Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g015670.3.1
CDS Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

ATGAAGGTAGGGTTTTTAGTGTGTATATTGTTTGTGATGTGTGGTTGTTGTATGGGAAGA
TTTGTGGTGGAGAAGAACAGCTTGAGAGTAACATCACCAGACTCAATTAAAGAGGTGTAT
GAGTGTGCAATTGGCAACTTTGGTGTACCACAGTATGGAGGAACTCTGGTTGGTAATGTC
ATGTACCCAAAATCTAATAAAAAATCATGCAATAATTTCTCAGATTTTGATATCTTCTAC
AAATCTAAGCCTGGTGGCAGACCTGTTTTCCTTCTTGTTGATAGAGGAGATTGCTTTTTC
ACACTGAAGGCTTGGAATGCTCAGCAAGCTGGAGCAGGTGCTATTCTTGTTGCTGATAAC
CGTGTTGAGCCTTTAATTACCATGGACACCCCTGAGGAAGAGGATGCAAAAGCAGATTAC
TTGCAAGATATAACTATTCCATCTGCTTTAATTAGCAAATCACTTGGGGATAGCATCAAG
AGGGAACTATCTAAAGGAGAATTGGTTAACATAAACCTCGATTGGAGAGAGGCTCTTCCA
CATCCCGACGATCGAGTGGAGTACGAATTTTGGACCAATAGTAATGATGAGTGTGGCCCC
AAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAGGGGGCTGCCCAGATACTTGAG
CAGAAAGGTTATACACAGTTTAGTCCCCATTACATAACTTGGTATTGCCCGGAAGCATTT
ATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGAAGGTACTGTGCTCCAGAC
CCTGAACAAGACTTCAGTAAAGGTTATGATGGAAAGGATGTTGTTTTGCAAAATTTACGT
CAAGCTTGCTTTTTTAAGGTTGCCAATGACAGTGGGAAACCCTGGTTGTGGTGGGATTAT
GTCACTGACTTTGCAATACGGTGTCCAATGAAAGAGAAGAAATACACAAAAGGATGTGCT
GATCAAGTAATCAAGTCACTTGGCTTTGACGTCAAACAGATTGAAAAATGTGTTGGAGAT
CCTGAAGCAGATACTGACAACCCTGTTCTAAAGGTCGAACAGGACATCCAGATAGGTAAG
GGTGCTCGTGGAGATGTGACTATCTTGCCAACTCTCGTTATAAACAATAGACAGTACAGA
GGTAAGCTGGACAAGGGAGCAGTCCTCAAGGCAATTTGTTCAGGTTTTGAGGAGACAACC
GAGCCTGCAATTTGTTTAACTGAAGAAATAGAAACAAATGAATGCTTAGAATCAAATGGT
GGGTGCTGGCAGGACGAGGCTGCTAATATTACAGCATGCCAGGATACTTTCCGTGGTAGA
GTATGTGAATGCCCAGTAGTTCAGGGAGTAAAATTTGTTGGTGATGGTTATACTCACTGT
GAACCATCTGGAGCATTGCGATGTGAAATAAACAATGGAGGCTGTTGGAAGGGAACCCAA
AATAGCAGGGCATATTCTGCTTGCATTGACGATCACACAAAGGGTTGCAAATGTCCACCA
GGATTCAAAGGCGATGGAGTTAACAGTTGTGAGGATATTGATGAATGCAAGGAGAAGTTG
GCTTGCCAGTGTGCTGAGTGCAAATGCAAGAACACTTGGGGTAGTTATGATTGCAGTTGC
AGCGCCAATTTGTTGTACATGCATGAACATGACACATGTATAAGCAAAGATGCCAAGTCA
GAGTTCAGCTGGGGCCTTGTTTGGACTATCATCTTGGGTTTGGCTGTTGCAGGGGTTTCG
GCATATGCTGTGTACAAGTATAGAATCCGGAGATACATGGACTCAGAGATTCGTGCTATC
ATGGCACAATATATGCCTTTGGGTCAAGGAGAGGGAGCTACTAATGTCCCCCACGGGAAC
GTCTAA

Peptide Sequence

PEP ID

Solyc09g015670.3.1
PEP Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

MKVGFLVCILFVMCGCCMGRFVVEKNSLRVTSPDSIKEVYECAIGNFGVPQYGGTLVGNV
MYPKSNKKSCNNFSDFDIFYKSKPGGRPVFLLVDRGDCFFTLKAWNAQQAGAGAILVADN
RVEPLITMDTPEEEDAKADYLQDITIPSALISKSLGDSIKRELSKGELVNINLDWREALP
HPDDRVEYEFWTNSNDECGPKCESQREFVKNFKGAAQILEQKGYTQFSPHYITWYCPEAF
ILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVLQNLRQACFFKVANDSGKPWLWWDY
VTDFAIRCPMKEKKYTKGCADQVIKSLGFDVKQIEKCVGDPEADTDNPVLKVEQDIQIGK
GARGDVTILPTLVINNRQYRGKLDKGAVLKAICSGFEETTEPAICLTEEIETNECLESNG
GCWQDEAANITACQDTFRGRVCECPVVQGVKFVGDGYTHCEPSGALRCEINNGGCWKGTQ
NSRAYSACIDDHTKGCKCPPGFKGDGVNSCEDIDECKEKLACQCAECKCKNTWGSYDCSC
SANLLYMHEHDTCISKDAKSEFSWGLVWTIILGLAVAGVSAYAVYKYRIRRYMDSEIRAI
MAQYMPLGQGEGATNVPHGNV*

Transcript Sequence

Transcript ID

Solyc09g015670.3.1
Transcript Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

TCTTACGTAGTTTAAATATTGACAAAAACAAATATGTGTCTGTGATAATAGTTTAGTTTT
CTTATATATACACGTAGCTTCCTCAATTTAGCACATTTTACACGTCTCATAGTGTTTTGG
TGATTACCATTACATCCCTTTTGTATTTTCTTCCCTTTACTTGTTCAAAGACTGGAGCTT
TTTGATAGTATTAATTGATTATTCACCTGAATGTTTTGATCTGGGTGATATCAAGATTTG
ATTTTTCATGTAAATTTGCAGTTTTTAGAGGTTTAGCTGATCTGGGTCATCTTTATTTTT
CTCCATCTGAGGGAGGAAGTGAAGATGAAGGTAGGGTTTTTAGTGTGTATATTGTTTGTG
ATGTGTGGTTGTTGTATGGGAAGATTTGTGGTGGAGAAGAACAGCTTGAGAGTAACATCA
CCAGACTCAATTAAAGAGGTGTATGAGTGTGCAATTGGCAACTTTGGTGTACCACAGTAT
GGAGGAACTCTGGTTGGTAATGTCATGTACCCAAAATCTAATAAAAAATCATGCAATAAT
TTCTCAGATTTTGATATCTTCTACAAATCTAAGCCTGGTGGCAGACCTGTTTTCCTTCTT
GTTGATAGAGGAGATTGCTTTTTCACACTGAAGGCTTGGAATGCTCAGCAAGCTGGAGCA
GGTGCTATTCTTGTTGCTGATAACCGTGTTGAGCCTTTAATTACCATGGACACCCCTGAG
GAAGAGGATGCAAAAGCAGATTACTTGCAAGATATAACTATTCCATCTGCTTTAATTAGC
AAATCACTTGGGGATAGCATCAAGAGGGAACTATCTAAAGGAGAATTGGTTAACATAAAC
CTCGATTGGAGAGAGGCTCTTCCACATCCCGACGATCGAGTGGAGTACGAATTTTGGACC
AATAGTAATGATGAGTGTGGCCCCAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTC
AAGGGGGCTGCCCAGATACTTGAGCAGAAAGGTTATACACAGTTTAGTCCCCATTACATA
ACTTGGTATTGCCCGGAAGCATTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAAC
CATGGAAGGTACTGTGCTCCAGACCCTGAACAAGACTTCAGTAAAGGTTATGATGGAAAG
GATGTTGTTTTGCAAAATTTACGTCAAGCTTGCTTTTTTAAGGTTGCCAATGACAGTGGG
AAACCCTGGTTGTGGTGGGATTATGTCACTGACTTTGCAATACGGTGTCCAATGAAAGAG
AAGAAATACACAAAAGGATGTGCTGATCAAGTAATCAAGTCACTTGGCTTTGACGTCAAA
CAGATTGAAAAATGTGTTGGAGATCCTGAAGCAGATACTGACAACCCTGTTCTAAAGGTC
GAACAGGACATCCAGATAGGTAAGGGTGCTCGTGGAGATGTGACTATCTTGCCAACTCTC
GTTATAAACAATAGACAGTACAGAGGTAAGCTGGACAAGGGAGCAGTCCTCAAGGCAATT
TGTTCAGGTTTTGAGGAGACAACCGAGCCTGCAATTTGTTTAACTGAAGAAATAGAAACA
AATGAATGCTTAGAATCAAATGGTGGGTGCTGGCAGGACGAGGCTGCTAATATTACAGCA
TGCCAGGATACTTTCCGTGGTAGAGTATGTGAATGCCCAGTAGTTCAGGGAGTAAAATTT
GTTGGTGATGGTTATACTCACTGTGAACCATCTGGAGCATTGCGATGTGAAATAAACAAT
GGAGGCTGTTGGAAGGGAACCCAAAATAGCAGGGCATATTCTGCTTGCATTGACGATCAC
ACAAAGGGTTGCAAATGTCCACCAGGATTCAAAGGCGATGGAGTTAACAGTTGTGAGGAT
ATTGATGAATGCAAGGAGAAGTTGGCTTGCCAGTGTGCTGAGTGCAAATGCAAGAACACT
TGGGGTAGTTATGATTGCAGTTGCAGCGCCAATTTGTTGTACATGCATGAACATGACACA
TGTATAAGCAAAGATGCCAAGTCAGAGTTCAGCTGGGGCCTTGTTTGGACTATCATCTTG
GGTTTGGCTGTTGCAGGGGTTTCGGCATATGCTGTGTACAAGTATAGAATCCGGAGATAC
ATGGACTCAGAGATTCGTGCTATCATGGCACAATATATGCCTTTGGGTCAAGGAGAGGGA
GCTACTAATGTCCCCCACGGGAACGTCTAATGATAGACCATTACTGAAGAGTGATGATGG
CTTGGGTAGAATGCAGCCTTCACTGGGGATGTCTGCCACCAGTTAGTCAGCCTTAAGTTC
TTTGTGCCGATCATCATCGAAACAAATTACATCTTATTTATGTACATGTATGTCCCAACA
ATGCACATAAACCAAATAAAAGGAATTGTCCTTGAATTGGATTTGCGCATGATGTTTTAC
TTTTAATAATAAGGAAATGCGCAATATCAGTTTGTATTCCACTTGAGAGCATTTTGTATT
GCTCCAATATGGTATATGAAGATTAATTTTGATTTTCCAACAGCAGAATGTTATATACCA
ATTGTCAGATAGGGCCACTGCCACTGTGTTCTCAATCGGCACGTTGAAGATTTGATGGCT
GATCACATTTGAACTTTTGACCTCTGCATGACAAGTTTTGTAATCGAAGAAGTTGACTTT
ATACC