Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g065630.3.1
CDS Infomation

BIG SEEDS 2 (AHRD V3.3 *** K4CUI9_SOLLC)
Sequence

ATGTCGCTGGAACAAACTGTTTACAAGTCTCCTCTGGACAAACCGCTTTACCTACTTACC
GATGACGACATTTCTCAGCTCACTCGCGAAGATTGCCGACGTTTTCTTAAAGCTAAAGGA
ATGAGAAAGCCGTCATGGAATAAATCACAGGCGATTCAGCAGGTGATTTCACTGAAGGCG
TTGTTTGAGACGACGCCGGAATCCGACACCGGTCAGCGGAAAAAGCGTCACATTCCTCGC
CCGGACACTAGTTTACAGCGAGTCCAGAAAGAAACGAGTATCGATGCAGAATTTGCTGAA
TCGGCTGAAGAAACGGTGCCGTACGGTAGAAAACCTCCCAATAAACCTGATCTTTCCGGC
GACAAAGCTGCAAGTGCTGTTGCCGTTGTCAATAACTTAGCTCCTTCTAGAACCACAGAT
TCAGGAAATGCATCATCAGGTCAATTGACAATCTTCTATTGTGGCAAGGTGAATGTGTAT
GATGATGTACCTGCTGAAAAGGCAGAAGCAATCATGCATCTTGCTGCAAGCCCACTCTTT
GTCCCTTCAGAAACTCCATTGGATGCTAACAGAGCAGCTCAACATTCCGAATGCCATTTG
CAAGCTGCAAATGTTAAACTGGGTCAAGATTCTCCTATGGTGTTCATGCCAACCATGCAA
ACAGGGAAAATAACTGAAGTTACTCGCCTGCATTTGGAGGAAAGCAACACTTCCTATGAA
GACAATCCTGAAGCAGTGAACCACGTAAGCAGGAAAGCATTACTGGAAAGATATCGTGAG
AAGCGGAAAGACAGGTTCAAGAGAAAGATGGGAATGCCTTCATCTGCTAGCTTGGACATC
TATTTGAACCATCGAACCATAAATCATACCCAAAGCGAGCTCTCAAGTAGGAGCAACACT
TGTTCCCCGCCCGCAATTAGATTATCTGCTGCGCCTGCTCCAAGTGGTTCAATGGATAAC
ATTCTCCAAATGGATGCCAATGCTTCTGGTTTTCTCGACGACAAAGATGGTAAAGAGTGA

Peptide Sequence

PEP ID

Solyc09g065630.3.1
PEP Infomation

BIG SEEDS 2 (AHRD V3.3 *** K4CUI9_SOLLC)
Sequence

MSLEQTVYKSPLDKPLYLLTDDDISQLTREDCRRFLKAKGMRKPSWNKSQAIQQVISLKA
LFETTPESDTGQRKKRHIPRPDTSLQRVQKETSIDAEFAESAEETVPYGRKPPNKPDLSG
DKAASAVAVVNNLAPSRTTDSGNASSGQLTIFYCGKVNVYDDVPAEKAEAIMHLAASPLF
VPSETPLDANRAAQHSECHLQAANVKLGQDSPMVFMPTMQTGKITEVTRLHLEESNTSYE
DNPEAVNHVSRKALLERYREKRKDRFKRKMGMPSSASLDIYLNHRTINHTQSELSSRSNT
CSPPAIRLSAAPAPSGSMDNILQMDANASGFLDDKDGKE*

Transcript Sequence

Transcript ID

Solyc09g065630.3.1
Transcript Infomation

BIG SEEDS 2 (AHRD V3.3 *** K4CUI9_SOLLC)
Sequence

CTAATATTATTGATACTCAATATGATATAACTATATTTAGATATGCACATTTACCAATAT
CTAATAGCAAATGCAAATATAAGTTAAGTGTATATGTGCATCCATATACTATATTTCTCT
GGCCTTTGTTTTCCGAAAAAAAATATAAAATTTGTGAAAAACGATTTTAAAGGCAAGTAT
ATAGGTCAGACCAAATTTTTTCTCTTTTAAAATAAATATTAAGGCCATGATCAATATGAT
CTTTTAAACAAAACGAAATAATATGCAAGTGGGAAGGAGGAGGTTTCAAGACTTCTTTCG
ATAAGACGTGATATCTACCTCAATCAATCTACAATCAAAGATAAATCAATTCAAGAAGGA
AGAAAACGTAAAATTTTAATCCTAAATTATCGAAGAGGTAAAAAGAATAAGAAATCCTCC
AACTAATACCTAACATTAATTTAATTTCACAAAGGAGGAGCTACACTCAAAAGAGTGTTT
TAATCAATGATCAAAAGCTATCAAATGAAAATAACTTGGGTAAATATTTTATGGAGCCTT
TACAAGCTTAATCCCAAACATGAACTTAGCAAAAACCCATAAACGACTAACTCACAATGC
GACATTGTAGTCACAAATGGGGTATACAATCGCATATAGGGATCACAAGTGTTCCATCGA
CTTGCATTGCATATGTGAGCGCATATGGTTGCATTGCTATCATCTATCATCGATAGCTTG
AACATCTGGACACACAAGTCTTTAACTTTCTATCTACGTTATTTTTTATAATTATTTTAA
GTACCGCCAATATATGAGTCCATCTTCTCAAACACGAATTGATTAAATGAATAGCTTAAA
AATGTACATTTGAGATACCTTAAAACATCTTCAATTTGATAAAAGTGTACCATGTTACAT
ATTAATTACGAGAACTTTTCAATATCATATTAATATTTTTTTTAGAACATTTATTTTTTG
TCCAATATAGCTAGGATACGAGTGAGAGATGATATTATTTTTGAACCTAGTCAACACACA
TTAAAATGAGTTTGACATTAGTAGGTTTGTGAGAGGCAAATACTGTGTGATAGGGAAAGA
AATAGTAGGGCGTGAAGTAGAGAGGTGGTAAAGAGGGGGGCCCCTCGGCCTCTAAAGATT
AGATAGGGGGGCTAACTTTTTCAATAATGACATAGCTGATTACGTGGCAACCTGGGGTTG
CAGCCTTGCCTCCCCAAAATGGGTTACGGCCAAAAAAGTATAAAGCAACACACTAAAGCG
GCGACGCTGCGGCCATTTTTTCCCCCAATCCTCCACTCTCTCACTCACTGCTAAACACGT
TTCTTCTGTTTCAACTTCTCCGACGAACCAAATTGTACCGATACCCATCGGAATTTCACA
TCATGTCGCTGGAACAAACTGTTTACAAGTCTCCTCTGGACAAACCGCTTTACCTACTTA
CCGATGACGACATTTCTCAGCTCACTCGCGAAGATTGCCGACGTTTTCTTAAAGCTAAAG
GAATGAGAAAGCCGTCATGGAATAAATCACAGGCGATTCAGCAGGTGATTTCACTGAAGG
CGTTGTTTGAGACGACGCCGGAATCCGACACCGGTCAGCGGAAAAAGCGTCACATTCCTC
GCCCGGACACTAGTTTACAGCGAGTCCAGAAAGAAACGAGTATCGATGCAGAATTTGCTG
AATCGGCTGAAGAAACGGTGCCGTACGGTAGAAAACCTCCCAATAAACCTGATCTTTCCG
GCGACAAAGCTGCAAGTGCTGTTGCCGTTGTCAATAACTTAGCTCCTTCTAGAACCACAG
ATTCAGGAAATGCATCATCAGGTCAATTGACAATCTTCTATTGTGGCAAGGTGAATGTGT
ATGATGATGTACCTGCTGAAAAGGCAGAAGCAATCATGCATCTTGCTGCAAGCCCACTCT
TTGTCCCTTCAGAAACTCCATTGGATGCTAACAGAGCAGCTCAACATTCCGAATGCCATT
TGCAAGCTGCAAATGTTAAACTGGGTCAAGATTCTCCTATGGTGTTCATGCCAACCATGC
AAACAGGGAAAATAACTGAAGTTACTCGCCTGCATTTGGAGGAAAGCAACACTTCCTATG
AAGACAATCCTGAAGCAGTGAACCACGTAAGCAGGAAAGCATTACTGGAAAGATATCGTG
AGAAGCGGAAAGACAGGTTCAAGAGAAAGATGGGAATGCCTTCATCTGCTAGCTTGGACA
TCTATTTGAACCATCGAACCATAAATCATACCCAAAGCGAGCTCTCAAGTAGGAGCAACA
CTTGTTCCCCGCCCGCAATTAGATTATCTGCTGCGCCTGCTCCAAGTGGTTCAATGGATA
ACATTCTCCAAATGGATGCCAATGCTTCTGGTTTTCTCGACGACAAAGATGGTAAAGAGT
GAAAACTGGGATGGCGAGGAACACTCTTGCTTTCTAATTTGTTTTCATGCGCCAGAAAGT
CTGGGAGGTAACATCCTGTTCCAGCCTCTGCCTAGTTGAATGATGAGGAAAGAGGTAGGT
TGTTCCTTGTGGATCTGTGTTCAGAAGCAGTTTGTATTTAGGCTGTCCTCATTCCTCAGT
TAAATTAAGAGAAAATTAGTCAGGAATAGTCCTCTTGTCATGCAATGTTTTCTGCTTTCA
GAATCTTTTTGAAAGCCGACAGTCCTCAATAGTCCCACTTTAGTGTAGAATTTTAGGCAG
TTGCATTTTTCCCTTTTGCTGGAACTGGATCTAACGTGGAACGCTGTTGTAATTAGTCTC
ACTACTTTCCACTCTAACAAGACAGAAGATTTTGGCTGAACGGTGGAAGTACTTGGGATA
CCAAGGCATGCTCTTGTTTTATTTGGACTGATTTTTAGGAAAAATTTAAATGCTTGACTT
ACTAAAAATGTTTTAAGGTTGGTTGGTTAGTACTCCCTCCGTCCATCTTTACTTTTACAA
TATTGACTTAG