Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g042250.1.1
CDS Infomation	LOW QUALITY:Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061EQ47_THECC)
Sequence	ATGCCTTGTTCAGCTCTCTCCCCTATCCAGCAACGTCTGGTTTTCTCTGTTACGCCTCTA CTATCCACTTCTCTACACAAAAATGGAAGCCAGGTTTACTTTGCTCATAAACAAACTTTC ACTCCTCTTTTTCTTGATACTATCAATTCAAAAAATGGTGGGTTTCAAACCATATCTGAT TTCAATCATCAACTTACATCTTTAGTTTTAGCAGATGAGTTTGAACTAGCTTTGAAACTG ACCTCATCTTCATCATCTTATGGATTGACACCCAATGAATACACATACTCAATTTGGGTC AATTTGTACTGCAAAATACATGACCCTGAAACAGCCAAATCCATTTTAGATCACATGCTG GAGCATGGGTTTCAACCAAAAGTTGAAACTTTTACAACTCTCATCAGTTCTTTCTGCAAA GCTGGAAAATTACAACAAGCCTATCAGGTTTTTGATGTTATGGGTCAAATTGGATGTGAA CCCACAATTCATACTTACAATTGCTTGCTTAAAGGTCTTTGTTTTCTTGGTAGAGTAGAG GAAGCCTATGACTTGCTTATAAATATCAAGAGATCTAAGATAAAACCTGATATTTATACT TATACTGCTGTTATGGATGGATTCTGTAAGGTGGGTAGGTCTAATGAGGCATTGGAATTG CTTGAAGAAGCTATGGAAATGGGGTTGACACCTAATGTAGTTACTTACAATACTCTGTTT AATGGGTATTTTAAAGAAGGCAGACCTTTAGATGGGATTGGTTTGTTGAGGAAAATGAAA GAGGAAAAATGTATGCCTGATCATATTACTTACAGCACATTGTTACATGGGTTGTTGAAA TGGGGAAAAATTGAAGTTGCTTTATCCATTTACAAGGAGATGTTGAAACTTGAATTTGAG ATTGATGAGAGGATGATGAATACCTTGTTGAGAGGGTTATGCAGGCTATCTAGGAAACAG AAAGAACTCTTACAAGATGCATATCAAGTGTTTGTAAAAATGCGGAGCCGAAAACTGGTT GTAGATCCTGTTGGTTATGAGTTGGTTATTGAAGCTTTTTGTAGTGGTAACAAGCTGGAT AAAGCACTGGAGAATTTGTATGAGATGATTAGAATTGGGTATTCTCCTAAGGCATTCACG TTCTCTAATCTCATTCGTGTACTTTGTTTGGAGGGAGAAGTTGAGAAGGCGTTGTTAGTT TTTGTTCCTATGATGAAAAACGGAAAGTCTCCTAGTAAAGTTCCATTTAACTTGTTGATC AATGAGCTGAATCAAAAAGAAATGATATTGAATGCTTGTTACTTGTATGGTGTAGCATTG AAATGTGGGGTGGTGACAAGAAATAAACCTGTAGTATGTTTGCGTGGGGATGAGGTTTCG AATTGA

Peptide Sequence

PEP ID	Solyc09g042250.1.1
PEP Infomation	LOW QUALITY:Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061EQ47_THECC)
Sequence	MPCSALSPIQQRLVFSVTPLLSTSLHKNGSQVYFAHKQTFTPLFLDTINSKNGGFQTISD FNHQLTSLVLADEFELALKLTSSSSSYGLTPNEYTYSIWVNLYCKIHDPETAKSILDHML EHGFQPKVETFTTLISSFCKAGKLQQAYQVFDVMGQIGCEPTIHTYNCLLKGLCFLGRVE EAYDLLINIKRSKIKPDIYTYTAVMDGFCKVGRSNEALELLEEAMEMGLTPNVVTYNTLF NGYFKEGRPLDGIGLLRKMKEEKCMPDHITYSTLLHGLLKWGKIEVALSIYKEMLKLEFE IDERMMNTLLRGLCRLSRKQKELLQDAYQVFVKMRSRKLVVDPVGYELVIEAFCSGNKLD KALENLYEMIRIGYSPKAFTFSNLIRVLCLEGEVEKALLVFVPMMKNGKSPSKVPFNLLI NELNQKEMILNACYLYGVALKCGVVTRNKPVVCLRGDEVSN*

Transcript Sequence

Transcript ID	Solyc09g042250.1.1
Transcript Infomation	LOW QUALITY:Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061EQ47_THECC)
Sequence	ATGCCTTGTTCAGCTCTCTCCCCTATCCAGCAACGTCTGGTTTTCTCTGTTACGCCTCTA CTATCCACTTCTCTACACAAAAATGGAAGCCAGGTTTACTTTGCTCATAAACAAACTTTC ACTCCTCTTTTTCTTGATACTATCAATTCAAAAAATGGTGGGTTTCAAACCATATCTGAT TTCAATCATCAACTTACATCTTTAGTTTTAGCAGATGAGTTTGAACTAGCTTTGAAACTG ACCTCATCTTCATCATCTTATGGATTGACACCCAATGAATACACATACTCAATTTGGGTC AATTTGTACTGCAAAATACATGACCCTGAAACAGCCAAATCCATTTTAGATCACATGCTG GAGCATGGGTTTCAACCAAAAGTTGAAACTTTTACAACTCTCATCAGTTCTTTCTGCAAA GCTGGAAAATTACAACAAGCCTATCAGGTTTTTGATGTTATGGGTCAAATTGGATGTGAA CCCACAATTCATACTTACAATTGCTTGCTTAAAGGTCTTTGTTTTCTTGGTAGAGTAGAG GAAGCCTATGACTTGCTTATAAATATCAAGAGATCTAAGATAAAACCTGATATTTATACT TATACTGCTGTTATGGATGGATTCTGTAAGGTGGGTAGGTCTAATGAGGCATTGGAATTG CTTGAAGAAGCTATGGAAATGGGGTTGACACCTAATGTAGTTACTTACAATACTCTGTTT AATGGGTATTTTAAAGAAGGCAGACCTTTAGATGGGATTGGTTTGTTGAGGAAAATGAAA GAGGAAAAATGTATGCCTGATCATATTACTTACAGCACATTGTTACATGGGTTGTTGAAA TGGGGAAAAATTGAAGTTGCTTTATCCATTTACAAGGAGATGTTGAAACTTGAATTTGAG ATTGATGAGAGGATGATGAATACCTTGTTGAGAGGGTTATGCAGGCTATCTAGGAAACAG AAAGAACTCTTACAAGATGCATATCAAGTGTTTGTAAAAATGCGGAGCCGAAAACTGGTT GTAGATCCTGTTGGTTATGAGTTGGTTATTGAAGCTTTTTGTAGTGGTAACAAGCTGGAT AAAGCACTGGAGAATTTGTATGAGATGATTAGAATTGGGTATTCTCCTAAGGCATTCACG TTCTCTAATCTCATTCGTGTACTTTGTTTGGAGGGAGAAGTTGAGAAGGCGTTGTTAGTT TTTGTTCCTATGATGAAAAACGGAAAGTCTCCTAGTAAAGTTCCATTTAACTTGTTGATC AATGAGCTGAATCAAAAAGAAATGATATTGAATGCTTGTTACTTGTATGGTGTAGCATTG AAATGTGGGGTGGTGACAAGAAATAAACCTGTAGTATGTTTGCGTGGGGATGAGGTTTCG AATTGA