Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g018030.3.1
CDS Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

ATGGAGGAAAAAACAGCAATTCATACAGTAATAAATGGAGTGCAGGCACTTGGAAGGGGT
TTTGATGTAAATTATGATACAAGGTTGTTATATTGTAAGGGAATGGGTGGGTCTAGGGTT
GTAGAAATTAATGAAGAAAATACAAGTGATCTTTGGTTATATGATGATGTTATTGTGCAA
AATGTTTCAAAAGATATTAGCAACTTTCAAGAATCTGTTGGACGCCATGGAACTAATGTT
TGCTCTTATAATGAGATGGTGGAATATTTTAATAAAAAGGCTAATCTACCAGGCCATGCT
CCTCTTGGTAGCTTCAATGTTGCATTCAGTTATACTGGTTCAAAGAATATAGATACCGCG
AGTACAAAGACGCTTTGTATGGATGGATTTTTCATACCACTTTCTAATCTTCAACTCATG
ACTTCCCCTCTTGTTTTACGGGACGACGTTAAAAGAGCTGTGCCAACATCGTGGGATCCG
CTAGCACTGGCAAGCTTCATTGAGAATTTTGGAACACATGTAATTACATCTGTAACTATC
GGTGGAAAGGATGTAATTTACGTTAAACAGCATATATCATCACCTCTATCCACAGTAGAA
ATAAAAAATTACGTTCAAGACATCGGAAATCAGAGATTCTCCAGCACAGGAAGCCTTACA
AGTTCAGGTTTATTGAAATACAAGGTTAATGCTAGTTCCATATATTTCTTTGCTGGTGAT
CCATCAATTTTCAATAATCAGGGGATATATCCGCAACCTACTAGTGCGCCATATATTCCC
GGAAATGGAAAAGAGGATGTTACAGTCAGTTGCAGAAGAAGGGGAGGGGATGATCTGGAA
CAAAGCCATACTCAATGGGCGCATACTATTAGATCTTCTCCAGACGTTATTGAGATGTCG
TTTGTTCCTATCATACTCCTCCTTGAAGGGGTTAAAGGGAGGGATTATTTGGCACGGGCT
ATAAGTCTTTATCTTGAATACAAACCTCAAATCGAGGAGCTTAGATATTTCTTAGAGTTT
CAGGTCCCGAGAGTATGGGCTCCTGTACATGACAAACTTCCTAATCAGCATAGAAAGGAA
CCTGTTTGCCCATCGCTTCAGTTTAGCATGATGGGGCAAAAGCTTTTTGTTAACCTTGAA
CAAGTGTCAGTGGGACGTAAGCCCGTGACCGGCTTGCAACTATATCTTGAAGGGTCGAAG
GTTAATCGACTATGCATCTATCTTCAGCATCTTGTTTCTCTTCCTAGGATCCTCCAACCA
TACTGGGAAAGTCATATAGCAATTGGGGCTCCAAAGTGGCAGGGTCCTGAAGAACAAGAC
AGTAGATGGTTCGAAGCAGTGAAATGGAAGAACTTCTCACATGTGAGTAGTGCACCAATT
GAGAGCCCGGAAACTTTCATAGGAGATCTTTCAGGTGTATACATAGTCACAGGAGCTCAG
CTTGGGGTCTGGGATTTTGGTTCGAGAAACGTCTTGTATATGAGGCTCTTGTATTCAAGG
CTACCGGGCTGCACTATTAGAAGATCGTTGTGGGATCACACCCCGAATGACAAGTTAAGG
AAACAGGCTGATAGCAATGGCAATGAAAGTTCAATTCCAGGACAGAATTTTATTGGCAAT
AAGTTGGCAAAATTTGTTGACATGACGGAGATGAGCAAGGGACCTCGAGATCCTCCGGGT
CATTGGGTTGTCACAGGTGGAAAACTTGGTGTTGATAAAGGGAAAATTGTTTTGAGATTG
AAGTATTCTTTGTTAAATTATTAG

Peptide Sequence

PEP ID

Solyc09g018030.3.1
PEP Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

MEEKTAIHTVINGVQALGRGFDVNYDTRLLYCKGMGGSRVVEINEENTSDLWLYDDVIVQ
NVSKDISNFQESVGRHGTNVCSYNEMVEYFNKKANLPGHAPLGSFNVAFSYTGSKNIDTA
STKTLCMDGFFIPLSNLQLMTSPLVLRDDVKRAVPTSWDPLALASFIENFGTHVITSVTI
GGKDVIYVKQHISSPLSTVEIKNYVQDIGNQRFSSTGSLTSSGLLKYKVNASSIYFFAGD
PSIFNNQGIYPQPTSAPYIPGNGKEDVTVSCRRRGGDDLEQSHTQWAHTIRSSPDVIEMS
FVPIILLLEGVKGRDYLARAISLYLEYKPQIEELRYFLEFQVPRVWAPVHDKLPNQHRKE
PVCPSLQFSMMGQKLFVNLEQVSVGRKPVTGLQLYLEGSKVNRLCIYLQHLVSLPRILQP
YWESHIAIGAPKWQGPEEQDSRWFEAVKWKNFSHVSSAPIESPETFIGDLSGVYIVTGAQ
LGVWDFGSRNVLYMRLLYSRLPGCTIRRSLWDHTPNDKLRKQADSNGNESSIPGQNFIGN
KLAKFVDMTEMSKGPRDPPGHWVVTGGKLGVDKGKIVLRLKYSLLNY*

Transcript Sequence

Transcript ID

Solyc09g018030.3.1
Transcript Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

ACACAAATTTATGTTTATGTATAGATAGGGTAAATGTTTTGTTTAGTCTTCATATTTTTT
TGAATTTTTTGTTTTGGATTGAAGCTAATTTTTGTTAATGGAGGAAAAAACAGCAATTCA
TACAGTAATAAATGGAGTGCAGGCACTTGGAAGGGGTTTTGATGTAAATTATGATACAAG
GTTGTTATATTGTAAGGGAATGGGTGGGTCTAGGGTTGTAGAAATTAATGAAGAAAATAC
AAGTGATCTTTGGTTATATGATGATGTTATTGTGCAAAATGTTTCAAAAGATATTAGCAA
CTTTCAAGAATCTGTTGGACGCCATGGAACTAATGTTTGCTCTTATAATGAGATGGTGGA
ATATTTTAATAAAAAGGCTAATCTACCAGGCCATGCTCCTCTTGGTAGCTTCAATGTTGC
ATTCAGTTATACTGGTTCAAAGAATATAGATACCGCGAGTACAAAGACGCTTTGTATGGA
TGGATTTTTCATACCACTTTCTAATCTTCAACTCATGACTTCCCCTCTTGTTTTACGGGA
CGACGTTAAAAGAGCTGTGCCAACATCGTGGGATCCGCTAGCACTGGCAAGCTTCATTGA
GAATTTTGGAACACATGTAATTACATCTGTAACTATCGGTGGAAAGGATGTAATTTACGT
TAAACAGCATATATCATCACCTCTATCCACAGTAGAAATAAAAAATTACGTTCAAGACAT
CGGAAATCAGAGATTCTCCAGCACAGGAAGCCTTACAAGTTCAGGTTTATTGAAATACAA
GGTTAATGCTAGTTCCATATATTTCTTTGCTGGTGATCCATCAATTTTCAATAATCAGGG
GATATATCCGCAACCTACTAGTGCGCCATATATTCCCGGAAATGGAAAAGAGGATGTTAC
AGTCAGTTGCAGAAGAAGGGGAGGGGATGATCTGGAACAAAGCCATACTCAATGGGCGCA
TACTATTAGATCTTCTCCAGACGTTATTGAGATGTCGTTTGTTCCTATCATACTCCTCCT
TGAAGGGGTTAAAGGGAGGGATTATTTGGCACGGGCTATAAGTCTTTATCTTGAATACAA
ACCTCAAATCGAGGAGCTTAGATATTTCTTAGAGTTTCAGGTCCCGAGAGTATGGGCTCC
TGTACATGACAAACTTCCTAATCAGCATAGAAAGGAACCTGTTTGCCCATCGCTTCAGTT
TAGCATGATGGGGCAAAAGCTTTTTGTTAACCTTGAACAAGTGTCAGTGGGACGTAAGCC
CGTGACCGGCTTGCAACTATATCTTGAAGGGTCGAAGGTTAATCGACTATGCATCTATCT
TCAGCATCTTGTTTCTCTTCCTAGGATCCTCCAACCATACTGGGAAAGTCATATAGCAAT
TGGGGCTCCAAAGTGGCAGGGTCCTGAAGAACAAGACAGTAGATGGTTCGAAGCAGTGAA
ATGGAAGAACTTCTCACATGTGAGTAGTGCACCAATTGAGAGCCCGGAAACTTTCATAGG
AGATCTTTCAGGTGTATACATAGTCACAGGAGCTCAGCTTGGGGTCTGGGATTTTGGTTC
GAGAAACGTCTTGTATATGAGGCTCTTGTATTCAAGGCTACCGGGCTGCACTATTAGAAG
ATCGTTGTGGGATCACACCCCGAATGACAAGTTAAGGAAACAGGCTGATAGCAATGGCAA
TGAAAGTTCAATTCCAGGACAGAATTTTATTGGCAATAAGTTGGCAAAATTTGTTGACAT
GACGGAGATGAGCAAGGGACCTCGAGATCCTCCGGGTCATTGGGTTGTCACAGGTGGAAA
ACTTGGTGTTGATAAAGGGAAAATTGTTTTGAGATTGAAGTATTCTTTGTTAAATTATTA
GTTAGAAAGGGAGAGATGGTGAATTATATTGGTGTTCTTGTGTACTCACTTTGTTTCAAC
CCCAATATAAGGCATTTCAGGAATCGACCTGATTCTATCTTTTTTTCTTACCGTTTGAAG
AAAGGAAGGATCCCAAAGAATTGGTCTTTTTTGTTGTTGTTGAATCTATATACTTGGTGG
TTTTGGATGGGTAAATTTCTCAAATTTTGCTGCACAACAGTCTTTTGTCTTGAAGT