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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g047840.3.1
CDS Infomation

Autophagy-related protein 10 (AHRD V3.3 *** A0A0K0XR68_TOBAC)
Sequence

ATGACATCTATCTCCTCCTCATGGGATGGCACTATTACCTCCACTCAATTTCACAATGCT
GCTTCTACTTTTTCTGAGATATGGAACAACTTTGATCTAGGGTTTCCTCACTGGTCATGG
ATCAACTTTCCAAATAAACCAGGTTTTGCTGCTACCAAGCTACAAGGATATTTATCATTG
GAGAATATGATTCTTCCCATAACAACTGAGGAAGAATGTGTTCTAGCTGGAACAGAAGAT
TTGACTTGCTCTAACGAAGATTCATTTGATGATACTGCCATATTGGTTCAAAAGGACAGC
AAAGAAAGACATCATTACGACTTTCATGTCATCTACAGTTCCTCTTTTAGGGTTCCAGTA
CTTTATTTCCGTGCATACTGCAGTGATGGAGAACCCTTGGCAATAGAAGACCTGGAAAAG
GACTTTCCTGCCTATACTGCGCAGGAACTGGCAGTATCTAAATGGACCTTTATTACTCGG
GAGGAGCACCCGTACCTGAATCGGCCATGGTACACATTGCATCCATGTGGGACTAGTGAG
TGGATGAAGCTGCTTTTCAGTAATGAACCTTCAGTTGTGAATCAAGGTGGAGTTGCAATT
GAGAAATATCTAACCTCATGGTTTTCAGTTGTATCACCTGTCTTTGGTTTTAAAATCCCC
TTAAAATTCTCTACATTTATGAACTCTGGAAATGTTGCTACTGTAATATAG

Peptide Sequence

PEP ID

Solyc09g047840.3.1
PEP Infomation

Autophagy-related protein 10 (AHRD V3.3 *** A0A0K0XR68_TOBAC)
Sequence

MTSISSSWDGTITSTQFHNAASTFSEIWNNFDLGFPHWSWINFPNKPGFAATKLQGYLSL
ENMILPITTEEECVLAGTEDLTCSNEDSFDDTAILVQKDSKERHHYDFHVIYSSSFRVPV
LYFRAYCSDGEPLAIEDLEKDFPAYTAQELAVSKWTFITREEHPYLNRPWYTLHPCGTSE
WMKLLFSNEPSVVNQGGVAIEKYLTSWFSVVSPVFGFKIPLKFSTFMNSGNVATVI*

Transcript Sequence

Transcript ID

Solyc09g047840.3.1
Transcript Infomation

Autophagy-related protein 10 (AHRD V3.3 *** A0A0K0XR68_TOBAC)
Sequence

AGCATAATTTTCTCGTCTTTCTTTGTGTATATATTAGCAGATCGCAGATTGAGTTAGAGA
TATTGTATTGCAGGCAAAAATGACATCTATCTCCTCCTCATGGGATGGCACTATTACCTC
CACTCAATTTCACAATGCTGCTTCTACTTTTTCTGAGATATGGAACAACTTTGATCTAGG
GTTTCCTCACTGGTCATGGATCAACTTTCCAAATAAACCAGGTTTTGCTGCTACCAAGCT
ACAAGGATATTTATCATTGGAGAATATGATTCTTCCCATAACAACTGAGGAAGAATGTGT
TCTAGCTGGAACAGAAGATTTGACTTGCTCTAACGAAGATTCATTTGATGATACTGCCAT
ATTGGTTCAAAAGGACAGCAAAGAAAGACATCATTACGACTTTCATGTCATCTACAGTTC
CTCTTTTAGGGTTCCAGTACTTTATTTCCGTGCATACTGCAGTGATGGAGAACCCTTGGC
AATAGAAGACCTGGAAAAGGACTTTCCTGCCTATACTGCGCAGGAACTGGCAGTATCTAA
ATGGACCTTTATTACTCGGGAGGAGCACCCGTACCTGAATCGGCCATGGTACACATTGCA
TCCATGTGGGACTAGTGAGTGGATGAAGCTGCTTTTCAGTAATGAACCTTCAGTTGTGAA
TCAAGGTGGAGTTGCAATTGAGAAATATCTAACCTCATGGTTTTCAGTTGTATCACCTGT
CTTTGGTTTTAAAATCCCCTTAAAATTCTCTACATTTATGAACTCTGGAAATGTTGCTAC
TGTAATATAGATTTAGTTTTTTCTTTTCAATGTAAATGTTTAGAATGAAATCATCTGCTG
AGATGCAAAATTGGTTACATAAAACTTATCTTTAATGTGAATACCCCAGGCCAATCTAGA
TTTTAAATTT