Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g066300.2.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	ATGTTCATTCAGTTTCTTGTTTCATTCAAAAACCAGCAGAACAACAACAACACGAGTGTA ACACACTTAACTCCAACGGGTGCAGTTTCTGAAAACGGCTTCCCTATAATTGGCGTTGCG ATGTTAGGAATCATGGCAATAGGGTTCTTGCTAGTGAGTTACTACATCTTTGTGACAAAA TGCTGCATCAACTGGCAGCAATTTGACCCATTAAGACGCTTCTTCAATACGCGTCCACGC CAATACGAAGAGACTTATACACCATCAAGAGAAAGCAGAGGACTTGATGAATTGGTAATA AGAGAAATTCCAACTTATCCGTACAGCAGAAACAGAGTTGGTGAAACAAGTTTTAGAAGA TGTGTTGTTTGTTTGAATGAATTTAAAGAAGATGAAATGCTTAGACTTCTTCCTAAATGT AGCCATGCTTTCCATTTAGACTGCATTGATATCTGGCTTCAAAACAATGCTAGCTGTCCT CTTTGTAGAAGTAGCATTTCAGGTACAACCGCTAAACATCCAATCGATATGATTATCGCG CCAAATTCATCACCTCAAGATCCTCATATTCCACTTCTGAGAAGAAGAAGAAGCGAGGAA GATTTCGTGGTGATTGAATTGAGTGGTGAACTTGGAACAGAGGCGCAAAACTCTGTCAGC ACAAGCAGTGACTTTGAACAGAGGATTGATAAGTTGGATACAAGGAAGTATTCAATGATG GGAGATGAGTGTATAAATGTAAGAGATAAAGATGCTCTGTTTTCAGTTGAGCCAATAAGG AGATCGTTTTCGATGGATTCAGCAGCAGATCGACATGTTTACTTATCAGTGCAACAGATG ATACGTCATAATAGGCAGATGATCAGTGAGCTCAGAAACAATGGTGAAAGCAGTAGTAGA TCCATTCGAAAATCCATCTTTTCTTTTGGACATACAAGATCTAAGACATCAGTTTTACCT TTTGAATCTTAA

Peptide Sequence

PEP ID	Solyc09g066300.2.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	MFIQFLVSFKNQQNNNNTSVTHLTPTGAVSENGFPIIGVAMLGIMAIGFLLVSYYIFVTK CCINWQQFDPLRRFFNTRPRQYEETYTPSRESRGLDELVIREIPTYPYSRNRVGETSFRR CVVCLNEFKEDEMLRLLPKCSHAFHLDCIDIWLQNNASCPLCRSSISGTTAKHPIDMIIA PNSSPQDPHIPLLRRRRSEEDFVVIELSGELGTEAQNSVSTSSDFEQRIDKLDTRKYSMM GDECINVRDKDALFSVEPIRRSFSMDSAADRHVYLSVQQMIRHNRQMISELRNNGESSSR SIRKSIFSFGHTRSKTSVLPFES*

Transcript Sequence

Transcript ID	Solyc09g066300.2.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061EMD3_THECC)
Sequence	GCAGCAGCATCGCATAAACATATGTTCATTCAGTTTCTTGTTTCATTCAAAAACCAGCAG AACAACAACAACACGAGTGTAACACACTTAACTCCAACGGGTGCAGTTTCTGAAAACGGC TTCCCTATAATTGGCGTTGCGATGTTAGGAATCATGGCAATAGGGTTCTTGCTAGTGAGT TACTACATCTTTGTGACAAAATGCTGCATCAACTGGCAGCAATTTGACCCATTAAGACGC TTCTTCAATACGCGTCCACGCCAATACGAAGAGACTTATACACCATCAAGAGAAAGCAGA GGACTTGATGAATTGGTAATAAGAGAAATTCCAACTTATCCGTACAGCAGAAACAGAGTT GGTGAAACAAGTTTTAGAAGATGTGTTGTTTGTTTGAATGAATTTAAAGAAGATGAAATG CTTAGACTTCTTCCTAAATGTAGCCATGCTTTCCATTTAGACTGCATTGATATCTGGCTT CAAAACAATGCTAGCTGTCCTCTTTGTAGAAGTAGCATTTCAGGTACAACCGCTAAACAT CCAATCGATATGATTATCGCGCCAAATTCATCACCTCAAGATCCTCATATTCCACTTCTG AGAAGAAGAAGAAGCGAGGAAGATTTCGTGGTGATTGAATTGAGTGGTGAACTTGGAACA GAGGCGCAAAACTCTGTCAGCACAAGCAGTGACTTTGAACAGAGGATTGATAAGTTGGAT ACAAGGAAGTATTCAATGATGGGAGATGAGTGTATAAATGTAAGAGATAAAGATGCTCTG TTTTCAGTTGAGCCAATAAGGAGATCGTTTTCGATGGATTCAGCAGCAGATCGACATGTT TACTTATCAGTGCAACAGATGATACGTCATAATAGGCAGATGATCAGTGAGCTCAGAAAC AATGGTGAAAGCAGTAGTAGATCCATTCGAAAATCCATCTTTTCTTTTGGACATACAAGA TCTAAGACATCAGTTTTACCTTTTGAATCTTAA