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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g025280.1.1
CDS Infomation

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT2G31160.1)
Sequence

ATGGATTCCTTTGTAGAAGTAGAGCCTTCCAACACCACCACCAATAACAACAACATTACA
TCATCATCATCTACCTCATCAAGTCGATATGAGAATCAGAAACGCCGTGATTGGAACACT
TTCGGTCAGTACCTTAAAAACCACAGACCACCACTCTCCCTCTCTCGTTGTAGTGGAGCT
CATGTCCTTGAATTCCTCCGTTACCTTGATCAATTTGGCAAAACTAAAATCCATACGCTG
ATATGTCCATTTTACGGTCTTCCAAATCCTCCAGCACCTTGTCCATGTCCTCTTCGTCAA
GCTTGGGGTAGCCTTGATGCACTTATTGGACGTCTTAGAGCTGCTTATGAAGAAAATGGT
GGAAATCCTGAAATGAACCCTTTTGGTACTCGTGCTGTTAGGCTTTATCTTCGCGAAGTT
CGCGATTTGCAATCAAAAGCAAGAGGTGTAAGCTATGAAAAGAAGAAAAGAAAACGACCA
TCACAACCATCACCACCACCATTACAATCGGGATGA

Peptide Sequence

PEP ID

Solyc09g025280.1.1
PEP Infomation

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT2G31160.1)
Sequence

MDSFVEVEPSNTTTNNNNITSSSSTSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGA
HVLEFLRYLDQFGKTKIHTLICPFYGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENG
GNPEMNPFGTRAVRLYLREVRDLQSKARGVSYEKKKRKRPSQPSPPPLQSG*

Transcript Sequence

Transcript ID

Solyc09g025280.1.1
Transcript Infomation

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT2G31160.1)
Sequence

ATGGATTCCTTTGTAGAAGTAGAGCCTTCCAACACCACCACCAATAACAACAACATTACA
TCATCATCATCTACCTCATCAAGTCGATATGAGAATCAGAAACGCCGTGATTGGAACACT
TTCGGTCAGTACCTTAAAAACCACAGACCACCACTCTCCCTCTCTCGTTGTAGTGGAGCT
CATGTCCTTGAATTCCTCCGTTACCTTGATCAATTTGGCAAAACTAAAATCCATACGCTG
ATATGTCCATTTTACGGTCTTCCAAATCCTCCAGCACCTTGTCCATGTCCTCTTCGTCAA
GCTTGGGGTAGCCTTGATGCACTTATTGGACGTCTTAGAGCTGCTTATGAAGAAAATGGT
GGAAATCCTGAAATGAACCCTTTTGGTACTCGTGCTGTTAGGCTTTATCTTCGCGAAGTT
CGCGATTTGCAATCAAAAGCAAGAGGTGTAAGCTATGAAAAGAAGAAAAGAAAACGACCA
TCACAACCATCACCACCACCATTACAATCGGGATGA