Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g065990.3.1
CDS Infomation

E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** W9RBR4_9ROSA)
Sequence

ATGACGAATCAATTGGTGAAGGTGAAGAGAGATGTGATTGCGGCATGCATGACATGCCCT
CTTTGTCATAATCTCTTCAGAGATGCAACTACCATTTCCGAATGTCTTCATACGTTTTGC
AGGAAATGCATCTACAAGAAGCTGTCCGATGAAGAAACGGAACACTGTCCAATTTGCAAT
ATTGACTTAGGCTGTGTTCCTTTAGAGAAACTGAGGCCAGATCATAATCTGCAAGATGTG
AGAGCAAAGGTATTCCCTTATAAGAGGCGAAAGGTGAATGCACCTGAAATTGTGACTTCA
GTAGCGTTGCCAGTGAGGAGAAAGGAGAGATCACTCTCGTCACTTGTGGTCAGCACTCCA
AGAGTATCTTCACAAACTGGAATAACAGGAAGAAGAACAAAATCGGTGGCAAGAAAAGCA
TTATGTGGTTCCAACTTTTCAATTGAGAAATCTCTCAAGAATGAAGATGGTTCTGGAGAA
GATCAGCTGGATAGCTCTAGCTCACTTGAGACTTTGAACAAGTTCACTCAGAACATGAGG
CTGAATTCTTCCAGTGCTGAGCCTTCTAGTCACCCTACACCTGATAAAGAAACTGAAAAT
GGCAGTCAACAGTGGGAAGGCAAAGTTGATTTGTGGAAACCTTTAAATTGTTTGGTGGAA
GCAGCAAACAGGAGCAAATCTTCGAGGTTTACCTCAGACGGTTCTACCGCTAAGTCAGAA
GGTCGGCATTCCCATGACCGTGAGGGTCATGTCCGTAAAACTAAAGTCAAAGAACATGGA
CAGAAATCAAAGATCAAGGATGACAATAATAGTGATCCTGCTCCTCCAGAATTTGACAAA
CCTAAAAAGTCGCGTAGAATTCGCCAAAAGAAGGCATCATTTTATGGGGAGTTTGATATT
TCACCGCAAACTTTTCTGGATGCAACCACTGCCAGATGTGAAAAGAGAATCTATCCAATA
TGGTTTTCGTTGGTGGCCTCGGAAGACCAGGAGGGAGATGCACCCTTGCCACAGATTTCT
GCAAGTTACTTGAGAATAAAGGATGGCAATATTCCTGTTTGTTTCATCCAAAAATACCTG
ATGCGGAAGTTGGATCTTAAGAGCGAAGACGAGGTTGAGATTAGATGTATGGGACAATCA
ATCGTCCCCAGTTTACCACTGAACAGTTTGGTTGATATGTGGCTTCAAACTACCCCATCT
GAAAGAATACCAGCAATTATTGGTTCATCGGCAAAGGATTTTGTTATGGGACTAGCTTAT
GCTCGAAAGTCCCCAGGCACTGCGGCATCTTGA

Peptide Sequence

PEP ID

Solyc09g065990.3.1
PEP Infomation

E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** W9RBR4_9ROSA)
Sequence

MTNQLVKVKRDVIAACMTCPLCHNLFRDATTISECLHTFCRKCIYKKLSDEETEHCPICN
IDLGCVPLEKLRPDHNLQDVRAKVFPYKRRKVNAPEIVTSVALPVRRKERSLSSLVVSTP
RVSSQTGITGRRTKSVARKALCGSNFSIEKSLKNEDGSGEDQLDSSSSLETLNKFTQNMR
LNSSSAEPSSHPTPDKETENGSQQWEGKVDLWKPLNCLVEAANRSKSSRFTSDGSTAKSE
GRHSHDREGHVRKTKVKEHGQKSKIKDDNNSDPAPPEFDKPKKSRRIRQKKASFYGEFDI
SPQTFLDATTARCEKRIYPIWFSLVASEDQEGDAPLPQISASYLRIKDGNIPVCFIQKYL
MRKLDLKSEDEVEIRCMGQSIVPSLPLNSLVDMWLQTTPSERIPAIIGSSAKDFVMGLAY
ARKSPGTAAS*

Transcript Sequence

Transcript ID

Solyc09g065990.3.1
Transcript Infomation

E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** W9RBR4_9ROSA)
Sequence

ATAGGAGCGAGATGAATTAACAATAGCAAATTCAATGATTAGAGTTAATATTAAAGTATT
GGGTTTTGTTCATGAGCTATTTCTCCTCACCCCTACCCACCCACCAACCGAAAACACCGT
CGATTTCGACTCTACATAGCAATAAGAGATCATTCAACAACTTCACTTTAACCCTCAAAA
TCTAAATCCAAACCAAAATTTCATCCAAATCTCATCAGATTCAACACTCGCAAATCTGCT
GTCTATCGTTTTCTGGGTTTAATGCAGATGATAAAAGTGAGTGATGAATGAACGTAAAAC
TCCATGTGTGTATGAAGCTGTTTCTAGCATGCACCGCTTCACTACGTGTTATTGAGCTGA
TAATAGAGAGGTGGATAATATATTATGACGAATCAATTGGTGAAGGTGAAGAGAGATGTG
ATTGCGGCATGCATGACATGCCCTCTTTGTCATAATCTCTTCAGAGATGCAACTACCATT
TCCGAATGTCTTCATACGTTTTGCAGGAAATGCATCTACAAGAAGCTGTCCGATGAAGAA
ACGGAACACTGTCCAATTTGCAATATTGACTTAGGCTGTGTTCCTTTAGAGAAACTGAGG
CCAGATCATAATCTGCAAGATGTGAGAGCAAAGGTATTCCCTTATAAGAGGCGAAAGGTG
AATGCACCTGAAATTGTGACTTCAGTAGCGTTGCCAGTGAGGAGAAAGGAGAGATCACTC
TCGTCACTTGTGGTCAGCACTCCAAGAGTATCTTCACAAACTGGAATAACAGGAAGAAGA
ACAAAATCGGTGGCAAGAAAAGCATTATGTGGTTCCAACTTTTCAATTGAGAAATCTCTC
AAGAATGAAGATGGTTCTGGAGAAGATCAGCTGGATAGCTCTAGCTCACTTGAGACTTTG
AACAAGTTCACTCAGAACATGAGGCTGAATTCTTCCAGTGCTGAGCCTTCTAGTCACCCT
ACACCTGATAAAGAAACTGAAAATGGCAGTCAACAGTGGGAAGGCAAAGTTGATTTGTGG
AAACCTTTAAATTGTTTGGTGGAAGCAGCAAACAGGAGCAAATCTTCGAGGTTTACCTCA
GACGGTTCTACCGCTAAGTCAGAAGGTCGGCATTCCCATGACCGTGAGGGTCATGTCCGT
AAAACTAAAGTCAAAGAACATGGACAGAAATCAAAGATCAAGGATGACAATAATAGTGAT
CCTGCTCCTCCAGAATTTGACAAACCTAAAAAGTCGCGTAGAATTCGCCAAAAGAAGGCA
TCATTTTATGGGGAGTTTGATATTTCACCGCAAACTTTTCTGGATGCAACCACTGCCAGA
TGTGAAAAGAGAATCTATCCAATATGGTTTTCGTTGGTGGCCTCGGAAGACCAGGAGGGA
GATGCACCCTTGCCACAGATTTCTGCAAGTTACTTGAGAATAAAGGATGGCAATATTCCT
GTTTGTTTCATCCAAAAATACCTGATGCGGAAGTTGGATCTTAAGAGCGAAGACGAGGTT
GAGATTAGATGTATGGGACAATCAATCGTCCCCAGTTTACCACTGAACAGTTTGGTTGAT
ATGTGGCTTCAAACTACCCCATCTGAAAGAATACCAGCAATTATTGGTTCATCGGCAAAG
GATTTTGTTATGGGACTAGCTTATGCTCGAAAGTCCCCAGGCACTGCGGCATCTTGAGTT
ATTATCACTGCATTTCTATACTTGATAAACTACATGAGAGCTAATCATATGTTGAAGTAG
CAGAGCGGAATTGTTATAAGAACCATTGTGCCTCATCATATTGTGAGTTGTAGACTAGTA
GGTTGTTTTCAACTGCTGCGACTCAGCAGTAATCGAGGAACTAGATGACGAGGAAGATGA
TACTGAAATCCAAGTTGGGCCATTCTGGCCACCATGCTTTCAAGTTCACTCTCTCTCTCT
CTGTCTCTGCAATGTGTTGTATGGTTGTACACTACCTGAGTGAATCTTGATAATGTTTTT
TCATTCATGTCTTTCATATCTCAAAATCTTAATATAATATATATATATATATATATACAC
AATTTAATTTATTTTTCCAAGGTACTAGTATTTCACCTGAAGTTTGACGTTACATTTAAG
CAACATTTCTATCTGACTGTAGAATGATGAATTGTACTGTTGTTATTCTTTTATGTCCTA
TTCTAAAGATGTCCCCACCCAACCTCTCCAGGTAATCAAACTTCCCGCCCTTTGTTGTTA
TTGTTTTACAAATTGATTCATCAATCAAGCGCCTATGATTTTCGTCAATGAAATAAAGTG
GCAATATTGTGTTTGAACAATGTTTTACACAAAATCAAATTGAATTCATATGAAACAATG
TATTATTGATTGATTGGGTGAAACCTAATTAATGCATAAATGAGATTACAGAAGCAGTAG
CTTTGCATTTGCTATTTTCCAGATCTGCAGGCTCCAAAATCACACAGATCTGTAGGCTTC
AAAATCACACATAGGTACCAACAAAAGAGTGCAATCCACCATCAGCGGCATCTTCTTCTT
CCAGAAACAAATTCTCTGTAATTCTAAAAGTTGCATGCAAAAATATCAACACAATCCCTA
CGACAATCGACACCAACACATTCAACCAAACATGAGTGAGCACCAAGCTCACCACTGTAA
CAACTCCGAGAACAACCAGAACAATTCTATCATCAATCGTACGATTAAAAACCATCAACG
GTTCGTCGCGATGGAAGTAGAGGAAATACCAACCTACCGACACGATTAAGAACACAATCA
TTGAAATTGGATGCCATAAAATGCTTAAGAAGAGTACAACCAGTACAATCATCGCATAGT
TGACCCGAAAGTAGCTCAGATTTCGCTTCACCCGAGATGCGAAATCGCTGACGGAAATAG
GTAGGGTATAGGAAGACGGATGGGTCAATAGCTCTCTCCATGGACGACGACGAGCATAGA
CGGTAAGCATGCCGGATCTAGCCCGACTGAAAGAGAAGTCATAAGATGGACGCATGATTA
TTCAATTAGGGTTGCACTGTGATTCACGTTCAAAAGTTGAAACCTAGAAGAAGGGGATGG
AATCTCTAATTGCACTTTTAACAACCAAAAAATTATCTTTTTTTTCATATATTATTAATT
ATTTTTTTTCAAGATTTATTTTTTTTAACAATAAATTGTAAATATTACTATACTAACAAA
AAATGAATTACATCTA