Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g031650.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G58030.4)
Sequence	ATGGGTTTTGATATTGAATGCATAATTGACATCCATACCTATCCTGGAGAGTATTTCTGT CCTGTTTGTCGCACACTCATATTTCCTAATGAAGCCGTCCAATCACAGTGCACCCATCTC TACTGCAAACCTTGTCTGGCACATGTTGCCAATGGGAGCCGAGCCTGTCCTTATGATGGA TACTTGGTGACTGAAGCAGACTCTAAAGCCCTTATCGAGTCGGACAAGAAACTTGCTGAA AGCATAGGCAGAGTTAAAGTGCGTTGTCTCTATCACAGAAGTGGATGCACATGGGAAGGT TCCTTCTCTGATTGCACTTCCCATTGTTCTGGCTGTTCCTTTGGCGACTCCCCAGTTGTA TGCAATAGATGTGGAGTCCAGATTGTGCATCGACAAGTGCATGAGCATGCCCTGAGTTGC CCTGGTGTATATCCTGCACAACAGGCAACTCATGGTGCCGAGGATAATCCTAGCTCTGGT GCAGCCACCACTGCTGCTGGTACCGACTTGAATAAAACTAAGGCTCATTCAGGAACTCCG GCATCACAGACACCAAACCCTCAAACCACAACTGCTTCTCTGCTTCCTGGACAAGATCCC AATCAGCAAACAAGTGCCAGCTCTCAGGCTCTTGCTACTGCTTCAGCTGGTGTGCCTACT TCAGAGCAGTGGTATCAGCAACAGTATCAGCAGTATTATCAGCAATATGCTGGATATGAG CCTTATCAACAACAAACTTATCAACAATACTATCCTTATCAGCAACAGTCCCTCCAACAA TATCAGCAACAACCTCACATTTACATGCAGCCACCAGCACAACCCCAGACCCCGGCCCCA GCCCAGCCGCAGCCCCAGCCGCAGCCACTTAATCCTCAATCTCATACTCAAATGCAAGCT CTACCTAAAGGGCCAACTCAACCACAGGTTCAACCTCTGGCACAACAGCATCAAAATCAG GTTCAAGTCAACCCAGTACAGCAGCTCCCACCTACTATGCAACCTCATGCCCAAATTCCA TCACAAATATATCCAGCTTCTCGTGCTCATCCACCTACTCAGCCTCCGCCATATTCACAG ACCTATTCAATGCAGCCTCATTCACAACAATATGTGCAAGTGCCACAGTATCAGCAGCCT CCTGCCCAGGTTCATCCCCCTCCATCCTCTCAAGCCCAACCACATCCTCCTGTGCAAGCA CAACCTCATTCACAACTCCAGCCGCAAATAAATGTGCAACATCATCCACAATCTCATGGC CAATTGCGCCCTCCTCAGGTCGGCCAGCCTGCTCATGCACAGGGTCAGACCCTCCCTTCA ACAGCCAATGCAGTTTCAGGTTTCCATTCCTATCCACAAACCCAGCTTACGCAGCAAGTG GCTATAGGGATGTCACAGCAACCTCCAATGTACCCGCATCCTACTAGTGGGTCTATGAGT CTGGTTCAAACTCATGGTCAGGTTCCTCAACCTCCCTTAATGCGCCCACCTCTGGGTCTA ATCGGCAATCAGCAACCGGGGCTGGTACCTTCTCAAGGTCAAGTTCCTGCACAATCTCAA CTTTATCCTATTGCTCAGCAAGCAGGACACTCAATTCAGCAACATCCTGGTCAGTCTAAT CAACAGCCAATGTCTCAACAGTACAGTCATCATCATACATTTCCTGGTCCATTTCCAAGC CAATCTCACCAGCAAGGTCATTTTACTCACCAGCAGCCGTTGCAGTCCCAATTTCGCCCA CAAGGTCTTCCTAATGTGGTGCCTCAAAGTTTGCATGGGTATATTCAACCGCAGCAAAAT GCCACCTTACCACCTCCTCCACAGCCTCAACAATCTCAAGCATATATAGGAAGGCCTGGG ATGCAAAATCATGTCCAGTCGATTTCACAGGCTCATGGTGGATATAATACTACAGCCCAG GTTAGACCTGTCCAGCCTGCTTTAAGCCAGCCGCAAATAAATCCAAGTTATGGGAACTAC ACGGGCAATGAGCATGAGTTGGTGGATCAGAAGAAACGGTTAGCCCTAGAAAGTAAAGGT GATCTGTTACCTGACAAAACTGCTGGAAGGAAAGAAGCGGGAGTTCCTTCCCAGGACAAT GCTCAAAAGGATCTAAATTCTCTTCCAGCCAAATCAATTGATGATGAGTACAGACAGAGG GCCAGCAGTGATATAGATGTCCGTAGGGGTGATTCAGATGAGCTTATGGACAAAAGAACT GTCAAGAAAGAGGAAGATGACACTTTTTTGAAGCCTAAATCTGCTGCCAAATCAGCTGAT GCAACAGTTAAACCAGACAAAGATGCCTGTGATGATGTTCCAAAAGAACTGGACCAGACT CTGGAAAAGCATGGATCTTCTGATGCTACCGATGGTTCGATTAAGAATCTGAACTCTGGA AGAGATTCACATGACGCTACCACTGACGGAGGGGTTTTTCAGCAGTATGGGCATGGGATG CCACAACCGAAATATGGACCGTCTACTCAGCAAAGGCCCGTTGGTCCTATGATAATATCA CCAGTGCGACCTGCAGGCAGTACTTCTCATGGCCAACTCCCTGGATATCCCCCCACTGCA ATGATGCCTTCAGGGAATGTACCTCAGGCTGGTCAGCCATTGAATTCTCTTGATCATCGT CCACAATTCTTGAAGCAGCCTAGTAGTGCCCCCCTTGGTGGTATCCCTGGTCCAGGGTCT ATTACAACCTTTGCTAGGGGGCATGGTCATTTTCCTCCACCAGGTGAGTTCCCAGAGGGG ATTACGGGAGTAGGAAGAGCACTGTTAAGTGGTGCTGAAATTCCTAGTGGAACACAACAC TCTGTTAATCCAGCAGAGGCTGAAATGTTTCAAAACCAAAGGGTGAATTGTTTTGAAGGA AATCAATCAAACCCATTTTCCTCAGGGTCTTTTGAGAAGGTTCCATTTGGCCAACCTAGA AGTATGGAATCTGCTAGGGATAAAAGGTTGAAGGCGCCTATGGGGGAGCATTTAATTCCT TTACCGGTGCCTTCTGATCAAGGATCACGGCCACATGACAAACCTCCTCACGGATTAGGA TATGATTCTGGATCAAAATTTGAGGCCAGTACCGGGGTTCCACCGAACAGATTATTGCCT CCACATCATCCTCCTGGTTCGATGCATTTCAAGGATAGTGGAGAAAGAGAAGCACCACTT GGTCCTCATGACGATGATAGAAAAAGAGGAGGATCTGGATTCGGTGTGCATCATTTGGAT TATTTGTCTGCCAGAAACCCTGATGGGGAGTTATTTAACATTCCACAACGTGGATTTGTA AGTCACTCAGGTTTTGATGATACTGGTGGCAGAGAGCCCCGTCAATTTATTGAAGGGCCA GGACATTTCAATTTACCTTCCAATCTAGCTGGCGGCTTATACTCTAATAGTAGGTTCCAA GCTTTGCCTGGCCATCCACATGGAGTAGAGACTGATGGTCTTGGGGATTTGAGAGGTGGT GAGCATACTACCTTTGGTCGTCCTTACAAACATGTCCAGAGTGGTGATCTGTTTGGAAAA GACATGCCGAGTCATTTGCATCATGATGAGTCTTTGGATCCTCCGAAATTACCAAGTCAT TTACGTTTTGATAAACCTGGTGGCTTTGGTTCCTTCGCTGGCCGTGCTTATATGGGGGAG TTGTCTGGGTTTGGAGATATTCCTGGTTTTGATGAATCAGTTGGACGCAACAAACCTGGT ATGCCACAGTTTGGGGAGCCTGGCTTCAGGAGCAGGTATCCTGTTCCGGGGTATCCGAAT CACGGACTTTATGCAGGTGATGTGGACTCCTTTGATAGACCAAGAAAGAGGAAGCCCACG AGTATGGGATGGTGCCGCATTTGCAAGGTTGATTGTGAAACCGTTGAGGGCCTAGATATG CATTCACAGACAAGAGAGCACCAGGATATGGCTATGGATATGGTCAGGTCTATCAAGGAG CAAAACCGAATGAAACAGAAGACTTTTAGTGATCGTCCTTCAGTTGAAGAGAAAGGGAGG ACTAGAAAGGCAGTGTTCGAGAGCCGTGGTAGAAAGACTTGA

Peptide Sequence

PEP ID	Solyc09g031650.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G58030.4)
Sequence	MGFDIECIIDIHTYPGEYFCPVCRTLIFPNEAVQSQCTHLYCKPCLAHVANGSRACPYDG YLVTEADSKALIESDKKLAESIGRVKVRCLYHRSGCTWEGSFSDCTSHCSGCSFGDSPVV CNRCGVQIVHRQVHEHALSCPGVYPAQQATHGAEDNPSSGAATTAAGTDLNKTKAHSGTP ASQTPNPQTTTASLLPGQDPNQQTSASSQALATASAGVPTSEQWYQQQYQQYYQQYAGYE PYQQQTYQQYYPYQQQSLQQYQQQPHIYMQPPAQPQTPAPAQPQPQPQPLNPQSHTQMQA LPKGPTQPQVQPLAQQHQNQVQVNPVQQLPPTMQPHAQIPSQIYPASRAHPPTQPPPYSQ TYSMQPHSQQYVQVPQYQQPPAQVHPPPSSQAQPHPPVQAQPHSQLQPQINVQHHPQSHG QLRPPQVGQPAHAQGQTLPSTANAVSGFHSYPQTQLTQQVAIGMSQQPPMYPHPTSGSMS LVQTHGQVPQPPLMRPPLGLIGNQQPGLVPSQGQVPAQSQLYPIAQQAGHSIQQHPGQSN QQPMSQQYSHHHTFPGPFPSQSHQQGHFTHQQPLQSQFRPQGLPNVVPQSLHGYIQPQQN ATLPPPPQPQQSQAYIGRPGMQNHVQSISQAHGGYNTTAQVRPVQPALSQPQINPSYGNY TGNEHELVDQKKRLALESKGDLLPDKTAGRKEAGVPSQDNAQKDLNSLPAKSIDDEYRQR ASSDIDVRRGDSDELMDKRTVKKEEDDTFLKPKSAAKSADATVKPDKDACDDVPKELDQT LEKHGSSDATDGSIKNLNSGRDSHDATTDGGVFQQYGHGMPQPKYGPSTQQRPVGPMIIS PVRPAGSTSHGQLPGYPPTAMMPSGNVPQAGQPLNSLDHRPQFLKQPSSAPLGGIPGPGS ITTFARGHGHFPPPGEFPEGITGVGRALLSGAEIPSGTQHSVNPAEAEMFQNQRVNCFEG NQSNPFSSGSFEKVPFGQPRSMESARDKRLKAPMGEHLIPLPVPSDQGSRPHDKPPHGLG YDSGSKFEASTGVPPNRLLPPHHPPGSMHFKDSGEREAPLGPHDDDRKRGGSGFGVHHLD YLSARNPDGELFNIPQRGFVSHSGFDDTGGREPRQFIEGPGHFNLPSNLAGGLYSNSRFQ ALPGHPHGVETDGLGDLRGGEHTTFGRPYKHVQSGDLFGKDMPSHLHHDESLDPPKLPSH LRFDKPGGFGSFAGRAYMGELSGFGDIPGFDESVGRNKPGMPQFGEPGFRSRYPVPGYPN HGLYAGDVDSFDRPRKRKPTSMGWCRICKVDCETVEGLDMHSQTREHQDMAMDMVRSIKE QNRMKQKTFSDRPSVEEKGRTRKAVFESRGRKT*

Transcript Sequence

Transcript ID	Solyc09g031650.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 --* AT3G58030.4)
Sequence	AATATTTTTATTTTATATTCTACTTAGGTTTTTAAGTGTGCTGGTGCTTCTCACAAGTTA AAAAAAGCATTTTACACCGTCTTCATCAGATCTGGTTCTCTTTTTGATTTTGCACATCAA GAGCAGCTTTCATCTACCAGAAGCATAATTGCATTGATGTGTTGTGGAAAACTTTCTTAC TCCTGAGTTGATATGGGTTTTGATATTGAATGCATAATTGACATCCATACCTATCCTGGA GAGTATTTCTGTCCTGTTTGTCGCACACTCATATTTCCTAATGAAGCCGTCCAATCACAG TGCACCCATCTCTACTGCAAACCTTGTCTGGCACATGTTGCCAATGGGAGCCGAGCCTGT CCTTATGATGGATACTTGGTGACTGAAGCAGACTCTAAAGCCCTTATCGAGTCGGACAAG AAACTTGCTGAAAGCATAGGCAGAGTTAAAGTGCGTTGTCTCTATCACAGAAGTGGATGC ACATGGGAAGGTTCCTTCTCTGATTGCACTTCCCATTGTTCTGGCTGTTCCTTTGGCGAC TCCCCAGTTGTATGCAATAGATGTGGAGTCCAGATTGTGCATCGACAAGTGCATGAGCAT GCCCTGAGTTGCCCTGGTGTATATCCTGCACAACAGGCAACTCATGGTGCCGAGGATAAT CCTAGCTCTGGTGCAGCCACCACTGCTGCTGGTACCGACTTGAATAAAACTAAGGCTCAT TCAGGAACTCCGGCATCACAGACACCAAACCCTCAAACCACAACTGCTTCTCTGCTTCCT GGACAAGATCCCAATCAGCAAACAAGTGCCAGCTCTCAGGCTCTTGCTACTGCTTCAGCT GGTGTGCCTACTTCAGAGCAGTGGTATCAGCAACAGTATCAGCAGTATTATCAGCAATAT GCTGGATATGAGCCTTATCAACAACAAACTTATCAACAATACTATCCTTATCAGCAACAG TCCCTCCAACAATATCAGCAACAACCTCACATTTACATGCAGCCACCAGCACAACCCCAG ACCCCGGCCCCAGCCCAGCCGCAGCCCCAGCCGCAGCCACTTAATCCTCAATCTCATACT CAAATGCAAGCTCTACCTAAAGGGCCAACTCAACCACAGGTTCAACCTCTGGCACAACAG CATCAAAATCAGGTTCAAGTCAACCCAGTACAGCAGCTCCCACCTACTATGCAACCTCAT GCCCAAATTCCATCACAAATATATCCAGCTTCTCGTGCTCATCCACCTACTCAGCCTCCG CCATATTCACAGACCTATTCAATGCAGCCTCATTCACAACAATATGTGCAAGTGCCACAG TATCAGCAGCCTCCTGCCCAGGTTCATCCCCCTCCATCCTCTCAAGCCCAACCACATCCT CCTGTGCAAGCACAACCTCATTCACAACTCCAGCCGCAAATAAATGTGCAACATCATCCA CAATCTCATGGCCAATTGCGCCCTCCTCAGGTCGGCCAGCCTGCTCATGCACAGGGTCAG ACCCTCCCTTCAACAGCCAATGCAGTTTCAGGTTTCCATTCCTATCCACAAACCCAGCTT ACGCAGCAAGTGGCTATAGGGATGTCACAGCAACCTCCAATGTACCCGCATCCTACTAGT GGGTCTATGAGTCTGGTTCAAACTCATGGTCAGGTTCCTCAACCTCCCTTAATGCGCCCA CCTCTGGGTCTAATCGGCAATCAGCAACCGGGGCTGGTACCTTCTCAAGGTCAAGTTCCT GCACAATCTCAACTTTATCCTATTGCTCAGCAAGCAGGACACTCAATTCAGCAACATCCT GGTCAGTCTAATCAACAGCCAATGTCTCAACAGTACAGTCATCATCATACATTTCCTGGT CCATTTCCAAGCCAATCTCACCAGCAAGGTCATTTTACTCACCAGCAGCCGTTGCAGTCC CAATTTCGCCCACAAGGTCTTCCTAATGTGGTGCCTCAAAGTTTGCATGGGTATATTCAA CCGCAGCAAAATGCCACCTTACCACCTCCTCCACAGCCTCAACAATCTCAAGCATATATA GGAAGGCCTGGGATGCAAAATCATGTCCAGTCGATTTCACAGGCTCATGGTGGATATAAT ACTACAGCCCAGGTTAGACCTGTCCAGCCTGCTTTAAGCCAGCCGCAAATAAATCCAAGT TATGGGAACTACACGGGCAATGAGCATGAGTTGGTGGATCAGAAGAAACGGTTAGCCCTA GAAAGTAAAGGTGATCTGTTACCTGACAAAACTGCTGGAAGGAAAGAAGCGGGAGTTCCT TCCCAGGACAATGCTCAAAAGGATCTAAATTCTCTTCCAGCCAAATCAATTGATGATGAG TACAGACAGAGGGCCAGCAGTGATATAGATGTCCGTAGGGGTGATTCAGATGAGCTTATG GACAAAAGAACTGTCAAGAAAGAGGAAGATGACACTTTTTTGAAGCCTAAATCTGCTGCC AAATCAGCTGATGCAACAGTTAAACCAGACAAAGATGCCTGTGATGATGTTCCAAAAGAA CTGGACCAGACTCTGGAAAAGCATGGATCTTCTGATGCTACCGATGGTTCGATTAAGAAT CTGAACTCTGGAAGAGATTCACATGACGCTACCACTGACGGAGGGGTTTTTCAGCAGTAT GGGCATGGGATGCCACAACCGAAATATGGACCGTCTACTCAGCAAAGGCCCGTTGGTCCT ATGATAATATCACCAGTGCGACCTGCAGGCAGTACTTCTCATGGCCAACTCCCTGGATAT CCCCCCACTGCAATGATGCCTTCAGGGAATGTACCTCAGGCTGGTCAGCCATTGAATTCT CTTGATCATCGTCCACAATTCTTGAAGCAGCCTAGTAGTGCCCCCCTTGGTGGTATCCCT GGTCCAGGGTCTATTACAACCTTTGCTAGGGGGCATGGTCATTTTCCTCCACCAGGTGAG TTCCCAGAGGGGATTACGGGAGTAGGAAGAGCACTGTTAAGTGGTGCTGAAATTCCTAGT GGAACACAACACTCTGTTAATCCAGCAGAGGCTGAAATGTTTCAAAACCAAAGGGTGAAT TGTTTTGAAGGAAATCAATCAAACCCATTTTCCTCAGGGTCTTTTGAGAAGGTTCCATTT GGCCAACCTAGAAGTATGGAATCTGCTAGGGATAAAAGGTTGAAGGCGCCTATGGGGGAG CATTTAATTCCTTTACCGGTGCCTTCTGATCAAGGATCACGGCCACATGACAAACCTCCT CACGGATTAGGATATGATTCTGGATCAAAATTTGAGGCCAGTACCGGGGTTCCACCGAAC AGATTATTGCCTCCACATCATCCTCCTGGTTCGATGCATTTCAAGGATAGTGGAGAAAGA GAAGCACCACTTGGTCCTCATGACGATGATAGAAAAAGAGGAGGATCTGGATTCGGTGTG CATCATTTGGATTATTTGTCTGCCAGAAACCCTGATGGGGAGTTATTTAACATTCCACAA CGTGGATTTGTAAGTCACTCAGGTTTTGATGATACTGGTGGCAGAGAGCCCCGTCAATTT ATTGAAGGGCCAGGACATTTCAATTTACCTTCCAATCTAGCTGGCGGCTTATACTCTAAT AGTAGGTTCCAAGCTTTGCCTGGCCATCCACATGGAGTAGAGACTGATGGTCTTGGGGAT TTGAGAGGTGGTGAGCATACTACCTTTGGTCGTCCTTACAAACATGTCCAGAGTGGTGAT CTGTTTGGAAAAGACATGCCGAGTCATTTGCATCATGATGAGTCTTTGGATCCTCCGAAA TTACCAAGTCATTTACGTTTTGATAAACCTGGTGGCTTTGGTTCCTTCGCTGGCCGTGCT TATATGGGGGAGTTGTCTGGGTTTGGAGATATTCCTGGTTTTGATGAATCAGTTGGACGC AACAAACCTGGTATGCCACAGTTTGGGGAGCCTGGCTTCAGGAGCAGGTATCCTGTTCCG GGGTATCCGAATCACGGACTTTATGCAGGTGATGTGGACTCCTTTGATAGACCAAGAAAG AGGAAGCCCACGAGTATGGGATGGTGCCGCATTTGCAAGGTTGATTGTGAAACCGTTGAG GGCCTAGATATGCATTCACAGACAAGAGAGCACCAGGATATGGCTATGGATATGGTCAGG TCTATCAAGGAGCAAAACCGAATGAAACAGAAGACTTTTAGTGATCGTCCTTCAGTTGAA GAGAAAGGGAGGACTAGAAAGGCAGTGTTCGAGAGCCGTGGTAGAAAGACTTGAGCTTGG GATAGTAGATAGGAAGTGAAAGGCTGTGTTTGATGGTTGTAACTAAGCCTTCAGTCAAGC ATTTGCACCGCAATGTAGGTGATTAGCTTTACAATCTTTCTTCTTCTTCTGGGGGTTTTA TCCTAGCTTTGTCATTTCAGGTTGCCGCCCTGTTGTTGGAAGATGGTTTGGATTGGAAGT TTCTGTGGCAGTTAAGTTGTTTTGCCCATGGTTTTGAAAACTTATTTTTCCTGTATTAGG ACAATTATGTCAACTTAGTCCTAGTGGATCTGTAGCTATATTCTGCACTTTCTTGCTTAT GCAACCTAGTTCAGGAAAAGTCTCCTGCTAATTATATGTTGCTATGCATTAGTTTCAGTT CTTATGCGAGAGTTCCTTTATATGTATGCTCTGATCTTACCTCTGTCTTCGAGTGCTCGT TCATCCTTCGGGAATGAAATAGTAACTAATTGTGATGCTTCATTGGATATGGAGATAGTG AAGGCCTGATCCTTACATAATAATGAGAATCATATCAAATCATACCTTCTTTTGTTATTC CTTAATTTTTGTTGGTCAACAGAAGAAAACTTCTCCATAAAGAATTGGTATAGAAGTTCT TCTGTCTGCTTCCTAGACAAAACACTACATTCTCTTTTGAAAAAAGAAAAAAAAAGCAAA ACTGTATGTGAAGATCAGTTTGGCCCTGACAGTGCACAGTTTGCTGTGCAGCATCTTAAG TAAAAAGGGCATTGCCGCACTGGAATGTGCACTTCATTTTTCTTAACTAAATATACACTT TGCGTAAGAGGGATTCTTATGGCCACTTTTGGGCTGCAGTGATACATAAAGCAGAGATGC ACACAGTTACCCAGAAAGAGAAGAATTGCTGAGACAGAGACAGAACCTGTGATCCATGAA CGTACTATACAGTTAGCAACTGGCGTTAAAATATAATTCCGCTTTACAATTTACCATTCT AGTTTTTAAAATATTTACAGAACTTGTAGGTACTAGAGAAGTCTAAATTACATTAAAAAA TTTGA