Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g064530.3.1
CDS Infomation

auxin-regulated IAA12
Sequence

ATGAGAGGTACTCTTGGTTTAATGGGTTTTGGAGGAGTTACTTATGGGGTTTCAGTTGAT
GGCTCAATTTGTACTCTGTCAAAGGAAGATAATAATGGGGTGTTGCTATCATCTGAGGCT
TCTTCATCATACCCTGATGAGACTCAACTTGAATTGGGTCTTGGACTGAGTCTTGGGGCT
TCTGCTGATGTTGCCCTTCCTAAGGCTAAAACTGGTGCAAGGGGTGGTTATGCTAAAATC
TTGACACCCAAAAAAGATTTCCCTTCTTTGGGTTCTAATTCATCATCTTCATGTTCATCT
TCTTCTGTTATTAAACCGAATAATGCTTCTTGTGGCACTAAGAGAAACGCTGATTCTATT
TCTCCTCCTCGTTCGAGTGTCAGTCAGGTTGTTGGATGGCCTCCTATAAGAACTTATAGG
ATGAACACCCTGGTTAACCAGACAAAACTACCACCCCCAGAAGAATTTTCTGTGACAAAC
GAGAAATGCAAAAGTAAAAATACTATCGCTAATGCTGGGAGCAGCAAGATCAACAACTTT
GCAAAGGAAAAAGGGCTCGTCAAGGCTTCTCTATTTGTGAAGGTCAATATGGATGGAGTT
ACAATTGGAAGGAAGGTAGATCTGAATGCACATAATAGCTATGAGAACTTGGCACAGACT
CTAGACAACATGTTCTTAAGACCCAGCACGACTGTTTGTGCAAGATCATCAAATGTACAG
GAGCTAGGTGTCATGTCAGAAACAACGTCTTCTTCAAGATTATTAGATGGATCATCTGAA
TTTGTGCTGACTTATGAAGACAAAGATGGAGACTGGATGCTTGTTGGAGATGTTCCTTGG
GAGATGTTTATTAGCTCGGTCAAGAGACTACGAGTCATGAGGACATCTGATGCCAATGGA
CTCGGTACATCTCCAACTTTCATGGGAAGAAATGGTGGAAGACCGGGGACTAAGCCTATA
TAG

Peptide Sequence

PEP ID

Solyc09g064530.3.1
PEP Infomation

auxin-regulated IAA12
Sequence

MRGTLGLMGFGGVTYGVSVDGSICTLSKEDNNGVLLSSEASSSYPDETQLELGLGLSLGA
SADVALPKAKTGARGGYAKILTPKKDFPSLGSNSSSSCSSSSVIKPNNASCGTKRNADSI
SPPRSSVSQVVGWPPIRTYRMNTLVNQTKLPPPEEFSVTNEKCKSKNTIANAGSSKINNF
AKEKGLVKASLFVKVNMDGVTIGRKVDLNAHNSYENLAQTLDNMFLRPSTTVCARSSNVQ
ELGVMSETTSSSRLLDGSSEFVLTYEDKDGDWMLVGDVPWEMFISSVKRLRVMRTSDANG
LGTSPTFMGRNGGRPGTKPI*

Transcript Sequence

Transcript ID

Solyc09g064530.3.1
Transcript Infomation

auxin-regulated IAA12
Sequence

TGAAATATAAAATTGTGTTTATTAAGGAAAGTTTATCACACGAAACATTTCAGACTAAAT
TTAGATTTGGTCAATATTTAATATTTAATATTTAATATTGAACATCAAAAAAAAAAACAT
CTCGAATAAGTGTAATCAGTTTTACCTTCTATCGAAAAATTAGGTGATCGGTCAAACGTT
TGTCGATCTTTTTCAGTTGATTTTAGTCGTAAATGTCAATTAACGAATTTCGCTCTCAAT
ATTACAAAGTCGAAAATTAAAATTTTTTTGTTCCTCAATTTTACAAACATCTTCTATATT
TTTTTATTATAATCTTATCTTAATCGTGATATTCATCTATCCAACTCAAAAAATAAACAT
GTTATGTATAGAACGATTATATATGTATGCTATATTAAACCCCAACACATCATCATCCTT
GTTGTATTTTTTTTAAAAAAAGTGCTAAGCTAATAGAGCCGATTATATACACATCTATGT
TATATTTGACAAATTTGTATAATTTGGAAGCAAAAAATTTGATCTTTCTCCATTTTTTCA
TAATGAGTCTGAACCAAATTTGGTATTGTTGAAAAAACAAGATTCGTTATTGCCTGCTAC
AAAATGGCATTAGCGGGGACCGTTTAGGAGAAAAATCATCATCATATTCATCTTCTGAAG
CGCACAAAGCAGACAAAGCTACCCCACTTTTCTTACCTTCTCCAACACCCTTTACCTACC
TTCCCTTCAAGACCATCTCTTTTGCTCAAAACCCTTCAAGTTTTCTTGATGAGAGGTACT
CTTGGTTTAATGGGTTTTGGAGGAGTTACTTATGGGGTTTCAGTTGATGGCTCAATTTGT
ACTCTGTCAAAGGAAGATAATAATGGGGTGTTGCTATCATCTGAGGCTTCTTCATCATAC
CCTGATGAGACTCAACTTGAATTGGGTCTTGGACTGAGTCTTGGGGCTTCTGCTGATGTT
GCCCTTCCTAAGGCTAAAACTGGTGCAAGGGGTGGTTATGCTAAAATCTTGACACCCAAA
AAAGATTTCCCTTCTTTGGGTTCTAATTCATCATCTTCATGTTCATCTTCTTCTGTTATT
AAACCGAATAATGCTTCTTGTGGCACTAAGAGAAACGCTGATTCTATTTCTCCTCCTCGT
TCGAGTGTCAGTCAGGTTGTTGGATGGCCTCCTATAAGAACTTATAGGATGAACACCCTG
GTTAACCAGACAAAACTACCACCCCCAGAAGAATTTTCTGTGACAAACGAGAAATGCAAA
AGTAAAAATACTATCGCTAATGCTGGGAGCAGCAAGATCAACAACTTTGCAAAGGAAAAA
GGGCTCGTCAAGGCTTCTCTATTTGTGAAGGTCAATATGGATGGAGTTACAATTGGAAGG
AAGGTAGATCTGAATGCACATAATAGCTATGAGAACTTGGCACAGACTCTAGACAACATG
TTCTTAAGACCCAGCACGACTGTTTGTGCAAGATCATCAAATGTACAGGAGCTAGGTGTC
ATGTCAGAAACAACGTCTTCTTCAAGATTATTAGATGGATCATCTGAATTTGTGCTGACT
TATGAAGACAAAGATGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGGAGATGTTTATT
AGCTCGGTCAAGAGACTACGAGTCATGAGGACATCTGATGCCAATGGACTCGGTACATCT
CCAACTTTCATGGGAAGAAATGGTGGAAGACCGGGGACTAAGCCTATATAGGTCAGACAA
AGAATCTACTTTCAAAAGATAAAGAGACCTTCATTTGAAGGATGAAGTCTAAAAGGAAAT
TTTAGTGGATGGTAAAATAATTTTCTGAGTTAACAAATTGGTCCTATATGACCTTATTGG
TTTTTTGGTGTTTTTTTTTGGGTCACTTTTCTTGCTTTTTTTACTTCACGGTCTACCCCA
CTCTCTGGGAGGAGATCACTTTTACTGGATCACAGAAGATGCCTGTATATGTCATTCACC
ACGCAATCTTCAGCATAAGTTTCATTTCACCCTTGTGTAGCATGGATGTATCCACTTATA
CTATATTACAATGATGAGCTTGCCGCTCCCTGAAACAGATGAACACTAATGTTGTTGAAA
GGAAAGTTTGCTAGGTTCATACTGGGAACCTTTTTTTGTTGGTTTTGATAAAATCTTTCA
TTACTTTGATGTTTGTATTTCAATTTCTTGTCTTCTCTATTCTGCAACTATTTCTTTGAG
CAAGATACGTTGTCTACAGAACTTAAAATTATTTGATTGTAGAAGTTTTGGGAAGAAAGT
ATATCTTAGCCATGGTTTCTTGTGTTGCATATTGTCACTGGTTCAAGAAAAAGAAGCCTT
ATGAATGCATGTTCCCTGAGCCATGATTATCGATTAAATGAGCTCTAAATTGCTGTTTTT
CATTAGTGAGGTCAAGCCGCTTTCTTTTTATTGAATCTAATGGTATTTCAGGTGAGCAAT
ACAACTCCTAGTCTTGATTAGAGAATATGTGTGTTAGAAAACTCTGTTATTCGATCTATA
ATTTCTTCTTACATGATCAAAGAATTAGTAAAAACTAAAACATCACTTGCAGCAGTAATG
GGAAGAATGCTGCCTGTACTACCTTAATTCTACACATACAAGAATCCATGTATGAACCTC
TAAATACTACATGACAATTACAAATAAAATGGACTCAAATAGGGAAAGGGAAATGACTTC
TCTTCTTACAGAAGACCATTTACAGGTGATGTACTGAATATTGGCTTATCTTTGTTAGTA
GTAGCAGCATGGCTACCTCCACTGTTGCTACTGCTTTTTCTCCGAGGCTTTGCCTCTTCG
AGCATTGTCAAAACATCCCTCATGGATGGTCTGTCCTTGGGGAGTTTGGCTGTACATAGA
ATTGCTATCCTTAAAACTAACAACATTTCTTCTTGAACATGTTGTGTTGCTCCTACATTC
GGGTCAAGTGCTTCTTCTAAAGACTTATTGTCTCGGATCTTCATCCGAAACCACTCTACA
ATGTCAACAGATTCCCCGAATAGAGGATCTAGAGGACGTTTACCCGTCA