Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g072660.3.1
CDS Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G813_THECC)
Sequence	ATGAAATCCTTAAACTTCTCTGTTATGCTCTCAATATTTCTCATAGTCTCATGTTCGAGC TCGTATGCTCTTTCAGATGTTTCAACATCGTCATCTAATGGGAAGTTGTATGAATGTATT TGCCAGAATTCTGATTATTGTGTCCCTTTTTCCACAGCTTTCGTCACCCCAACAAATGAT TCGTTCAACACAATCCTACAATCTACTGCACAAAATCTCAGATGTTTACTTCCTTCTGTT ACTAAACCTCAGCTTATTTTCACACCAATGACAGAATCACATGTCCAGGCTGCAGTCATT TGCTCGAAACAGCTTGGCCTTCAGCTTAGAGTTAGAAGTGGAGGCCATGATTATGAAGGT CTTTCTTACATGTCTGATATGGAGTCTCCTTTCATCATTCTTGATCTATCAAAGCTTCGA GATATCGTGGTGAACACAGTGGACAACTATGCTTGGGCTCAGGCAGGGGCAACAGTTGGT GAAGTATATTATAGGATTTCAGAGAAAAGCAAGACTCATGGTTTTCCAGCTGGTCTTTGT ACAAGTTTGGGAATTGGCGGTCACATAACAGGCGGAGCTTATGGTACTATGATGAGAAAA TATGGATTAGGAGTTGATAATGTGGTTGATGCAAGAATAGTTGATGCAAACGGCAGGATT CTTGATAGGCAGAGTATGGGAGAAGACTTGTTTTGGGCAATTAGAGGAGGTGGAGGAGCT AGTTTTGGTATCATACTTTCATGGAAGTTGAAGTTAGTACCTGTTCCATCGATTGTAACA GTTTTTACTGTCCCTAAAACACTTGATCAAAACGCGACAAACATTCTTTACAAATGGCAA CAAGTTGCAGCTGACAAGCTTGATGAAGATCTCTTCATCAGAGTCATCATAAACGTAGCT GCTGATAAAAAAGGCGAAAAGACTATTCAGACAGCTTATAATTCAATGTTCCTTGGTAGA GCAGACAGACTTTTACAAATAATGAATGATGTATTCCCTGAATTGGGATTGACACACAAG GACTGTACAGAAATGAGTTGGATTAAGTCGATTATGTATATTGCTGGTTACCCGAGTAAC ACCCCACCAGAAGTTCTCCTTCAAGGTAAGTCGTTGTTCAAGAATTACTTCAAAGCAAAG TCAGATTTCGTCAAAGAACCAATTCCAATAGATGGTCTTGAAGGGCTATGGAAAAGGCTA ATGGAAGAAGACTCACCATTAGTGATATGGAATCCATATGGTGGAATGATGGCTAAAATC TCAGAATCTGAAACCCCATTTCCTCATAGAAAAGGGATTATTTACATGATCCAATACTTA ACACTTTGGAATGATCCTTCTAAAGAATCAGCCACAAAACATTATGATTGGATTAGAAGA CTTTATAATTATATGACACCTTATGTTTCTATGTTCCCTAGAGAAGCTTATGTGAATTAT AGAGATCTTGATATAGGGATGAATAAGAATGAGAGTTCTAGTTTTATAGAAGCTAGTGTG TGGGGAAACAAGTATTACAAAGACAATTTCAATAGGCTAGTGAAAGTGAAGACTAAAGTG GATCCAGAGAACTTCTTCTTGCATGAACAAAGTATACCTACACTTCCTATTACAATGAAG GGGAAGAGTGTCAATCACTTTGAAATGTAA

Peptide Sequence

PEP ID	Solyc09g072660.3.1
PEP Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G813_THECC)
Sequence	MKSLNFSVMLSIFLIVSCSSSYALSDVSTSSSNGKLYECICQNSDYCVPFSTAFVTPTND SFNTILQSTAQNLRCLLPSVTKPQLIFTPMTESHVQAAVICSKQLGLQLRVRSGGHDYEG LSYMSDMESPFIILDLSKLRDIVVNTVDNYAWAQAGATVGEVYYRISEKSKTHGFPAGLC TSLGIGGHITGGAYGTMMRKYGLGVDNVVDARIVDANGRILDRQSMGEDLFWAIRGGGGA SFGIILSWKLKLVPVPSIVTVFTVPKTLDQNATNILYKWQQVAADKLDEDLFIRVIINVA ADKKGEKTIQTAYNSMFLGRADRLLQIMNDVFPELGLTHKDCTEMSWIKSIMYIAGYPSN TPPEVLLQGKSLFKNYFKAKSDFVKEPIPIDGLEGLWKRLMEEDSPLVIWNPYGGMMAKI SESETPFPHRKGIIYMIQYLTLWNDPSKESATKHYDWIRRLYNYMTPYVSMFPREAYVNY RDLDIGMNKNESSSFIEASVWGNKYYKDNFNRLVKVKTKVDPENFFLHEQSIPTLPITMK GKSVNHFEM*

Transcript Sequence

Transcript ID	Solyc09g072660.3.1
Transcript Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G813_THECC)
Sequence	ATTCTTTTTGTATAGTGAAAGGTATACTACTCAATTAATTATTCTAGTCATCAACCAGAC ACTAATTAAGAGTATATAAACCCCTCTAAGCTAATTCCAAAGCACATTGTAGTATCAGCT ATGAAATCCTTAAACTTCTCTGTTATGCTCTCAATATTTCTCATAGTCTCATGTTCGAGC TCGTATGCTCTTTCAGATGTTTCAACATCGTCATCTAATGGGAAGTTGTATGAATGTATT TGCCAGAATTCTGATTATTGTGTCCCTTTTTCCACAGCTTTCGTCACCCCAACAAATGAT TCGTTCAACACAATCCTACAATCTACTGCACAAAATCTCAGATGTTTACTTCCTTCTGTT ACTAAACCTCAGCTTATTTTCACACCAATGACAGAATCACATGTCCAGGCTGCAGTCATT TGCTCGAAACAGCTTGGCCTTCAGCTTAGAGTTAGAAGTGGAGGCCATGATTATGAAGGT CTTTCTTACATGTCTGATATGGAGTCTCCTTTCATCATTCTTGATCTATCAAAGCTTCGA GATATCGTGGTGAACACAGTGGACAACTATGCTTGGGCTCAGGCAGGGGCAACAGTTGGT GAAGTATATTATAGGATTTCAGAGAAAAGCAAGACTCATGGTTTTCCAGCTGGTCTTTGT ACAAGTTTGGGAATTGGCGGTCACATAACAGGCGGAGCTTATGGTACTATGATGAGAAAA TATGGATTAGGAGTTGATAATGTGGTTGATGCAAGAATAGTTGATGCAAACGGCAGGATT CTTGATAGGCAGAGTATGGGAGAAGACTTGTTTTGGGCAATTAGAGGAGGTGGAGGAGCT AGTTTTGGTATCATACTTTCATGGAAGTTGAAGTTAGTACCTGTTCCATCGATTGTAACA GTTTTTACTGTCCCTAAAACACTTGATCAAAACGCGACAAACATTCTTTACAAATGGCAA CAAGTTGCAGCTGACAAGCTTGATGAAGATCTCTTCATCAGAGTCATCATAAACGTAGCT GCTGATAAAAAAGGCGAAAAGACTATTCAGACAGCTTATAATTCAATGTTCCTTGGTAGA GCAGACAGACTTTTACAAATAATGAATGATGTATTCCCTGAATTGGGATTGACACACAAG GACTGTACAGAAATGAGTTGGATTAAGTCGATTATGTATATTGCTGGTTACCCGAGTAAC ACCCCACCAGAAGTTCTCCTTCAAGGTAAGTCGTTGTTCAAGAATTACTTCAAAGCAAAG TCAGATTTCGTCAAAGAACCAATTCCAATAGATGGTCTTGAAGGGCTATGGAAAAGGCTA ATGGAAGAAGACTCACCATTAGTGATATGGAATCCATATGGTGGAATGATGGCTAAAATC TCAGAATCTGAAACCCCATTTCCTCATAGAAAAGGGATTATTTACATGATCCAATACTTA ACACTTTGGAATGATCCTTCTAAAGAATCAGCCACAAAACATTATGATTGGATTAGAAGA CTTTATAATTATATGACACCTTATGTTTCTATGTTCCCTAGAGAAGCTTATGTGAATTAT AGAGATCTTGATATAGGGATGAATAAGAATGAGAGTTCTAGTTTTATAGAAGCTAGTGTG TGGGGAAACAAGTATTACAAAGACAATTTCAATAGGCTAGTGAAAGTGAAGACTAAAGTG GATCCAGAGAACTTCTTCTTGCATGAACAAAGTATACCTACACTTCCTATTACAATGAAG GGGAAGAGTGTCAATCACTTTGAAATGTAATATTATAAGTTCATTTTATCTTTGCAAAGT TGTAATCAAATGGTTTTGACAAACCATATATAGGGTAGAACCAATTGCCTTGTGTTTGTT TTGGAGTGTTTGAATTTTCTGTATAGATGGTGTAAAATTCTTAAAATGAATTTGTGTTCT ACAAAAAATATGATAGTTCGATGCACGAAGTTCATGATATATGCAATTAGAGAACTGAAC ATTTTGGGACAAGTTAATATCTCAAAAGATCACTCTACTATGGAAATAAAATCACTCAAG TTAACGTTCTAAAATCACTCAACTAAATTTATCATTAATAAAATATATATATCATGGGCA AAACAGATTCTTTCTTTATGTCATATACATAATATGGATCACATACACAAACAAACAAAC TCATTATGATGATTCTTCTCTCTGTTGTGGTAGGAGATATGT