Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g057660.3.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A0K9NXQ5_ZOSMR)
Sequence

ATGGATGACGATTTTGATATTCCCGGAGCAGAAGGAATGGATGATGACATGGATCTGCCG
GACGAAAGTCCGATCATGAAAGTTGGCGATGAGAAGGTGATCGGAAAAGAAGGTTTGAAG
AAGAAGCTTGTTAAAGAAGGTGAAGGATGGGACACTCCTGAAGCTGGAGATGAAGTAGAA
GTTCATTATACTGGCACTCTGCTTGATGGGTCCAAGTTCGATTCCAGTCGCGATAGGGGT
ACTCCTTTCAAGTTCACTCTCGGTCAAGGACAAGTGATTAAGGGATGGGATCAAGGTATT
AAGACAATGAAAAAGGGTGAAAATGCCATTTTCACCATTCCTCCAGAGCTGGCTTATGGA
GAGTCTGGTTCTCCTCCAACTATCCCTCCAAATTCCACTCTCCAGTTTGATGTTGAATTG
CTATCATGGGTGAGTGTAAAGGACATCTGCAAGGATGGTGGTATTTTCAAGAAGATCCTC
ACCAAGGGAGAGAAATGGGAAAATCCCAAGGATCTTGACGAAGTTCTAGTCAAGTATGAA
GCTCAACTTGAAGATGGATCATTGGTTGGAAAATCAGATGGAGTGGAGTTCACTGTTCAG
GAAGGACACTTCTGCCCTGCTATTGCGAAAGCTGTGAAAACTATGAAGAAAGGTGAAAAA
GTCCAGTTGACGGTGAAGCCACAGTATGGCTTTGGGGAGAAAGGAAAACCAGCCTCAGGT
GATGGAGGAGCGGTCCCACCTAATGCTCCACTGCAAATTAGCTTGGAGTTGGTAACATGG
AAGATTGTCTCAAGTGTAACTGACGATAAGAAAGTAATAAAGAAGATCTTAAAAGAAGGG
GAAGGATTTGAGAAACCGAATGAAGGGGCTGTGGTTAAAATGAAATTGATCGGCAAGCTA
CAAGATGGCACAGTCTTCATAAAAAAGGGCCACAATGGAGAAAATGAAGACGAGCTTTTT
GAGTTTATGATAGATGAGGAACAAGTTATTGATGGGTTGGATAGAGCTGCTATGTCAATG
AAGAAGGGTGAAGTGGCACTGCTAATAATTGCACCTGATTATGCCTTCGGTCTGTCTGAA
TCAAAGCAAGACTTAGGTGTTGTTCCTCCCAACTCAACTGTATATTATGAGGTTGAGCTG
GTTTCCTTTGTCAAGGAAAAGGAATCATGGGATATGAATACACAGGAGAAAATTGAGGCC
ACTGGTAAAAAGAAAGAGGAAGGAAATGCTCTCTTCAAGGCTGGTAAGTATGCAAGAGCA
TCAAAGAGATATGAGAAGGCTGCTAAATTTATTGAATATGATACTGACTTTAGTGAAGAG
GAAAAGAAACAAGCTAAAGCTTTGAAGATCAGCTGCAACTTAAATGATGCAGCTTGCAAG
TTGAAACTGAAAGATTACAAGCAGGCGGAGAAGCTGTGTACCAAGGTGTTGGAAACTGAG
AGTACTAATGTTAAAGCTCTTTACCGGAGAGCTCAAGCATATATGAACATGGCAGATCTT
GATCTGGCTGAATTTGACATTAAGAAAGCCCTTGAGATTGATCCTAACAACAGGGATGTG
AAGCTTGAATACAAAGCTCTGAAGGAGAAGGTTAAGGAATTCAATAAGAAGGATGCAAAA
TTCTATGGGAACATGTTTGCTAAGTTAAATAAGTTGGATACCAACTATATGTAA

Peptide Sequence

PEP ID

Solyc09g057660.3.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A0K9NXQ5_ZOSMR)
Sequence

MDDDFDIPGAEGMDDDMDLPDESPIMKVGDEKVIGKEGLKKKLVKEGEGWDTPEAGDEVE
VHYTGTLLDGSKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPPELAYG
ESGSPPTIPPNSTLQFDVELLSWVSVKDICKDGGIFKKILTKGEKWENPKDLDEVLVKYE
AQLEDGSLVGKSDGVEFTVQEGHFCPAIAKAVKTMKKGEKVQLTVKPQYGFGEKGKPASG
DGGAVPPNAPLQISLELVTWKIVSSVTDDKKVIKKILKEGEGFEKPNEGAVVKMKLIGKL
QDGTVFIKKGHNGENEDELFEFMIDEEQVIDGLDRAAMSMKKGEVALLIIAPDYAFGLSE
SKQDLGVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEATGKKKEEGNALFKAGKYARA
SKRYEKAAKFIEYDTDFSEEEKKQAKALKISCNLNDAACKLKLKDYKQAEKLCTKVLETE
STNVKALYRRAQAYMNMADLDLAEFDIKKALEIDPNNRDVKLEYKALKEKVKEFNKKDAK
FYGNMFAKLNKLDTNYM*

Transcript Sequence

Transcript ID

Solyc09g057660.3.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A0K9NXQ5_ZOSMR)
Sequence

ATTGGAGAATCCTCAAAACTCACTCTAAAACCTCATTGAAACGCTCTTTACCCGTTCTCT
CACGCCACATCACTGTTTTGTTCGAGTGCACCATTTTACTACTCCAATGGATGACGATTT
TGATATTCCCGGAGCAGAAGGAATGGATGATGACATGGATCTGCCGGACGAAAGTCCGAT
CATGAAAGTTGGCGATGAGAAGGTGATCGGAAAAGAAGGTTTGAAGAAGAAGCTTGTTAA
AGAAGGTGAAGGATGGGACACTCCTGAAGCTGGAGATGAAGTAGAAGTTCATTATACTGG
CACTCTGCTTGATGGGTCCAAGTTCGATTCCAGTCGCGATAGGGGTACTCCTTTCAAGTT
CACTCTCGGTCAAGGACAAGTGATTAAGGGATGGGATCAAGGTATTAAGACAATGAAAAA
GGGTGAAAATGCCATTTTCACCATTCCTCCAGAGCTGGCTTATGGAGAGTCTGGTTCTCC
TCCAACTATCCCTCCAAATTCCACTCTCCAGTTTGATGTTGAATTGCTATCATGGGTGAG
TGTAAAGGACATCTGCAAGGATGGTGGTATTTTCAAGAAGATCCTCACCAAGGGAGAGAA
ATGGGAAAATCCCAAGGATCTTGACGAAGTTCTAGTCAAGTATGAAGCTCAACTTGAAGA
TGGATCATTGGTTGGAAAATCAGATGGAGTGGAGTTCACTGTTCAGGAAGGACACTTCTG
CCCTGCTATTGCGAAAGCTGTGAAAACTATGAAGAAAGGTGAAAAAGTCCAGTTGACGGT
GAAGCCACAGTATGGCTTTGGGGAGAAAGGAAAACCAGCCTCAGGTGATGGAGGAGCGGT
CCCACCTAATGCTCCACTGCAAATTAGCTTGGAGTTGGTAACATGGAAGATTGTCTCAAG
TGTAACTGACGATAAGAAAGTAATAAAGAAGATCTTAAAAGAAGGGGAAGGATTTGAGAA
ACCGAATGAAGGGGCTGTGGTTAAAATGAAATTGATCGGCAAGCTACAAGATGGCACAGT
CTTCATAAAAAAGGGCCACAATGGAGAAAATGAAGACGAGCTTTTTGAGTTTATGATAGA
TGAGGAACAAGTTATTGATGGGTTGGATAGAGCTGCTATGTCAATGAAGAAGGGTGAAGT
GGCACTGCTAATAATTGCACCTGATTATGCCTTCGGTCTGTCTGAATCAAAGCAAGACTT
AGGTGTTGTTCCTCCCAACTCAACTGTATATTATGAGGTTGAGCTGGTTTCCTTTGTCAA
GGAAAAGGAATCATGGGATATGAATACACAGGAGAAAATTGAGGCCACTGGTAAAAAGAA
AGAGGAAGGAAATGCTCTCTTCAAGGCTGGTAAGTATGCAAGAGCATCAAAGAGATATGA
GAAGGCTGCTAAATTTATTGAATATGATACTGACTTTAGTGAAGAGGAAAAGAAACAAGC
TAAAGCTTTGAAGATCAGCTGCAACTTAAATGATGCAGCTTGCAAGTTGAAACTGAAAGA
TTACAAGCAGGCGGAGAAGCTGTGTACCAAGGTGTTGGAAACTGAGAGTACTAATGTTAA
AGCTCTTTACCGGAGAGCTCAAGCATATATGAACATGGCAGATCTTGATCTGGCTGAATT
TGACATTAAGAAAGCCCTTGAGATTGATCCTAACAACAGGGATGTGAAGCTTGAATACAA
AGCTCTGAAGGAGAAGGTTAAGGAATTCAATAAGAAGGATGCAAAATTCTATGGGAACAT
GTTTGCTAAGTTAAATAAGTTGGATACCAACTATATGTAAGTTTCAGAATCATGATTTCT
AGAGTCTATGTAGCTCCATCTTGTTTGGTGATCAGTTAAAGACACTTCATCTTTGTGAAA
TCTGCTTTCAAGCAACCACAACCGATGAGCTTAGACAGCAAAGCATAGTTGTCTTAAGCA
GACAAGTCTTACTTTCATGACGCCTTGTTAGTTGTTTAGGAGTGTTAGTCTAAGCTATTA
GAACAACTTGATCTGTGTCAGTCATAGCCATCAAAAAACGCTTGATCTCTTTTGTTGAAT
CCTATTTGCATGAGGTTAACTTTGACACCTGCAGCTGAATTATTGAAGCTCTTCTACATG
TTTAGGCTTAATGTTGTTGATATCTTAATGGACCTTATGAAACTGCTTTGTGCTAGGCTG
TGGATGAAGCGGAAGAAAATGTTTTTCTGTTTTCTCGTGGTATCAAAAATTTGTGGGTCC
AAGGAAAAAAATAATGTGATGTTCTGCGTTCGATTCTCTCTATTTTGAGCAAAGCAAATG
TATGACAGAAAAAAGAGAAACAAATTGGAATGGGCTTTAAACTTAACTAGGTGCGATTTT
CTATAGAAAAATTACATAAATAAAGCAAACTTAGGTGTGAGTTTAAAGTTTCATTTGCTT
CCATCTCTCACCTTTTACTTAGCACAACACTTCTCTACCCATTTTCAAACTCCTGCATCC
TAGTTACATACAGTCTCATGAATTACTTCCTTAAATTGTCGATCATTTTTCAATTAGGTA
GAGATTTTGTATAATTATGTGTTGATAAGCGTATTCATAGTTTACTATTAGTCTATTAC