Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g056170.3.1
CDS Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

ATGGCTGGATATGTTGGTGTATTGGTATCAGATCCGTGGCTGCAAAATCAGTTTACCCAG
GTTGAGCTTCGAAGTTTAAAATCTCACTTCGACGCGATGAAGAGAGAGAAGGGGTGTATG
ACCCTTGCAGACTTGCCTTCACAAATGGCGAAACTGAAACAAGTCGGAGAGAATCTTACA
GAGAAAGAAAGAGAGTCGTTTATCAGAGATTCCTATAAATGTTTGGATGTAGACGTTGAT
TTCGAGATATTTCTTCGGGTCTATTTGAAACTCCAAGCACATGCTGCAGCAAGAATGGGA
AATAATGTCAAGAACTCATCAGCTTTCCTAAAGTCTCCAACTTCTACATTACTTCATACA
ATTAGTGAATCTGAGAAGGCATCATATGTTGCCCATATTAACAACTATCTCGTGGGAGAT
GAATTTTTGAAAAAATTCCTTCCTATTGATCCTTCTACAAATGATCTCTTTGAGATTTCC
AAGGATGGAGTTCTTATATGTAAGCTTATCAATGTGGCTGTGCCTGGAACAATTGATGAA
CGAGCAATAAATATGAAAAGAATGCTTAATCCATGGGAAAGGAATGAAAATCATACTTTG
TGCCTAAACTCTGCAAAGGCTATTGGATGTACTGTGGTCAATATTGGGACACAAGACTTT
ATTGAAGGAAGGAGGCATCTTGTTCTTGGAGTAATATCTCAAATTATTAAGATTCAACTA
TTGGCAGACCTCAATCTAAAGAAAACACCTCAATTGGTGGAGTTAGTTGATGATAGCAAG
GATGTAGAAGAGTTGATGAACCTTCCTCCAGAAAAGATCTTGCTTAGATGGATGAATTTT
CAATTGAAGAAAGCTGGATACAACAAAATTGTGACAAACTTCTCTTCTGACATAAAGGAT
GGAGAAGCTTATGCTCGCCTCCTAAATGTTCTAGCCCCAGAGTACACCACTCCTTCCATG
CTCACTGTAAGAGACCCTTCAGAAAGAGCAAAATTGGTTCTGGAACATGCAGATAGGATG
GGCTGCAAAAGATACTTAACAGCAAAAGATATTGTGGAAGGTTCTCCAAATCTTAACCTT
GCATTTGTGGCACATATCTTTCAGCATAGGAATGGGCTCTCAACTGAAGCAAAGCAGATA
CCGTCTGTTGAGACATCACCAGATGAAGCTCAGATGTCCAAAGAAGAAAGATCATTTCGC
TTTTGGATCAATAGTCTTGGAAACTCATCATACATAGACAATGTTTTCGAAGATCTTCGA
GATGGATGGATGCTTTTGGAGACACTTGACAAGATCTCCCCAGGAATTGTTAATTGGAAA
ATTGCCACTAAACCTCCAATTAAGATGCCTTTCAGAAAAGTAGAAAATTGCAACCAAGTA
GTCAAGATTGGCAAACAATTGAAATTTTCCCTAGTAAATATTGCTGGAAATGACATTGTT
CAGGGGAACAAGAAGTTAATATTGGCTTACTTGTGGCAGTTAATGAGATGTAACATGCTT
CAGCTCTTAAAGAATTTGAGATTTCACTCCCATGGGAAGGAAATTACTGATGCCCACATT
TTGGAGTGGGCTAACAGCAAAGTTAGGAACTCAGGAAGCCAGAGTCATATGACAAGTTTC
AAGGATAAGAGTTTGTCAACTGGAATCTTTTTCCTGGAACTACTAAGTTCTGTTCATCCT
CGAGCTGTTAACTGGAGTCTTGTAACAAAAGGGGAAACTGAGGAACAGAAGAAGATGAAT
GCAACCTACATAATCAGTATTGCCAGGAAGCTTGGATGTTCAATATTTTTGCTGCCTGAA
GATATAATTGAGGTAAACCAAAAGATGATCCTTACGCTGACAGCAAGTATAATGTATTGG
CACTTGAAACAACCGACAGAGGACCAAAGTCTTGCATCTTCAGATTGTGATAGTAGCTCT
GTGGACACAGCCTCAACCTCAACGTTGGACGATACAGCTTCTGAGTCTTCAGCGGATGAT
ATCAGTAACAGATAA

Peptide Sequence

PEP ID

Solyc09g056170.3.1
PEP Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

MAGYVGVLVSDPWLQNQFTQVELRSLKSHFDAMKREKGCMTLADLPSQMAKLKQVGENLT
EKERESFIRDSYKCLDVDVDFEIFLRVYLKLQAHAAARMGNNVKNSSAFLKSPTSTLLHT
ISESEKASYVAHINNYLVGDEFLKKFLPIDPSTNDLFEISKDGVLICKLINVAVPGTIDE
RAINMKRMLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQL
LADLNLKKTPQLVELVDDSKDVEELMNLPPEKILLRWMNFQLKKAGYNKIVTNFSSDIKD
GEAYARLLNVLAPEYTTPSMLTVRDPSERAKLVLEHADRMGCKRYLTAKDIVEGSPNLNL
AFVAHIFQHRNGLSTEAKQIPSVETSPDEAQMSKEERSFRFWINSLGNSSYIDNVFEDLR
DGWMLLETLDKISPGIVNWKIATKPPIKMPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV
QGNKKLILAYLWQLMRCNMLQLLKNLRFHSHGKEITDAHILEWANSKVRNSGSQSHMTSF
KDKSLSTGIFFLELLSSVHPRAVNWSLVTKGETEEQKKMNATYIISIARKLGCSIFLLPE
DIIEVNQKMILTLTASIMYWHLKQPTEDQSLASSDCDSSSVDTASTSTLDDTASESSADD
ISNR*

Transcript Sequence

Transcript ID

Solyc09g056170.3.1
Transcript Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

CTAATTTTCAATTGAAGAATGGCTGGATATGTTGGTGTATTGGTATCAGATCCGTGGCTG
CAAAATCAGTTTACCCAGGTTGAGCTTCGAAGTTTAAAATCTCACTTCGACGCGATGAAG
AGAGAGAAGGGGTGTATGACCCTTGCAGACTTGCCTTCACAAATGGCGAAACTGAAACAA
GTCGGAGAGAATCTTACAGAGAAAGAAAGAGAGTCGTTTATCAGAGATTCCTATAAATGT
TTGGATGTAGACGTTGATTTCGAGATATTTCTTCGGGTCTATTTGAAACTCCAAGCACAT
GCTGCAGCAAGAATGGGAAATAATGTCAAGAACTCATCAGCTTTCCTAAAGTCTCCAACT
TCTACATTACTTCATACAATTAGTGAATCTGAGAAGGCATCATATGTTGCCCATATTAAC
AACTATCTCGTGGGAGATGAATTTTTGAAAAAATTCCTTCCTATTGATCCTTCTACAAAT
GATCTCTTTGAGATTTCCAAGGATGGAGTTCTTATATGTAAGCTTATCAATGTGGCTGTG
CCTGGAACAATTGATGAACGAGCAATAAATATGAAAAGAATGCTTAATCCATGGGAAAGG
AATGAAAATCATACTTTGTGCCTAAACTCTGCAAAGGCTATTGGATGTACTGTGGTCAAT
ATTGGGACACAAGACTTTATTGAAGGAAGGAGGCATCTTGTTCTTGGAGTAATATCTCAA
ATTATTAAGATTCAACTATTGGCAGACCTCAATCTAAAGAAAACACCTCAATTGGTGGAG
TTAGTTGATGATAGCAAGGATGTAGAAGAGTTGATGAACCTTCCTCCAGAAAAGATCTTG
CTTAGATGGATGAATTTTCAATTGAAGAAAGCTGGATACAACAAAATTGTGACAAACTTC
TCTTCTGACATAAAGGATGGAGAAGCTTATGCTCGCCTCCTAAATGTTCTAGCCCCAGAG
TACACCACTCCTTCCATGCTCACTGTAAGAGACCCTTCAGAAAGAGCAAAATTGGTTCTG
GAACATGCAGATAGGATGGGCTGCAAAAGATACTTAACAGCAAAAGATATTGTGGAAGGT
TCTCCAAATCTTAACCTTGCATTTGTGGCACATATCTTTCAGCATAGGAATGGGCTCTCA
ACTGAAGCAAAGCAGATACCGTCTGTTGAGACATCACCAGATGAAGCTCAGATGTCCAAA
GAAGAAAGATCATTTCGCTTTTGGATCAATAGTCTTGGAAACTCATCATACATAGACAAT
GTTTTCGAAGATCTTCGAGATGGATGGATGCTTTTGGAGACACTTGACAAGATCTCCCCA
GGAATTGTTAATTGGAAAATTGCCACTAAACCTCCAATTAAGATGCCTTTCAGAAAAGTA
GAAAATTGCAACCAAGTAGTCAAGATTGGCAAACAATTGAAATTTTCCCTAGTAAATATT
GCTGGAAATGACATTGTTCAGGGGAACAAGAAGTTAATATTGGCTTACTTGTGGCAGTTA
ATGAGATGTAACATGCTTCAGCTCTTAAAGAATTTGAGATTTCACTCCCATGGGAAGGAA
ATTACTGATGCCCACATTTTGGAGTGGGCTAACAGCAAAGTTAGGAACTCAGGAAGCCAG
AGTCATATGACAAGTTTCAAGGATAAGAGTTTGTCAACTGGAATCTTTTTCCTGGAACTA
CTAAGTTCTGTTCATCCTCGAGCTGTTAACTGGAGTCTTGTAACAAAAGGGGAAACTGAG
GAACAGAAGAAGATGAATGCAACCTACATAATCAGTATTGCCAGGAAGCTTGGATGTTCA
ATATTTTTGCTGCCTGAAGATATAATTGAGGTAAACCAAAAGATGATCCTTACGCTGACA
GCAAGTATAATGTATTGGCACTTGAAACAACCGACAGAGGACCAAAGTCTTGCATCTTCA
GATTGTGATAGTAGCTCTGTGGACACAGCCTCAACCTCAACGTTGGACGATACAGCTTCT
GAGTCTTCAGCGGATGATATCAGTAACAGATAACTGGGTGATTTTTCCAGATATATCATG
TGCTGAATTTTTTAGTTGAAATTTCAAAAGATTTATAGATTGTTATCACTTTGTAGAAAT
TATATCATGCTGAAAGCCTTTTCCCGAAAACAAACACGTAATGTAGATATAGTAAGAAAG
TCGTAATGAATTGGATATAGAAGGCACTGTAACGTGTGCCTCTGGTTGTATCATATCCAT
AGTGTCTTTTACGTTTTGTCATTACCTCCCTATGTAAGTTCCGCTTAGAGTTTAGGATCG
AATCAATCATTTGGAACTAGAGTAATTAAAAACATTG