Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g065240.3.1
CDS Infomation

Patatin (AHRD V3.3 *** K4CUF1_SOLLC)
Sequence

ATGGACTTCAGTAAGATATCGCTCGAAATCTTCTCAAAGCTCGAGCAGAAATGGTTGTAT
CACTACGAAGGGAAGAAAACTCGGGTTCTCAGTATTGATGGTGGTGGAACTACAGGCATT
GTTTCCGGGGCTGCATTGATCCATCTAGAAAACCAGATCTGTGCTAAAACGGGTGATCCT
CACGTTAGAATTTCTGATTTCTTCGACATTGTTGTGGGTACTGGTATAGGTGCTATCTAC
GCTGCAATGCTTGTGGTTGATGGAGGTGACGGCCGTCCGTTGTTCACAGCGAAGGATGCC
GTGAAGTTTGTGAAGGAAAATCAGTCGAGGCTGTTTAAGGCTAAGAAAGTCGGTGTTCTC
CGTCGGAAGAAGAGGTTTTCAGGGAACAGCATGGAGAAGGTGTTGAAGGAAGTGTTTAGA
AGAGAAGACGGCAAAGCGTTAACTTTGAGGGACACGTGTAAGCCTTTACTTGTACCGTGC
TTTGACCTCAACAGTGCTGCGCCTTTCGTCTTCTCCAGAGCTGATGCTATCGAGTCCTTC
AGTTACGACTTTGATCTATGGAAAGTATGCCGTGCCACGTCAGCAAATCCGTCCATGTTC
AAGCCGTTTAATCTCAAGTCAGTGGACGGAAAAACCTCTTGCCTCGCCGTTGACGGCGGT
CTCGTCATGAACAATCCCGCTGCTGCAGCCGTCACTCACGTTTTGCACAACAAACGAGAT
TTTCCTTCCGTCACCGGCGTCGATGACCTATTGGTTCTCTCTCTAGGTAACGGTCCGTTA
AACTCAACGGCAAACTTAAAAATGAGAAATGATGGCTACTGCTCTCCATTATCCGTCGTC
GGAATCGTCTTCGACGGCGTTTCTGAAACCGTTGACCAAATGCTCGGAAACGCCTTCTGC
TGGAACCCCAATGACTACGTTAGAGTTCAGGCGACCGGGTATGCAAGTGGAGGAGTGGGA
CCAGGAGTTGAGGAGGCGTTAGAAGAAAGAGGAGTGGAGTCATTGCCATTTGGCGGTAAG
CGGTTACTAACGGAGACTAACGGACAGAGAATCGGGGGTTTGGTGCAACGCCTTGTTGCT
ACCGGAAGAAGTAGTGTGCCGCCAAGTCCATGCAAGGATGTTGCCGTTAGTCCTCTAAGA
AACGGACGTTAA

Peptide Sequence

PEP ID

Solyc09g065240.3.1
PEP Infomation

Patatin (AHRD V3.3 *** K4CUF1_SOLLC)
Sequence

MDFSKISLEIFSKLEQKWLYHYEGKKTRVLSIDGGGTTGIVSGAALIHLENQICAKTGDP
HVRISDFFDIVVGTGIGAIYAAMLVVDGGDGRPLFTAKDAVKFVKENQSRLFKAKKVGVL
RRKKRFSGNSMEKVLKEVFRREDGKALTLRDTCKPLLVPCFDLNSAAPFVFSRADAIESF
SYDFDLWKVCRATSANPSMFKPFNLKSVDGKTSCLAVDGGLVMNNPAAAAVTHVLHNKRD
FPSVTGVDDLLVLSLGNGPLNSTANLKMRNDGYCSPLSVVGIVFDGVSETVDQMLGNAFC
WNPNDYVRVQATGYASGGVGPGVEEALEERGVESLPFGGKRLLTETNGQRIGGLVQRLVA
TGRSSVPPSPCKDVAVSPLRNGR*

Transcript Sequence

Transcript ID

Solyc09g065240.3.1
Transcript Infomation

Patatin (AHRD V3.3 *** K4CUF1_SOLLC)
Sequence

GTGTCCTTTACCATTGATTGTTTTAACTCTCCATCACTCTCTCTCTGTATTTGGCAGACA
GTGGGGAGAGCATACTGCACAGATTATATTTCTGTCAGTCACAACAAATTAACTAAATTA
TAAAAAAAAAGGAATACTCACAGCAATTTCTCCATCGCAATTAATGCTTCTCCGCAGAAA
ATCGTGAGCTTTTTTCCTCTTTCACGTTTATCCATCACTTCCAGCATCGATCTGATTTGC
TTCTTTGGCTGTTTGTTCAGTGATGGACTTCAGTAAGATATCGCTCGAAATCTTCTCAAA
GCTCGAGCAGAAATGGTTGTATCACTACGAAGGGAAGAAAACTCGGGTTCTCAGTATTGA
TGGTGGTGGAACTACAGGCATTGTTTCCGGGGCTGCATTGATCCATCTAGAAAACCAGAT
CTGTGCTAAAACGGGTGATCCTCACGTTAGAATTTCTGATTTCTTCGACATTGTTGTGGG
TACTGGTATAGGTGCTATCTACGCTGCAATGCTTGTGGTTGATGGAGGTGACGGCCGTCC
GTTGTTCACAGCGAAGGATGCCGTGAAGTTTGTGAAGGAAAATCAGTCGAGGCTGTTTAA
GGCTAAGAAAGTCGGTGTTCTCCGTCGGAAGAAGAGGTTTTCAGGGAACAGCATGGAGAA
GGTGTTGAAGGAAGTGTTTAGAAGAGAAGACGGCAAAGCGTTAACTTTGAGGGACACGTG
TAAGCCTTTACTTGTACCGTGCTTTGACCTCAACAGTGCTGCGCCTTTCGTCTTCTCCAG
AGCTGATGCTATCGAGTCCTTCAGTTACGACTTTGATCTATGGAAAGTATGCCGTGCCAC
GTCAGCAAATCCGTCCATGTTCAAGCCGTTTAATCTCAAGTCAGTGGACGGAAAAACCTC
TTGCCTCGCCGTTGACGGCGGTCTCGTCATGAACAATCCCGCTGCTGCAGCCGTCACTCA
CGTTTTGCACAACAAACGAGATTTTCCTTCCGTCACCGGCGTCGATGACCTATTGGTTCT
CTCTCTAGGTAACGGTCCGTTAAACTCAACGGCAAACTTAAAAATGAGAAATGATGGCTA
CTGCTCTCCATTATCCGTCGTCGGAATCGTCTTCGACGGCGTTTCTGAAACCGTTGACCA
AATGCTCGGAAACGCCTTCTGCTGGAACCCCAATGACTACGTTAGAGTTCAGGCGACCGG
GTATGCAAGTGGAGGAGTGGGACCAGGAGTTGAGGAGGCGTTAGAAGAAAGAGGAGTGGA
GTCATTGCCATTTGGCGGTAAGCGGTTACTAACGGAGACTAACGGACAGAGAATCGGGGG
TTTGGTGCAACGCCTTGTTGCTACCGGAAGAAGTAGTGTGCCGCCAAGTCCATGCAAGGA
TGTTGCCGTTAGTCCTCTAAGAAACGGACGTTAAGTTAAATTCTCCTTTCTTTTTGTTCA
TTTTGTACTAGTAATACTTATTTGTCAGTTTTACGACTTTTAACTGTCTAGTACTACTAC
TTGTGGTACCCAATTAATTAATCCATATAAATGTTTACATCTTTAAAATCAAAATGAGTT
TGGAGTTTTATTCGGCTGTTTAATTGCCTGAAATCCAGTGTACTAAAATAGGGAGTAAAA
AGAAAGCCAAATTTGTTATTAAATGACTTTAAAAGTAATGGAAATA