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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g063140.3.1
CDS Infomation

Protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *** A0A199UH97_ANACO)
Sequence

ATGGCTACGGCGGCGCTGTTCTCCTATATTACCGTCAATTCTCCCAACTTCCATCTTACC
GCCAAACTGTCCGAATTCTCCCGCCAATTGAAATATGGTGGGAAATACTACTCCGGCTTC
ACTGACATCTCCAGTTCCAGACGCAAACCGAAATCGCTCTCCGTAGTTTGTAACAATTCG
AGTCCTTCTTCTTCTGATATAAGTTCTACGGCCAAGATAAGAAGTGAAGTTCTTTCTCCC
TTTCGGTCTGTTCGGATGTTCTTCTATGTTGCTTTTATTGCAAGCGCTGGTCTTGGAGGA
CTTATTGCCTCTACACGACTGATTGCTGCATTGGCCAATTCATCAAGAGGTGCAGAAGTT
CCTGAGATCCTAAAAGGTCTCGGTATAGATCTCGGTGCAGTCTCCATATTTGCTTTTCTG
TATTATAGAGAGAATAAAGCGAAAAATGCTCAGGTAGCAAAATTAGCAAGAGAGGAAAAT
CTCTCAAATCTTAAGCTCCGTGTGGATGATAAGAAAATTGTCCCGGTTAGTGCTTTCAGA
GGAATTGCTCGTTTGGTCATCCTTGCTGGCCCTTCGGCTTTCATTTCAGAATGTTTTAAA
CTCAGTGCACCCTTTACTGAGGGCCTTCTAGAAAGAGGAGTGCTTGTGGTCCCTTTTGCA
ACTGATGGAATTTCTCCTAGCTTTGAATTTGAAGAGAATGACGAACTTGAGGAGAAAATT
TCCAGAAGAAAAAGGCTATGGCAGCTTGCTCCTATTTATGCCACTGAGTGGACCAAGTGG
ATAGATGAACAGAAGAAACTAGCCGGTGTTTCTCCTGAATCTCCAGTGTACTTATCTCTA
CGCCTGGATGGTCGTGTGCGTGGCAGTGGTGTTGGTTGTCCTTCTTGGAATGCTTTCGTA
TTGCAATTGCCACCAGTAAAGGGCATTTGGTCTGGTCTTCTTGATGGCATGGATGGAAGA
GTGCTTTAA

Peptide Sequence

PEP ID

Solyc09g063140.3.1
PEP Infomation

Protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *** A0A199UH97_ANACO)
Sequence

MATAALFSYITVNSPNFHLTAKLSEFSRQLKYGGKYYSGFTDISSSRRKPKSLSVVCNNS
SPSSSDISSTAKIRSEVLSPFRSVRMFFYVAFIASAGLGGLIASTRLIAALANSSRGAEV
PEILKGLGIDLGAVSIFAFLYYRENKAKNAQVAKLAREENLSNLKLRVDDKKIVPVSAFR
GIARLVILAGPSAFISECFKLSAPFTEGLLERGVLVVPFATDGISPSFEFEENDELEEKI
SRRKRLWQLAPIYATEWTKWIDEQKKLAGVSPESPVYLSLRLDGRVRGSGVGCPSWNAFV
LQLPPVKGIWSGLLDGMDGRVL*

Transcript Sequence

Transcript ID

Solyc09g063140.3.1
Transcript Infomation

Protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *** A0A199UH97_ANACO)
Sequence

TTTTAAAATTCGTTTTATTTTAAAAGCCAAATATTATTAAGGAAGACAAAATCGTCGTGG
CTGTGTTTGGATCATCCAAAACTAATATCCCTCCATTTCCCAACTCACGGTGGTAGCAGC
CATGTTTATACCATCACAAACCACTGCATTTCTACCGGGATAACGTTGCTCAGCCATGGC
TACGGCGGCGCTGTTCTCCTATATTACCGTCAATTCTCCCAACTTCCATCTTACCGCCAA
ACTGTCCGAATTCTCCCGCCAATTGAAATATGGTGGGAAATACTACTCCGGCTTCACTGA
CATCTCCAGTTCCAGACGCAAACCGAAATCGCTCTCCGTAGTTTGTAACAATTCGAGTCC
TTCTTCTTCTGATATAAGTTCTACGGCCAAGATAAGAAGTGAAGTTCTTTCTCCCTTTCG
GTCTGTTCGGATGTTCTTCTATGTTGCTTTTATTGCAAGCGCTGGTCTTGGAGGACTTAT
TGCCTCTACACGACTGATTGCTGCATTGGCCAATTCATCAAGAGGTGCAGAAGTTCCTGA
GATCCTAAAAGGTCTCGGTATAGATCTCGGTGCAGTCTCCATATTTGCTTTTCTGTATTA
TAGAGAGAATAAAGCGAAAAATGCTCAGGTAGCAAAATTAGCAAGAGAGGAAAATCTCTC
AAATCTTAAGCTCCGTGTGGATGATAAGAAAATTGTCCCGGTTAGTGCTTTCAGAGGAAT
TGCTCGTTTGGTCATCCTTGCTGGCCCTTCGGCTTTCATTTCAGAATGTTTTAAACTCAG
TGCACCCTTTACTGAGGGCCTTCTAGAAAGAGGAGTGCTTGTGGTCCCTTTTGCAACTGA
TGGAATTTCTCCTAGCTTTGAATTTGAAGAGAATGACGAACTTGAGGAGAAAATTTCCAG
AAGAAAAAGGCTATGGCAGCTTGCTCCTATTTATGCCACTGAGTGGACCAAGTGGATAGA
TGAACAGAAGAAACTAGCCGGTGTTTCTCCTGAATCTCCAGTGTACTTATCTCTACGCCT
GGATGGTCGTGTGCGTGGCAGTGGTGTTGGTTGTCCTTCTTGGAATGCTTTCGTATTGCA
ATTGCCACCAGTAAAGGGCATTTGGTCTGGTCTTCTTGATGGCATGGATGGAAGAGTGCT
TTAAGAATTGAGATCAGATATTGTCTTCTCTTTCTTATTCTTTGAAGAACTATATTATAT
TATGTTGACAATGTACTTATTTCCTCTTCAATATATAATTGCAGCATTCACCAAATTATC
TTTTGCTTCGTTTACTCCGTTCCTCCCTCTCTTTTTTCTTTGTTGGTGAGGTTAACTTTA
CGTGTATCCAGGCCAGGATGTTTCCGACAGTGGAAGCAGGGGATGGGATCCAGGGTATGC
ATGTTGCATGGATCAAGTTTTAATAATCCTATGACCGAAAATGGAATGTGGTATTAATTA
CTATTTTTTCCATGATAAGTTTATTTGATAGAGAAAGTTGTCTATTTGACGTGTAAAAAT
GGAAGTCCTCAAAAATTTCATATTTACATAGATTATTACTGTTGTCTATAATTGACGTTT
TGATTGGTAGTGTCTTTTTCCTATTGAATAGCTACATTTCTTTGCTTCCAAAACATGAAA
ATGTCTTGCTACATGCTACTTTGATCACTATCATCTCACAATGGAATGGAAACAAGAGAG
ATCAATTAAAGTGTAAGCCAAAAGACAGGAATAGAACGGTGAATGGATCCCGTGCCCTGT
TACTGCATTGAGGTGGCTTGACAGCTTTGGCAGGAGGAGCTTCGCCTTCAGCGGTGGCAG
TAGGAGCTGGTGGTGCAGCTTCTTCCGCGGCCCGTACAACGAGCCTGGGGATGTTGGTGG
TGGTGTTCTTGGAGGAGAAAGATAACATAGAGCTCTTTGGAGCAGAGTTAGAGGTGACAT
TAGGGGTTGCCACCATAAAACCAGATGCAGCAGAAGCCATGCTGCTACTTGCCATGCTTT
TTTTTTGTGTTTCTTTGTCTGAACTTGTTCTTCTGCTGCAGAGGAATGATGAAAATTAAT
GTAAAGAGCAAAAGCAGAAGTAGGATTTGAGAGGCTTTGAGTTAATGGGATATCTTTTTC
CTGGACAAAAGATCAACCTAACTACCACACGACATTGCTCCATCCACTGACACGCTGCCA
CATGGTACCATATCCAATTCATATGGATAATGTTACCACTTTTATTTCGTCTCACATATT
TTGCTTTTTTTTTGTTATTCATAGTGTATTATTAATTTTTAATTGTGCTTTT