTATGCCGCAAACAAAGGAGCATATTCTTCTTGCCCGCCAGGTCGGT
GTGCCCTCTCTTGTCTGCTTTTTAAACAAAGTTGATGCTGTTGACGATCCTGAGCTGCTG
GAACTTGTTGAAATGGAGCTTCGAGAACTTCTTAGTTTCTACAAGTTTCCTGGGGATGAA
ATTCCTATCATCCGTGGTTCAGCTCTTTCTGCTTTACAGGGAACTAATGAAGAAATTGGA
AAGAAAGCTATTTTAAAGTTGATGGATGCTGTAGATGAATACATTCCAGATCCAGTGCGT
CAGCTTGATAAACCATTCTTAATGCCAGTAGAAGATGTATTTTCAATTCAGGGACGTGGA
ACTGTTGCTACTGGCCGTATTGAACAGGGAACAATAAAAGTTGGAGAGGATGTGGAGATT
TTAGGGCTGATGCAGGGAACCTTAAAATCTACAGTGACTGGTGTCGAAATGTTCAAGAAG
ATCTTGGATAATGGTCAAGCTGGTGATAATGTCGGGCTTCTTCTACGTGGCTTGAAACGA
GAAGATATTACACGAGGAATGGTAATTGCAAAGCCTGGTAGTGTGAAAACGTCCAAGAAA
TTTGAGGCAGAAATATACGTACTAACTAAGGATGAAGGTGGTCGGCACACTGCTTTTTTC
TCAAACTATAGGCCTCAGTTCTACATGAGAACTGCTGACATTACCGGTAAAGTGGAGTTG
CCTGAAAATGTCAAGATGGTTATGCCCGGTGATAATGTTACAGCTACCTTTGAGCTGATA
TCTCCAGTTCCTCTTGAAACAGGACAAAGATTTGCCCTGAGAGAGGGTGGCAGAACGGTT
GGTGCTGGGGTTGTTTCTAAAGTACTGAGCTGA

Peptide Sequence

PEP ID

Solyc09g073000.3.1
PEP Infomation

Elongation factor Tu (AHRD V3.3 *** K4CUX6_SOLLC)
Sequence

MASVVFRNPNSKRVLSLSPQIYSCCRGGSVSTQFLLSETKNGNDTSSLSNPWWRSMATFT
RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH
VEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVG
VPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNEEIG
KKAILKLMDAVDEYIPDPVRQLDKPFLMPVEDVFSIQGRGTVATGRIEQGTIKVGEDVEI
LGLMQGTLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDITRGMVIAKPGSVKTSKK
FEAEIYVLTKDEGGRHTAFFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTATFELI
SPVPLETGQRFALREGGRTVGAGVVSKVLS*

Transcript Sequence

Transcript ID

Solyc09g073000.3.1
Transcript Infomation

Elongation factor Tu (AHRD V3.3 *** K4CUX6_SOLLC)
Sequence

CCTAAGGGACATTTGTTTTGCATGGGCCTGCGTAAGAAAAAGCCCCAAACTGATGATTAA
GCCCATCAACAAGGTAAGAACTCTAACGTCGTCGTTTTAGTACCTTCCAAGTAAAACCCT
TCTGGACAGCCGGAGAAACACACACAGTGGGAAAAAACCTAAACCCTTCAAATACCCCTC
AACGCCATTTCCAGCTTCGTAGCTTCTTCAATGGCGTCCGTCGTTTTCAGAAATCCCAAT
TCGAAGCGCGTGTTGTCACTCTCTCCTCAAATCTACTCGTGTTGTAGAGGAGGATCAGTT
TCCACTCAGTTTTTGCTCTCCGAAACGAAAAATGGAAATGATACTTCCAGTCTTTCTAAT
CCATGGTGGAGATCTATGGCCACCTTCACTCGAACAAAACCTCATGTAAATGTGGGAACT
ATAGGACACGTTGATCATGGAAAGACTACTCTTACTGCTGCAATTACAAAGGTTCTAGCA
GAAGAAGGAAAGGCCAAGGCAATTGCATTTGATGAAATTGACAAAGCCCCTGAAGAGAAG
AAGAGAGGAATTACTATTGCTACAGCCCACGTGGAGTATGAGACAGCTAAAAGACATTAT
GCTCATGTTGACTGCCCAGGACACGCGGATTACGTTAAAAATATGATTACCGGAGCTGCC
CAAATGGATGGTGGTATTCTAGTTGTATCTGCTCCAGATGGACCTATGCCGCAAACAAAG
GAGCATATTCTTCTTGCCCGCCAGGTCGGTGTGCCCTCTCTTGTCTGCTTTTTAAACAAA
GTTGATGCTGTTGACGATCCTGAGCTGCTGGAACTTGTTGAAATGGAGCTTCGAGAACTT
CTTAGTTTCTACAAGTTTCCTGGGGATGAAATTCCTATCATCCGTGGTTCAGCTCTTTCT
GCTTTACAGGGAACTAATGAAGAAATTGGAAAGAAAGCTATTTTAAAGTTGATGGATGCT
GTAGATGAATACATTCCAGATCCAGTGCGTCAGCTTGATAAACCATTCTTAATGCCAGTA
GAAGATGTATTTTCAATTCAGGGACGTGGAACTGTTGCTACTGGCCGTATTGAACAGGGA
ACAATAAAAGTTGGAGAGGATGTGGAGATTTTAGGGCTGATGCAGGGAACCTTAAAATCT
ACAGTGACTGGTGTCGAAATGTTCAAGAAGATCTTGGATAATGGTCAAGCTGGTGATAAT
GTCGGGCTTCTTCTACGTGGCTTGAAACGAGAAGATATTACACGAGGAATGGTAATTGCA
AAGCCTGGTAGTGTGAAAACGTCCAAGAAATTTGAGGCAGAAATATACGTACTAACTAAG
GATGAAGGTGGTCGGCACACTGCTTTTTTCTCAAACTATAGGCCTCAGTTCTACATGAGA
ACTGCTGACATTACCGGTAAAGTGGAGTTGCCTGAAAATGTCAAGATGGTTATGCCCGGT
GATAATGTTACAGCTACCTTTGAGCTGATATCTCCAGTTCCTCTTGAAACAGGACAAAGA
TTTGCCCTGAGAGAGGGTGGCAGAACGGTTGGTGCTGGGGTTGTTTCTAAAGTACTGAGC
TGAGGGTTCTGAAAATGCAAGCTTCAGTTTCAGTCTGGTTTTGTCTCAAGAGGAGCTGAA
CAAATGAAAATTCTATTGCTGCTTGCGGAAATACAAGACACGTGATGGTTGCTAATTTAA
TCATCATTTGACATTTTTTTATATTGCAATGCCAAGAGATGTGTCGTCGTGAAATTGGAT
ATATTGGAGAAAATAGTCCACTCTGTAGCATCTTATAGTTCATAAGCAGTCATTACTTTA
AATAATGAACTTTTTGGTGTATGAACTATGGTCTTTTTTTCTCTAGCATTCATGAGAAAC
TCCATGGTAGATGCTACGTTATCATATGTACACAATAAATCCTACCATCATTCCGAGCCG
TTTGCTTGCACTCCCTCAGGTATTCTGTATATGAAATGCTTCACATCTATGCACGAAATT
CGGCCGTCAGTAGTGCATAATTGAGATGAACCTTGGACTTTATCTCAGATAATGTTTTTG
ATTTTTGTTTGTGGAGATGGGGAAATGTATTATAACAAAAAACTAAGTGTAGTACAAATC
TTAGCATCTTAATTAACAAAAGGCAAAATAAACTTGTAAGATAAAGTTGGACTGATAATG
CAAATCACAATATTGTCAAGACTTAATGTAGCAGGGAAAAGATGTATACTTGACCATTAA
AGCACACAGCCTTCTGTGGTTCTGTATCCTTTTGTGGCCAGTAGTAATTATTCAACTTTG
TTTGAATGAATTAAAATTAGGCTGCTGAACATAATGTCAAAATTCTTTTTCAAGATCCGA
ATAGCTTAGAAACTCTCGTGCACATCATTATACAAGACTCCGCTACAAAACAAACTAGAC
GAGTAGAAAGGGCTTGAAACTTTGTTACTCACTACATGTTTCGTGCTGTGAAAAAATCCA
GTTCTTTCTGCTCAAATACTATATTACAGTTGAATGTCCCAAAACGAGCTATTGATATCA
TCCCCCGAGCTGTGCATGTTTTTACAATCTCTAAATCTTGTGTTCTTGAAATCAAGCAAG
CCTCAGCACTACGACTGCCAGCAAAGTTGCTGCTCTGAAGTAGATTTCCTTCACATTTTT
GTCCAAATTATTCATCATGTCATCTTCTATCATATCCAACTTGCCTGAACTTCTGTTGAT
CACCACAACTGTGTCCCTCAAATTATTGACAGCCCAAGAGAGCCATATAAGTCCAAGGCC
TAAACCAGTGTTCAATAGTCTAGGTGCAGAGAACACGATTCTTCCACAGGCTAGTCTGCA
GGCAATTGAGAAAAGGACGGCTATGCCAGTTCCAGCGATGGTAGCAGAGAACGTGGTCAG
AAAATTTGGTAGTTGGGGACCCGATTTCTTCAA