Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g065590.3.1

CDS Infomation

auxin canalization protein (DUF828) (AHRD V3.3 *** AT3G22810.1)

Sequence

ATGGATAATAGATGGTCAGAAAAGAACCTGAATATGAATCTTCCAGAAAGTCCAAAAGCA
CCAATGGAGTTTTTGTCAAGATCATGGAGTGCCTCTGCTTTGCAAGTTTGCAAGGCATTA
ACAACAACTTCTTCATTATCATCATCCTCATCTCTTCCTACGAAGACGAATAATAATAAT
AATAGTGTTGTTGTTACTATACCAGAGAACATTATCTCTGTTGTTGAGGAAGAAGATTCT
GCTAATAAGCTTGCTGGAAACACATTCTCTTTTGCTTCCTCTGCTACTTCACAACTTGTT
CTTGATCGCATTATGTCTCAATCTATGCATAATGGGCAGGAAATATCACCATTAACATCA
GGAAGATTATCTCATAGTAGTGGGCCTTTGAATGGTTCTCTGACTGAAGAAACTGATAGT
CCTCCAGTCTCACCTTCTGAAGAATTTGAAGATGTTGTTAAGTATTTGAAAGCAAACAGC
ACTCTGCAACCATTATTTACAAATGTAAGAACAGGATACACTGGATCAGCTGTTGGGTTA
GCACCCAACACGCCTGGTGGTAAGACAGTTGGCAGATGGTTAAAAGAAAGGAGAGAGAAA
AAGAAAGAAGAAAGTAGGGCCCAAAATGCCCAACTTCATGCTGTTGTTTCAGTGGCTGGA
GTTGCTGCTTCGGTGGCCGCAATTGCTGCGGCCACCGCATCAGCTTCGTCCACCGCCAAA
GATGAGCAAATGGCGAAGACTGATGCTGCTGTCGCTTCGGCAGCCATGCTGATTGCCGCG
CAGTGCGTGGAGGCTGCCGAAGTTATGGGAGCTGATCGGGACCATCTCATGTCCGCGATC
AGCTCTGCTGTTAATGTTCGATCTCATGGAGATATTTCAACTCTTACTGCTGCTGCTGCT
ACAGCATTGCGAGGGGCAGCAACATTAAAAGCAAGAGCATTGAAGGAAGTATGGAACATT
GCAGCAGTAATTCCAATAGAGAAGGGAATAGGTGGAGGCACAGGGCGAAACAACGACCAA
AATCACAGCAACAACAATAATAATTATTGTGAGGGACTTGACATTGAAGAGAACTTTTTG
GGGGTTTGTAATCAAGAATTACTTGCTCGAGGACGTGAGCTTCTCAAAAGAACTCGTAAT
GGTGATCTACACTGGAAAATTGTTTCTGTGTACCTTCATCGTAGCGGAGAGGTGATGCTG
AAAATGAAAAGCAAACATGTTGGAAAAACTATTACCAAGAAAAAGAAAAATGTAGTAACA
GAAGTTTACAAAGACGTACCAGCATGGCCAGGGAGGCATCTATTTGAGGATGGCGAAAAG
CGTCGATATTTCGGATTGAAGACAGAAATACGCGGTGTTGTTGAGTTTGAATGCAAAAAT
CAAAGAGAATATGAGATGTGGACTCAAGGAGTTTCAAGACTTTTATCTATGGTGGCTGAA
AGGAAGAAGAGATTTCAACACTAA

Peptide Sequence

PEP ID

Solyc09g065590.3.1

PEP Infomation

auxin canalization protein (DUF828) (AHRD V3.3 *** AT3G22810.1)

Sequence

MDNRWSEKNLNMNLPESPKAPMEFLSRSWSASALQVCKALTTTSSLSSSSSLPTKTNNNN
NSVVVTIPENIISVVEEEDSANKLAGNTFSFASSATSQLVLDRIMSQSMHNGQEISPLTS
GRLSHSSGPLNGSLTEETDSPPVSPSEEFEDVVKYLKANSTLQPLFTNVRTGYTGSAVGL
APNTPGGKTVGRWLKERREKKKEESRAQNAQLHAVVSVAGVAASVAAIAAATASASSTAK
DEQMAKTDAAVASAAMLIAAQCVEAAEVMGADRDHLMSAISSAVNVRSHGDISTLTAAAA
TALRGAATLKARALKEVWNIAAVIPIEKGIGGGTGRNNDQNHSNNNNNYCEGLDIEENFL
GVCNQELLARGRELLKRTRNGDLHWKIVSVYLHRSGEVMLKMKSKHVGKTITKKKKNVVT
EVYKDVPAWPGRHLFEDGEKRRYFGLKTEIRGVVEFECKNQREYEMWTQGVSRLLSMVAE
RKKRFQH*

Transcript Sequence

Transcript ID

Solyc09g065590.3.1

Transcript Infomation

auxin canalization protein (DUF828) (AHRD V3.3 *** AT3G22810.1)

Sequence

AAGACCCCTGCACTCTTTTTCAAAAGCAATTCACACTCTTACTAGTTGTTACTACTAAAA
ATTTGCTCCTATTAGTGTTTTTTTTTCTTCTTCTTGATGGATAATAGATGGTCAGAAAAG
AACCTGAATATGAATCTTCCAGAAAGTCCAAAAGCACCAATGGAGTTTTTGTCAAGATCA
TGGAGTGCCTCTGCTTTGCAAGTTTGCAAGGCATTAACAACAACTTCTTCATTATCATCA
TCCTCATCTCTTCCTACGAAGACGAATAATAATAATAATAGTGTTGTTGTTACTATACCA
GAGAACATTATCTCTGTTGTTGAGGAAGAAGATTCTGCTAATAAGCTTGCTGGAAACACA
TTCTCTTTTGCTTCCTCTGCTACTTCACAACTTGTTCTTGATCGCATTATGTCTCAATCT
ATGCATAATGGGCAGGAAATATCACCATTAACATCAGGAAGATTATCTCATAGTAGTGGG
CCTTTGAATGGTTCTCTGACTGAAGAAACTGATAGTCCTCCAGTCTCACCTTCTGAAGAA
TTTGAAGATGTTGTTAAGTATTTGAAAGCAAACAGCACTCTGCAACCATTATTTACAAAT
GTAAGAACAGGATACACTGGATCAGCTGTTGGGTTAGCACCCAACACGCCTGGTGGTAAG
ACAGTTGGCAGATGGTTAAAAGAAAGGAGAGAGAAAAAGAAAGAAGAAAGTAGGGCCCAA
AATGCCCAACTTCATGCTGTTGTTTCAGTGGCTGGAGTTGCTGCTTCGGTGGCCGCAATT
GCTGCGGCCACCGCATCAGCTTCGTCCACCGCCAAAGATGAGCAAATGGCGAAGACTGAT
GCTGCTGTCGCTTCGGCAGCCATGCTGATTGCCGCGCAGTGCGTGGAGGCTGCCGAAGTT
ATGGGAGCTGATCGGGACCATCTCATGTCCGCGATCAGCTCTGCTGTTAATGTTCGATCT
CATGGAGATATTTCAACTCTTACTGCTGCTGCTGCTACAGCATTGCGAGGGGCAGCAACA
TTAAAAGCAAGAGCATTGAAGGAAGTATGGAACATTGCAGCAGTAATTCCAATAGAGAAG
GGAATAGGTGGAGGCACAGGGCGAAACAACGACCAAAATCACAGCAACAACAATAATAAT
TATTGTGAGGGACTTGACATTGAAGAGAACTTTTTGGGGGTTTGTAATCAAGAATTACTT
GCTCGAGGACGTGAGCTTCTCAAAAGAACTCGTAATGGTGATCTACACTGGAAAATTGTT
TCTGTGTACCTTCATCGTAGCGGAGAGGTGATGCTGAAAATGAAAAGCAAACATGTTGGA
AAAACTATTACCAAGAAAAAGAAAAATGTAGTAACAGAAGTTTACAAAGACGTACCAGCA
TGGCCAGGGAGGCATCTATTTGAGGATGGCGAAAAGCGTCGATATTTCGGATTGAAGACA
GAAATACGCGGTGTTGTTGAGTTTGAATGCAAAAATCAAAGAGAATATGAGATGTGGACT
CAAGGAGTTTCAAGACTTTTATCTATGGTGGCTGAAAGGAAGAAGAGATTTCAACACTAA
TTCACCAATTAATTATGCGCCTAAGATATTAGT