Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g059430.3.1
CDS Infomation

RPM1-interacting protein 4 (AHRD V3.3 *** B9GQK9_POPTR)
Sequence

ATGGCTCGTCCAAATGTGCCAAAGTTTGGGAATTGGGAAAATGACGATAATACGCCCTAT
ACTGTATATTTTGAAAAAGCCAGGCAAACTCGTGGTACTGGAAAGATGATGAACCCCAAT
GATCCCGAAGAGAATCCAGATATGTTTCGTAATCTTGCTCCACCACCTGAAGTTGCTCCT
CAATCCAAGCCTAAAAGACAAACAGAGGAACCACCAATTGGGCGTGGTGGACCAGCTAGG
CAAACACGGGACCATAGACTAAGTAAAGAAGATGGTGAATTCCGCCAGTATGCTAATTCT
CCAGCTCGTAAAGAGAGTGTGGGAAGGAAAGGTGCCAATGAGCCATCTCATCAACGTGGT
CGTGGATCAAATTCTGGTAGAACTGGCAGACAAAGTATAGGATCTGAACATAGCTTTGAT
AAATCACCGCTGCATCCACATTACCAGGCAAAGGTTAGTAATGCTGGAAGAGGTGTTGCA
TCTCCTGCTTGGGAAGGAAAGAACAATTCTTATGATAGCAGTCACGGTACTCCTGGAAGG
TCCAAAGTTAAGCAAGACAAATCTGATAGAGGGGCTGCAGTTCCAAGATTCGGAGAGTGG
GACGAGAATGATCCTCAATCTGCTGACAACTACACACACATTTTCAACAAATTCCGAGAG
GAAAAGCAAGGAAATCCATCAGGGACACCTAGTAGAACATCGAACAATACACAAAAGCAT
AACTCAGAGGAAAAGCAAAGGAAGTGGTGTTGTTGTCCCTGGTAA

Peptide Sequence

PEP ID

Solyc09g059430.3.1
PEP Infomation

RPM1-interacting protein 4 (AHRD V3.3 *** B9GQK9_POPTR)
Sequence

MARPNVPKFGNWENDDNTPYTVYFEKARQTRGTGKMMNPNDPEENPDMFRNLAPPPEVAP
QSKPKRQTEEPPIGRGGPARQTRDHRLSKEDGEFRQYANSPARKESVGRKGANEPSHQRG
RGSNSGRTGRQSIGSEHSFDKSPLHPHYQAKVSNAGRGVASPAWEGKNNSYDSSHGTPGR
SKVKQDKSDRGAAVPRFGEWDENDPQSADNYTHIFNKFREEKQGNPSGTPSRTSNNTQKH
NSEEKQRKWCCCPW*

Transcript Sequence

Transcript ID

Solyc09g059430.3.1
Transcript Infomation

RPM1-interacting protein 4 (AHRD V3.3 *** B9GQK9_POPTR)
Sequence

ATTATTGGTACTACCTAACTATTTCTTCTTTAATTCTCATCTTCGCCTTCTCTTTTTCTC
TCCGCAGCTTTGATCATTCATTTGGTGAACCACAATGGCTCGTCCAAATGTGCCAAAGTT
TGGGAATTGGGAAAATGACGATAATACGCCCTATACTGTATATTTTGAAAAAGCCAGGCA
AACTCGTGGTACTGGAAAGATGATGAACCCCAATGATCCCGAAGAGAATCCAGATATGTT
TCGTAATCTTGCTCCACCACCTGAAGTTGCTCCTCAATCCAAGCCTAAAAGACAAACAGA
GGAACCACCAATTGGGCGTGGTGGACCAGCTAGGCAAACACGGGACCATAGACTAAGTAA
AGAAGATGGTGAATTCCGCCAGTATGCTAATTCTCCAGCTCGTAAAGAGAGTGTGGGAAG
GAAAGGTGCCAATGAGCCATCTCATCAACGTGGTCGTGGATCAAATTCTGGTAGAACTGG
CAGACAAAGTATAGGATCTGAACATAGCTTTGATAAATCACCGCTGCATCCACATTACCA
GGCAAAGGTTAGTAATGCTGGAAGAGGTGTTGCATCTCCTGCTTGGGAAGGAAAGAACAA
TTCTTATGATAGCAGTCACGGTACTCCTGGAAGGTCCAAAGTTAAGCAAGACAAATCTGA
TAGAGGGGCTGCAGTTCCAAGATTCGGAGAGTGGGACGAGAATGATCCTCAATCTGCTGA
CAACTACACACACATTTTCAACAAATTCCGAGAGGAAAAGCAAGGAAATCCATCAGGGAC
ACCTAGTAGAACATCGAACAATACACAAAAGCATAACTCAGAGGAAAAGCAAAGGAAGTG
GTGTTGTTGTCCCTGGTAATTATGCAAGGGAGGATCTTGATTTTATTCCAAAACAGCCAA
GGGATGTGTAAATAGTTCAACAAATTACTTGTGCAATATATTAGAGTAATTCATTTATAC
TTTGTTCCCACAGTATTCTGCAATTGTATTGTCAACTTGTAGTCTTTAATATTGTACTTG
TGTTTGTATGTTACAAACAGTGCTTGCAGATTTTTTATGCTTTCGCAATGTTGTATGTGT
GAAGTCTAGTATTGTTGCTTGGTCTTTTCTGGCAATGCAAATGCTTATAATATTTGATTA
CTGCTCAAACTTTCTTCTTCTAAAACAGAATTTTGCATTTTTAATAATGAGATTTGAAGT
ATCGAATTATCCATAAATTTGAAGTTGATTCCTTTGCTTGTTAGTAAAATTCAAATACT