Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g055660.2.1
CDS Infomation

Bromodomain (AHRD V3.3 *-* A4PP03_MEDTR)
Sequence

ATGGATTTTGGTACAATGAGGGCTAAGCTTCATGAAGGAATGTATCAGAACCTCCAACAG
TTTGAGCGTGATGCATTTCTGATTCCCAAAAATGCAATGCATTTCAACTCCTCTGGTACA
GTTTACTTCAGACAGGCTCGTGCTATATATGATCTAGCTAAGAAAGCATTTCACGTCCTA
AAAACTAATCCCAAAAACATTGAAGTAGAATTTCCAGTGAACAGACGTAGATCGATGAGA
AGATTGCAAAATGAGGCCAGAGATACAGGATATGTCATACCAGATGGTGCCCTTGATGTT
TCCTCCAAGAATATTGGACTTGGGCCTAGTGTTCCATCAACATATAGAAGAAGCAAAGAA
AGGCCTTCCCTATCCACCAAAGATGCTGCTCCGACTGACGGTGCATTCTTATTAGGTAAT
AGACATGCTCAAAGTTTTTCTTCTCTTGGTGCTGGTCGTTGTTCTGCATATGAATTTTTC
AGGCCTTCGCCTTACCATGACACTAGCTCATTTCTATGTAACCAGAATCCTGAGTCACTA
ATTCTTAACAGGAATGGTAGTTACAGAGAGAGCTTGATGTCATTTGCCAGAGACTTAGGA
CCAACAGCACAAACGGTTGCCAACGCGAAAATGCAAGGGAGCTATCCATTTCTTCTCTCT
CACACAACTAAAGGTCCTCCAACGTGCTTAGGATTCGCTGCCTTTGCACATGTACAAAAT
CAATCTAATACTGGAGTTTTAACCTCATATAAGAATCTATCTAGTCCTGTTCGAGGTTTT
TGCTCCGTTCTCAAAAGCACCAGTGATAGGATCGATGTGTGTAATGTTGCAAAGGGGGAT
GAGACTTGTAAAATAGCTGGCATGCGCAGTCTGAAAGAGCCCCTTCCTTGCACAGAATAT
TCAGAGAAGAAACATACGTCAATTTTGTGCTACAAAAGGAATGTTCATAAAGTAACAGAA
GGAGCCAAGAAAACTCTAAATGGAAGTGAGAGAAAAGAGAATTACTTGGGAACTCATATC
ATTACTATTGGGACATCTGGGGATACGAAGAAACCCGGCAGAAGAACTGCTAAGGTGGAA
GAAAATAAAGTTCTGCCAGTTGTACTAGCTCTAGAGCAATCTCATTCAAGTCTATCTGAG
GTGAAGTGGAGAAACAAGAAGAGTTCCAATTTCACATCACGTAAGACACGATCACAAAGC
AAGATTGCAGAACCCAATGTCACTGGGACAATTTCAGGTCAAACTAAAAATAAAAGCTTT
AGATCAAAGCACGAAAACAAAGCAGCTATTTGTGCTCAAAACAACAATTTTGGCAGCAGT
ATCAACCCAACTTTTCTTGAGCCAATGAGCCAGGCATCAGAGTCGAAATTGAGCAAGACT
ATTCCTGTGATGCCATTTCCAGGAATAATGAGCTCCAGGTTCACTTTTGATATGCCGTTC
TTGAAAGCTCAGCTAAATCAAATGAATCCAGTAGGGAAAAATGACATGCCTCAAGTATCA
AGACATAACATGGAGTGGTCATTGTATGGTCAGGGAAGTAATAATAGGATGGGCAGGGAA
GTAAATCTATCCGTGTCGTCTCTGCAAGACAAACCAAACAGTACTCTGCAGACCATGCCG
ACTTTCAATTATAATTATCAATCATCACATCTTTCCATAGACACTGATTTGGCCCTTCAG
CTCTGA

Peptide Sequence

PEP ID

Solyc09g055660.2.1
PEP Infomation

Bromodomain (AHRD V3.3 *-* A4PP03_MEDTR)
Sequence

MDFGTMRAKLHEGMYQNLQQFERDAFLIPKNAMHFNSSGTVYFRQARAIYDLAKKAFHVL
KTNPKNIEVEFPVNRRRSMRRLQNEARDTGYVIPDGALDVSSKNIGLGPSVPSTYRRSKE
RPSLSTKDAAPTDGAFLLGNRHAQSFSSLGAGRCSAYEFFRPSPYHDTSSFLCNQNPESL
ILNRNGSYRESLMSFARDLGPTAQTVANAKMQGSYPFLLSHTTKGPPTCLGFAAFAHVQN
QSNTGVLTSYKNLSSPVRGFCSVLKSTSDRIDVCNVAKGDETCKIAGMRSLKEPLPCTEY
SEKKHTSILCYKRNVHKVTEGAKKTLNGSERKENYLGTHIITIGTSGDTKKPGRRTAKVE
ENKVLPVVLALEQSHSSLSEVKWRNKKSSNFTSRKTRSQSKIAEPNVTGTISGQTKNKSF
RSKHENKAAICAQNNNFGSSINPTFLEPMSQASESKLSKTIPVMPFPGIMSSRFTFDMPF
LKAQLNQMNPVGKNDMPQVSRHNMEWSLYGQGSNNRMGREVNLSVSSLQDKPNSTLQTMP
TFNYNYQSSHLSIDTDLALQL*

Transcript Sequence

Transcript ID

Solyc09g055660.2.1
Transcript Infomation

Bromodomain (AHRD V3.3 *-* A4PP03_MEDTR)
Sequence

GTCGATTTTTTTAAAAAAATCCTACAATTATAGCATGGAAGAATCACATACGAGAAAATA
GTTTACTTGAGCAAAACTATCAATAAAACTAGTATATTTAAATATATGAATTATTAATTA
TTGTAAGTTAGTATTTTTTAAGGTAGCTTCCAAATTTTATTATAGAAAAAATTGCAAGAT
GAGATTGTCGGTAACATTTTATTGTTTGCTAAATCTGTTTGTCATCAGTTTTGTGTGTGA
AATTTATTTCTTGTAGTTTTGATTTTAAATAATGAATGGGTTCGTTGGATGGGTATAGAA
GTAAAAGTTTTGAGAGGAAAATGGTGGCTGGTTACTTGGTTCTGTATATGGAGTGATGAG
CATTAATGTTGTAATTATAAGTGAAGATTTGGTTGTAGTACGGACGGGAGTGTGTATATA
TAATCCGATTAAATGTAACGCATTGACAAATTTAATTGAGTAAAAGGGTGGATGTACATG
GTTGTGTGTTTAAAGGATTTCTGGTTTGAGAGATGGTGTAATAAAGAGTGAATTGTTTTT
ATCCTAATTTACAGATTTGCTCCATGTGTTAATATATATATATATATATATATGATGATG
ACGATGATGATGAAATGAAATAGTATGAACAGAAAGTTAGGAAAATGCAAAAGGGAGAGG
GCCCATCTGCATCTTCCTGCACAAGGGCAAGTATTAAGAGAAAGTTCCATCAAGTTGGGG
AGGTTAGATATTGTACTAGTTATCTTGTCAGTCACCTTTCTTTGCACATTTACTCTCTAT
GTCTAATTACTTATTACCTCTTGCAGGACAAGGGCCGCACCGCACGTTCATCCAAGTTCA
ATAGTAACTCTGATTTCGACATATATCTTATATAATTTATTTATTCAATTTTGACAGTTT
TATACTTATGTTTATCTATCAGGTAAACCAACAAAGTTGCCAGAAAAACGTATACTACAA
CTAATTCTCGACGTTCTGCAAAGGAGGGACACCTATGAAATATTTGCAGAACCAGTTGAT
CCCACTGAGGTGGAAGATTACTACAAAATCATTAAAGAGCCTATGGATTTTGGTACAATG
AGGGCTAAGCTTCATGAAGGAATGTATCAGAACCTCCAACAGTTTGAGCGTGATGCATTT
CTGATTCCCAAAAATGCAATGCATTTCAACTCCTCTGGTACAGTTTACTTCAGACAGGCT
CGTGCTATATATGATCTAGCTAAGAAAGCATTTCACGTCCTAAAAACTAATCCCAAAAAC
ATTGAAGTAGAATTTCCAGTGAACAGACGTAGATCGATGAGAAGATTGCAAAATGAGGCC
AGAGATACAGGATATGTCATACCAGATGGTGCCCTTGATGTTTCCTCCAAGAATATTGGA
CTTGGGCCTAGTGTTCCATCAACATATAGAAGAAGCAAAGAAAGGCCTTCCCTATCCACC
AAAGATGCTGCTCCGACTGACGGTGCATTCTTATTAGGTAATAGACATGCTCAAAGTTTT
TCTTCTCTTGGTGCTGGTCGTTGTTCTGCATATGAATTTTTCAGGCCTTCGCCTTACCAT
GACACTAGCTCATTTCTATGTAACCAGAATCCTGAGTCACTAATTCTTAACAGGAATGGT
AGTTACAGAGAGAGCTTGATGTCATTTGCCAGAGACTTAGGACCAACAGCACAAACGGTT
GCCAACGCGAAAATGCAAGGGAGCTATCCATTTCTTCTCTCTCACACAACTAAAGGTCCT
CCAACGTGCTTAGGATTCGCTGCCTTTGCACATGTACAAAATCAATCTAATACTGGAGTT
TTAACCTCATATAAGAATCTATCTAGTCCTGTTCGAGGTTTTTGCTCCGTTCTCAAAAGC
ACCAGTGATAGGATCGATGTGTGTAATGTTGCAAAGGGGGATGAGACTTGTAAAATAGCT
GGCATGCGCAGTCTGAAAGAGCCCCTTCCTTGCACAGAATATTCAGAGAAGAAACATACG
TCAATTTTGTGCTACAAAAGGAATGTTCATAAAGTAACAGAAGGAGCCAAGAAAACTCTA
AATGGAAGTGAGAGAAAAGAGAATTACTTGGGAACTCATATCATTACTATTGGGACATCT
GGGGATACGAAGAAACCCGGCAGAAGAACTGCTAAGGTGGAAGAAAATAAAGTTCTGCCA
GTTGTACTAGCTCTAGAGCAATCTCATTCAAGTCTATCTGAGGTGAAGTGGAGAAACAAG
AAGAGTTCCAATTTCACATCACGTAAGACACGATCACAAAGCAAGATTGCAGAACCCAAT
GTCACTGGGACAATTTCAGGTCAAACTAAAAATAAAAGCTTTAGATCAAAGCACGAAAAC
AAAGCAGCTATTTGTGCTCAAAACAACAATTTTGGCAGCAGTATCAACCCAACTTTTCTT
GAGCCAATGAGCCAGGCATCAGAGTCGAAATTGAGCAAGACTATTCCTGTGATGCCATTT
CCAGGAATAATGAGCTCCAGGTTCACTTTTGATATGCCGTTCTTGAAAGCTCAGCTAAAT
CAAATGAATCCAGTAGGGAAAAATGACATGCCTCAAGTATCAAGACATAACATGGAGTGG
TCATTGTATGGTCAGGGAAGTAATAATAGGATGGGCAGGGAAGTAAATCTATCCGTGTCG
TCTCTGCAAGACAAACCAAACAGTACTCTGCAGACCATGCCGACTTTCAATTATAATTAT
CAATCATCACATCTTTCCATAGACACTGATTTGGCCCTTCAGCTCTGA