Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g061430.3.1
CDS Infomation

nuclear GTPase DQ304482
Sequence

ATGGTGAAGAAAAGCAAAAAGAGTAAGAGTAAGAGGGTGTCTTTGAAGCAGAAGCATAAG
ATTATAAGGAAAGTGAAGGAGCACCATAAGAAGAAGGCCAAAGAGGCAAAAAAGCTTGGA
CTTAATAAGAAACCTAAGGTAGAGAAAGATCCAGGAATTCCTAATGATTGGCCTTTTAAG
GAGCAAGAACTCAAGGCTCTTGAGGCTCGTCGTGCTCGTGCTCTCGATGAATTGGAGCAG
AAGAAAGCTGCCCGTAAAGAGAGGGCTAAGAAGAGAAAGCTTGGATTACTTGAGGATGAT
GATGTGTCCAAACTGGAAGGTTTGACTTCAACAAAAGAAAAAGAAGTTGGAGGTGGAAGG
GTAAATGATGGCTCAGCTTCTTTTGTTAAACAACGAGATAACTCTGAAAGGGCTTTCTAC
AAGGAGTTGGTCAAAGTAATTGATGCTTCGGATGTAATTTTGGAAGTGCTTGATGCTCGA
GATCCTCTTGGTACCCGCTGTCTTGACATGGAAAAGATGGTGATGAGAGCAGGACCTGAG
AAACATCTTGTGTTACTCCTTAATAAAATTGATCTTGTTCCTCGGGAAGCTGCAGAAAAG
TGGCTAAAGTATTTAAGAGAGGAATTACCAACGGTTGCTTTCAAGTGTAGCACCCAAGAG
CAGAAGTCAAACCTGGGTTGGAAGCCTTCCTCAAAGGCTGGTAAGAGTAAGACTAGCAAT
CTTCTGCAAACCAGTGATTGCCTTGGCGCCGAGACACTGATAAAATTGCTGAAGAATTAC
TCACGAAGCCACGAGATCAAGAAATCAATCACTGTAGGAGTCATTGGTCTACCAAATGTT
GGTAAAAGTAGCCTGATTAATAGCTTGAAGAGATCTCATGTAGTCAATGTAGGTGCTACT
CCAGGATTAACAAGATCCCTGCAAGAAGTCCAGTTAGATAAGAATGTTAAATTGCTGGAC
TGCCCCGGTGTTGTGATGCTTAGGTCTGCATCTGAGGATGATGCATCTATTGCTCTTCGA
AATTGCAAGAGGATAGAAAAGTTAGATGACCCAATTGGTCCTGTAAAGGAGATTCTCAAA
CTTTGTCCAGAAAGAATGTTGGTTACCATATACAAGATTCCTACCTTCGATTCTGTGGAT
GACTTTCTTCAGAAAGTTGCTATGGTTAGAGGTAAGCTCAAAAAGGGAGGAATCGTTGAT
ACTGATGCAGCTGCAAGGATCGTTCTGCACGACTGGAATGAGGGGAAAGTTCCATACTAC
ACCCTGCCCCCAACCAGGAATGAGGGGGAGCATTTAGAGGTCAAGATAGTTTCAGAATTT
GGGAAAGAATTCAATATCGATGAAGTTTATGGAAGTGAATCCTCTATTATTGGAAGCCTG
AAATCTGTCAACGATTTCAACCCAGTTGAAGTTCCATCAAATCGGCCCATTAACTTTGAT
GATAACATGCTTGAGGACAATTTGCAGCAGCCATTAGTTGAAAGCGATAATGCCACAGAA
AACCTTGTTAGTGAGAACAGAGATGAGCCAATGGACTCGGGAGAAGGTGATGGAGCCCAG
ACAAGAGGCAAAAGTGCTAGTAGTAGACAAAATGAGAAGTTATACGGTGAGGAAGGCATG
TTGAACACTAAACAGAAGAAAGCTGAGAAGAAAAGGAGGAAGAAAGACAAGCCCTCAACT
GCCATTGATATGGACGGTGATTACGACTTTAAGGTAGATTATATCAAGAAGGATTCTGCT
ATGGATGATGCTGATGAAGTTGTTGCAACTGATGAAAGTAAGAACAACAGATTTGAGCTG
CCATCTGGGTTTGAGTTGGATAATGAATGA

Peptide Sequence

PEP ID

Solyc09g061430.3.1
PEP Infomation

nuclear GTPase DQ304482
Sequence

MVKKSKKSKSKRVSLKQKHKIIRKVKEHHKKKAKEAKKLGLNKKPKVEKDPGIPNDWPFK
EQELKALEARRARALDELEQKKAARKERAKKRKLGLLEDDDVSKLEGLTSTKEKEVGGGR
VNDGSASFVKQRDNSERAFYKELVKVIDASDVILEVLDARDPLGTRCLDMEKMVMRAGPE
KHLVLLLNKIDLVPREAAEKWLKYLREELPTVAFKCSTQEQKSNLGWKPSSKAGKSKTSN
LLQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVGKSSLINSLKRSHVVNVGAT
PGLTRSLQEVQLDKNVKLLDCPGVVMLRSASEDDASIALRNCKRIEKLDDPIGPVKEILK
LCPERMLVTIYKIPTFDSVDDFLQKVAMVRGKLKKGGIVDTDAAARIVLHDWNEGKVPYY
TLPPTRNEGEHLEVKIVSEFGKEFNIDEVYGSESSIIGSLKSVNDFNPVEVPSNRPINFD
DNMLEDNLQQPLVESDNATENLVSENRDEPMDSGEGDGAQTRGKSASSRQNEKLYGEEGM
LNTKQKKAEKKRRKKDKPSTAIDMDGDYDFKVDYIKKDSAMDDADEVVATDESKNNRFEL
PSGFELDNE*

Transcript Sequence

Transcript ID

Solyc09g061430.3.1
Transcript Infomation

nuclear GTPase DQ304482
Sequence

CAAAACCCTAAAACCCTTCCTTCTCTGTTAAATCCGTGAAAGAGCAGTGAGAGAGAGAGA
GAGCTTATCGACAAAGCAAAAATGGTGAAGAAAAGCAAAAAGAGTAAGAGTAAGAGGGTG
TCTTTGAAGCAGAAGCATAAGATTATAAGGAAAGTGAAGGAGCACCATAAGAAGAAGGCC
AAAGAGGCAAAAAAGCTTGGACTTAATAAGAAACCTAAGGTAGAGAAAGATCCAGGAATT
CCTAATGATTGGCCTTTTAAGGAGCAAGAACTCAAGGCTCTTGAGGCTCGTCGTGCTCGT
GCTCTCGATGAATTGGAGCAGAAGAAAGCTGCCCGTAAAGAGAGGGCTAAGAAGAGAAAG
CTTGGATTACTTGAGGATGATGATGTGTCCAAACTGGAAGGTTTGACTTCAACAAAAGAA
AAAGAAGTTGGAGGTGGAAGGGTAAATGATGGCTCAGCTTCTTTTGTTAAACAACGAGAT
AACTCTGAAAGGGCTTTCTACAAGGAGTTGGTCAAAGTAATTGATGCTTCGGATGTAATT
TTGGAAGTGCTTGATGCTCGAGATCCTCTTGGTACCCGCTGTCTTGACATGGAAAAGATG
GTGATGAGAGCAGGACCTGAGAAACATCTTGTGTTACTCCTTAATAAAATTGATCTTGTT
CCTCGGGAAGCTGCAGAAAAGTGGCTAAAGTATTTAAGAGAGGAATTACCAACGGTTGCT
TTCAAGTGTAGCACCCAAGAGCAGAAGTCAAACCTGGGTTGGAAGCCTTCCTCAAAGGCT
GGTAAGAGTAAGACTAGCAATCTTCTGCAAACCAGTGATTGCCTTGGCGCCGAGACACTG
ATAAAATTGCTGAAGAATTACTCACGAAGCCACGAGATCAAGAAATCAATCACTGTAGGA
GTCATTGGTCTACCAAATGTTGGTAAAAGTAGCCTGATTAATAGCTTGAAGAGATCTCAT
GTAGTCAATGTAGGTGCTACTCCAGGATTAACAAGATCCCTGCAAGAAGTCCAGTTAGAT
AAGAATGTTAAATTGCTGGACTGCCCCGGTGTTGTGATGCTTAGGTCTGCATCTGAGGAT
GATGCATCTATTGCTCTTCGAAATTGCAAGAGGATAGAAAAGTTAGATGACCCAATTGGT
CCTGTAAAGGAGATTCTCAAACTTTGTCCAGAAAGAATGTTGGTTACCATATACAAGATT
CCTACCTTCGATTCTGTGGATGACTTTCTTCAGAAAGTTGCTATGGTTAGAGGTAAGCTC
AAAAAGGGAGGAATCGTTGATACTGATGCAGCTGCAAGGATCGTTCTGCACGACTGGAAT
GAGGGGAAAGTTCCATACTACACCCTGCCCCCAACCAGGAATGAGGGGGAGCATTTAGAG
GTCAAGATAGTTTCAGAATTTGGGAAAGAATTCAATATCGATGAAGTTTATGGAAGTGAA
TCCTCTATTATTGGAAGCCTGAAATCTGTCAACGATTTCAACCCAGTTGAAGTTCCATCA
AATCGGCCCATTAACTTTGATGATAACATGCTTGAGGACAATTTGCAGCAGCCATTAGTT
GAAAGCGATAATGCCACAGAAAACCTTGTTAGTGAGAACAGAGATGAGCCAATGGACTCG
GGAGAAGGTGATGGAGCCCAGACAAGAGGCAAAAGTGCTAGTAGTAGACAAAATGAGAAG
TTATACGGTGAGGAAGGCATGTTGAACACTAAACAGAAGAAAGCTGAGAAGAAAAGGAGG
AAGAAAGACAAGCCCTCAACTGCCATTGATATGGACGGTGATTACGACTTTAAGGTAGAT
TATATCAAGAAGGATTCTGCTATGGATGATGCTGATGAAGTTGTTGCAACTGATGAAAGT
AAGAACAACAGATTTGAGCTGCCATCTGGGTTTGAGTTGGATAATGAATGAAAGATAAAC
TCCCAGCTAGAAAATATGCTTAAAAATCACTTTTTGTGGTTGCTAAATTTTTGTTTGCCC
TGTGAAATATATTTGATACCGGAGACCATCTTTTTTGTTGTACTAAATTTGAGTCAACTA
TATATCACGAGAAGCATTTTTTTCCATTGCATAGTTTCTTTCCTCAGTTTAGTTGTCTTA
TTAAGTTTCAGACGAAATATTTGAACGACTTATTTGTACGTCACAAATTTAGTCTCTCTG
CTCTGTAGATTAGAAAATTTCTTGATGTGGTGATAGCTTTATCATCTATGTACAATTTTT
TGGACCAGTAACACGAATCACAACATTGTACTAGATTTTATGAAGTTTTATTAATTATGT
AGAGAGAAAAGGTACAATGTTTATGGTGAAATGGTATTCACAGATAGAGTTCTATTTCCT
CTTCCACAAGTATCATACTGTTCCATTGGACAACTCTAACTAGGTATTTCATTACAAGGA
CGAATGCAATACAACTACAGTATCAATCTCCATTTGATATCCCTATCTCAGAGTCCTTGG
CAGGCTGGGAATTTATGTTTGTCAGCGGCGGACTAGCTACGCTCCCAGAAGCTGAGGCTG
CAGTTGCTGTCGATGTGTCTGCTTCATATGAGTTGGAAATAAGTCCTTGTGTTTCCATCG
TCTCACGTGCTGCTTTCTCTTTGGCTTGTTTGGCTCTTTCAAGAATCTCCTCCTGTTTTT
GCACAAACCATCGAGGTTACACATTTCTGGCAAAGTAGTCTATGAACTTTATTACTAAGT
ATTTTCTGGGTGGAAACAACTCTGGACATCCAGGAATCAAAAACAAGAATTTCATCATTA
CGATGCTTAGACTGTTATAACATATTAAAGATACGCAGGCTGATTGTGTGTATACCAAGA
GGAAACCTTATTCAAAATTTTAGCCTTTTCTAATTTTACAGGTTTTGTTGTAGTTGTTGG
TAAATGGCAATATAAAGCTATTAAATGTCATCATTGAATGAGGACCTTCAAAGTAAAATA
AAACAAAATTTTCAAACCATTCATATTAATTAATCTAACTTAAAGCATCTAGTTTTCCAC
TTGAACTACTTAATACCTGGAAGTCCTGAACTTGCTTTTGTTGCTCCGATTGCAATCTGC
CAACTGTACTTAGGAACTCCCCTACTGTAGACTCTATGCGCTCAGTAACTGCTTCTGCCA
GAGCTTTACCTAAGAAGAACGCATCAAGGACATTCTTACTCTCATTTTCACCTGCAAGAG
AGATGATTTTAGTTATTTTGAGTATATGCAGGGATCTAGCAAAGACTAATGAAACAACAA
ACTAGTGACTAATTTCATATTCAAAAGGAAACCCGATTACGCTCTCTGCGCACCCAACCA
AACCAAAACAAGAGGAAAAAGAAAGTCTAGGGAAGCCAAAAAGAATTGGGAAGAATTAAT
GAAAGGTTTATTCTCAGTTCAAGTTACAAAGAAAGTCTCTTTGAACCGCTAATACAAATC
ATAAAAAAATGTGGGCTCTTCAAATGGAGCAAAAAGAAAATATAGGAAAACTGACTCCCC
ACCCCCACCCAAAAGGAAATGAAGAGGAACAAGAAGTGAAGAAATTGTGAAAAACAAAAT
GAATTTATTCCAAATGAAGGGAGATGTCCCAGGACAGAAGGACCGACAAATAGGAAAGAA
CTCCCAAGACAGAACACTGCAGTCAGCCGAAGTTTGCGGACACCAAATGAAAGAATGAGT
AATTCTAACAGACCATTACGTAGAACTTGTAGATCGAGGAAGACGTAGGCCTTAAGGTGC
TTCTCTTTTTCTGTTGAATATCTTGATGCTTCATTCTACTTGGTTACTTCGTGTGGTCAC
TATTAAATCTCCTCGATAATAGTCACAGTCATAGCTTCTAGGTTCAAGTTTATACATACC
ACTCTGACCAGCTGGCAGTCACATGCCTACCAAATAGGTACTACTTCAAGACAAGGTAGG
GCATAGTTAATAATACAGTTCAAATGCTTCGACTATTACCCAACATCCATAGCTTATATA
TACCCTATGACTAGGCAGGATATACCATCACTCCTTCATATCACCTTTGCTAAACAATAC
TTTTCAGCATACAAGTAGCACAACACCATACCATATGAGTTTCAAGGACGGACATTAGAG
CCAAATATGAGTAATGGGCAATATTCCTTACTAAATAAAAAAAAAGTATGATGATATAGC
AGCAGAGAAATGATCAGAGACATAACCATAGCAGCCCAATTCAAGTTAGCCAATACAGTT
TCTGAAGAAACAGCTATTCTTTGCACTTCCCTTTGTACCCAGTACCATGAAGCAAGTCCA
AAACATAAGTGTAATGGATTCATCTATTATAAGTCGCTTCTCTGACTTATA