Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g018850.3.1
CDS Infomation

A/G-specific adenine DNA glycosylase (AHRD V3.3 *** W9QVM6_9ROSA)
Sequence

ATGCCAGTGACCATTTGCTTACATTTTGAAACGCATTGCTTAGCGGGAAATCTGAATAAG
CGGTACTCTGTATCAATGGAGGAGAAGAAAAGGGTGTTGATGTCCCTGAAAAGTAAGAAG
AGAGCTCGGCGTAGCAGAGAAATACCTCCAAAAGAAAGCGATGATATAGAGGACATCAGT
TTCTCTAAAGATGAAACCCTACAGATTAGGGCTTCTCTATTGGAATGGTATGATGAAAAT
CAAAGAGACCTTCCTTGGAGAAGAATCAGTGGTGGTTCTGATGAGAGAGATAAAAGGGGT
TATGCCGTCTGGGTTTCTGAAGTAATGCTTCAGCAAACTAGGGTTTCAACTGTCATTGAT
TATTTCAAACGCTGGATGAACAAATGGCCTACTCTTCATCATCTTGCTCAAGCTTCTCTT
GAGGAGGTGAATGAAATGTGGGCTGGTTTGGGGTATTATAGACGAGTTCGCTTCTTATTA
CAGGGTGCAAAAGAGGTGGTTGAAGAAGGAGGTAGTTTTCCAGAGACTGTTTCAGAACTT
CGCAAGATCAAAGGAATTGGTGAATACACTGCTGGTGCTATTGCCTCAATTGCCTTCAAA
AAGGTAGTACCTGTTGTTGATGGGAATGTGGTCAGGGTTATTTCTAGGCTGAAGGCCATA
TCAGCGAATCCAAAAGACACCGCGACAGTTAAGAGTTTTTGGAAACTTGCAGGACAATTA
GTTGATCCTTGTAGGCCTGGAGATTTCAACCAAGCTCTTATGGAACTTGGAGCTACGTTG
TGCTCTCTTTCGAATCCAGGTTGTGCTGTGTGCCCCATCTCTGCGCAATGTCATGCTTTG
TCGCTCTCTAGGCAGAACGAGTCAGTTCATGTTTCAGATTACCCAACAAAAGTTGTGAAG
GCCAAACAAAGGCATGAGTTTTCTGCTGTTAGTGTTGTAGAGATACTGGATTGCCAGGAA
ATGACGGGATCTCAATCCAACAGCAAATATATTCTTGTAAAAAGACCAAATGAGGGTCTA
CTTGCCGGCCTCTGGGAGTTTCCATCAATTCTCTTGGAGAAGGAAGCAGACCTGGCCTCG
AGAAGAAAAGCGATTGATAACTTTTTACAGTCGTCACTCAATCTGGATCTTAAAGAGTCT
ACTAGAATAGTTTCACGAGAAGATATTGGAGAATTTGTCCACGTCTTCAGTCATATACGC
CTCAAGATGTACGTAGAGTTATTGGTCTTACATCCAAAAGGTAATCGAAGCATCGAAGAC
GAAAAACTGGACAAAGAGAGTATTACATGGAAGTATGTTGATGGCAAAAACCTTGATAGC
ATGGGATTGACATCTGGAGTAAGAAAGGTTTATACCATGGTACAGAAACACAAGCAAACT
GAACAGGCTACCATCCCGGGAAGGAGGAGGAAGACAGCAGTAAGAAGATAG

Peptide Sequence

PEP ID

Solyc09g018850.3.1
PEP Infomation

A/G-specific adenine DNA glycosylase (AHRD V3.3 *** W9QVM6_9ROSA)
Sequence

MPVTICLHFETHCLAGNLNKRYSVSMEEKKRVLMSLKSKKRARRSREIPPKESDDIEDIS
FSKDETLQIRASLLEWYDENQRDLPWRRISGGSDERDKRGYAVWVSEVMLQQTRVSTVID
YFKRWMNKWPTLHHLAQASLEEVNEMWAGLGYYRRVRFLLQGAKEVVEEGGSFPETVSEL
RKIKGIGEYTAGAIASIAFKKVVPVVDGNVVRVISRLKAISANPKDTATVKSFWKLAGQL
VDPCRPGDFNQALMELGATLCSLSNPGCAVCPISAQCHALSLSRQNESVHVSDYPTKVVK
AKQRHEFSAVSVVEILDCQEMTGSQSNSKYILVKRPNEGLLAGLWEFPSILLEKEADLAS
RRKAIDNFLQSSLNLDLKESTRIVSREDIGEFVHVFSHIRLKMYVELLVLHPKGNRSIED
EKLDKESITWKYVDGKNLDSMGLTSGVRKVYTMVQKHKQTEQATIPGRRRKTAVRR*

Transcript Sequence

Transcript ID

Solyc09g018850.3.1
Transcript Infomation

A/G-specific adenine DNA glycosylase (AHRD V3.3 *** W9QVM6_9ROSA)
Sequence

CACGTGTAGAGAGGGAGAGAAATTTATAACACATATACAGAGAGAAATTTAACCAAAAAT
TAAAATAAAAACAAAGATAGACTATGCCAGTGACCATTTGCTTACATTTTGAAACGCATT
GCTTAGCGGGAAATCTGAATAAGCGGTACTCTGTATCAATGGAGGAGAAGAAAAGGGTGT
TGATGTCCCTGAAAAGTAAGAAGAGAGCTCGGCGTAGCAGAGAAATACCTCCAAAAGAAA
GCGATGATATAGAGGACATCAGTTTCTCTAAAGATGAAACCCTACAGATTAGGGCTTCTC
TATTGGAATGGTATGATGAAAATCAAAGAGACCTTCCTTGGAGAAGAATCAGTGGTGGTT
CTGATGAGAGAGATAAAAGGGGTTATGCCGTCTGGGTTTCTGAAGTAATGCTTCAGCAAA
CTAGGGTTTCAACTGTCATTGATTATTTCAAACGCTGGATGAACAAATGGCCTACTCTTC
ATCATCTTGCTCAAGCTTCTCTTGAGGAGGTGAATGAAATGTGGGCTGGTTTGGGGTATT
ATAGACGAGTTCGCTTCTTATTACAGGGTGCAAAAGAGGTGGTTGAAGAAGGAGGTAGTT
TTCCAGAGACTGTTTCAGAACTTCGCAAGATCAAAGGAATTGGTGAATACACTGCTGGTG
CTATTGCCTCAATTGCCTTCAAAAAGGTAGTACCTGTTGTTGATGGGAATGTGGTCAGGG
TTATTTCTAGGCTGAAGGCCATATCAGCGAATCCAAAAGACACCGCGACAGTTAAGAGTT
TTTGGAAACTTGCAGGACAATTAGTTGATCCTTGTAGGCCTGGAGATTTCAACCAAGCTC
TTATGGAACTTGGAGCTACGTTGTGCTCTCTTTCGAATCCAGGTTGTGCTGTGTGCCCCA
TCTCTGCGCAATGTCATGCTTTGTCGCTCTCTAGGCAGAACGAGTCAGTTCATGTTTCAG
ATTACCCAACAAAAGTTGTGAAGGCCAAACAAAGGCATGAGTTTTCTGCTGTTAGTGTTG
TAGAGATACTGGATTGCCAGGAAATGACGGGATCTCAATCCAACAGCAAATATATTCTTG
TAAAAAGACCAAATGAGGGTCTACTTGCCGGCCTCTGGGAGTTTCCATCAATTCTCTTGG
AGAAGGAAGCAGACCTGGCCTCGAGAAGAAAAGCGATTGATAACTTTTTACAGTCGTCAC
TCAATCTGGATCTTAAAGAGTCTACTAGAATAGTTTCACGAGAAGATATTGGAGAATTTG
TCCACGTCTTCAGTCATATACGCCTCAAGATGTACGTAGAGTTATTGGTCTTACATCCAA
AAGGTAATCGAAGCATCGAAGACGAAAAACTGGACAAAGAGAGTATTACATGGAAGTATG
TTGATGGCAAAAACCTTGATAGCATGGGATTGACATCTGGAGTAAGAAAGGTTTATACCA
TGGTACAGAAACACAAGCAAACTGAACAGGCTACCATCCCGGGAAGGAGGAGGAAGACAG
CAGTAAGAAGATAGAGATGGTACTGGCAGAGTGGCTGTGCCAAGAATACCTTAACTTGAC
CCTCAGGAATGGAAATTTAGGCATGAAGACATCATTGTGCAGGTGTTTGACAATTGGTGT
ATAACAGAACATACAGATGCTAAATTGTTGTATCTTACTGACATGTGTTTCCAAGCTCAG
TCTGCTTTATCAAGTGGATGTGTAACCAGTGCAAGCGGTTTCAGGGATCTAATGGTTGTA
AATAGTCTGCCTACAGGCATAGTTTCTTGGAACTTAATCTCTTTTGTTCCTTTTCACCAT
TTTGGTTGGTTTTCTTCTTTTAGATGTAAGGAATGGTAACCAGAAATTGATTTTTTTGAT
TAACTAAGTTACAACTTTTTCAATGAGAGCTCCTGCACCTCTTATTTATTTGGGTAAAAG
TAAGGCGGAATGACTTATTTATTTGGGCAAAAGTAAGGCGGAATGACCTAAGAGAGATGT
TCAAACTATGCTTGAAAGGATGAAGATGAACTGGAAATGAGAGAGGGAGAGATTTACGGT
GAAAAGGAGAAAAATGTTTTTCATCCATATTTGTACAATACAATGCTACTATCTATTTAT
ACACAACTAGCCGACTTAGAATAAAATATCTAACTCACTAACTCATCTTGTTTATTGTTA
ATTAACCAACTAACTAATTCTAAAGTTAGTTATAACTACTTTTATCATCTGGCATCTTAG
TTGGTAATTCCTGTACACTTCTA